MELO3C033449 (gene) Melon (DHL92) v4

Overview
NameMELO3C033449
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr08: 27915896 .. 27916117 (-)
RNA-Seq ExpressionMELO3C033449
SyntenyMELO3C033449
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTAAAGCCTCACACTATGCCTTCCAAACACTTCTCCATTGTTCATCAACCTCGAGCTCTACAAGTTGGATTCCTCCACTTACTTCGTAAAAGACCTAACCCTACTCTCACCCAATCGCACCCAAAAGAACATGCTTCGCAAAGACTTATGTATCAAGGGAGTCTTCTCTCCCAATTTACACAATCGCTCCTTGGTACCATCCAGAGAGCTAATTAA

mRNA sequence

ATGGAATTAAAGCCTCACACTATGCCTTCCAAACACTTCTCCATTGTTCATCAACCTCGAGCTCTACAAGTTGGATTCCTCCACTTACTTCGTAAAAGACCTAACCCTACTCTCACCCAATCGCACCCAAAAGAACATGCTTCGCAAAGACTTATGTATCAAGGGAGTCTTCTCTCCCAATTTACACAATCGCTCCTTGGTACCATCCAGAGAGCTAATTAA

Coding sequence (CDS)

ATGGAATTAAAGCCTCACACTATGCCTTCCAAACACTTCTCCATTGTTCATCAACCTCGAGCTCTACAAGTTGGATTCCTCCACTTACTTCGTAAAAGACCTAACCCTACTCTCACCCAATCGCACCCAAAAGAACATGCTTCGCAAAGACTTATGTATCAAGGGAGTCTTCTCTCCCAATTTACACAATCGCTCCTTGGTACCATCCAGAGAGCTAATTAA

Protein sequence

MELKPHTMPSKHFSIVHQPRALQVGFLHLLRKRPNPTLTQSHPKEHASQRLMYQGSLLSQFTQSLLGTIQRAN
Homology
[Close]
BLAST of MELO3C033449 vs. NCBI nr
Match: XP_004140606.1 (uncharacterized protein LOC101214238 [Cucumis sativus] >KGN46577.1 hypothetical protein Csa_005688 [Cucumis sativus])

HSP 1 Score: 63.9 bits (154), Expect = 6.5e-07
Identity = 33/48 (68.75%), Postives = 35/48 (72.92%), Query Frame = 0 

Query: 1  MELKPHTMPSKHFSIVHQPRALQVGFLHLLRKRPNPTLTQSHPKEHAS 49
          ME K  TMPSK  S+VHQPRALQ GF HL  KRP  TL Q HP+EHAS
Sbjct: 1  MESKLRTMPSKRSSVVHQPRALQAGF-HLPCKRPKTTLPQPHPEEHAS 47

[Close]
BLAST of MELO3C033449 vs. NCBI nr
Match: TYK14010.1 (uncharacterized protein E5676_scaffold268G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 2.7e-05
Identity = 30/48 (62.50%), Postives = 32/48 (66.67%), Query Frame = 0 

Query: 1  MELKPHTMPSKHFSIVHQPRALQVGFLHLLRKRPNPTLTQSHPKEHAS 49
          ME K  TMPSK  SI+H PRALQ G LHL  KR   TL Q H +EHAS
Sbjct: 1  MESKLRTMPSKRSSILHHPRALQAGLLHLPHKRLKTTLPQPHLEEHAS 48

[Close]
BLAST of MELO3C033449 vs. ExPASy TrEMBL
Match: A0A0A0KDW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109720 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-07
Identity = 33/48 (68.75%), Postives = 35/48 (72.92%), Query Frame = 0 

Query: 1  MELKPHTMPSKHFSIVHQPRALQVGFLHLLRKRPNPTLTQSHPKEHAS 49
          ME K  TMPSK  S+VHQPRALQ GF HL  KRP  TL Q HP+EHAS
Sbjct: 1  MESKLRTMPSKRSSVVHQPRALQAGF-HLPCKRPKTTLPQPHPEEHAS 47

[Close]
BLAST of MELO3C033449 vs. ExPASy TrEMBL
Match: A0A5D3CRI8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold268G00070 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-05
Identity = 30/48 (62.50%), Postives = 32/48 (66.67%), Query Frame = 0 

Query: 1  MELKPHTMPSKHFSIVHQPRALQVGFLHLLRKRPNPTLTQSHPKEHAS 49
          ME K  TMPSK  SI+H PRALQ G LHL  KR   TL Q H +EHAS
Sbjct: 1  MESKLRTMPSKRSSILHHPRALQAGLLHLPHKRLKTTLPQPHLEEHAS 48

The following BLAST results are available for this feature:
BLAST of MELO3C033449 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140606.16.5e-0768.75uncharacterized protein LOC101214238 [Cucumis sativus] >KGN46577.1 hypothetical ... [more]
TYK14010.12.7e-0562.50uncharacterized protein E5676_scaffold268G00070 [Cucumis melo var. makuwa][more]
BLAST of MELO3C033449 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033449 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDW73.1e-0768.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109720 PE=4 SV=1[more]
A0A5D3CRI81.3e-0562.50Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C033449 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033449.1MELO3C033449.1mRNA