MELO3C033433.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C033433.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	CACTA en-spm transposon protein
Location	chr08: 27362991 .. 27364309 (-)
RNA-Seq Expression	MELO3C033433.jh1
Synteny	MELO3C033433.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGATCGCCCCTAACGTGGAGAAGCCCATTTTCCCATACATCGTTCGCTTCAGCCAGGGGATAGATGTGTGTGTGCAAAAGACATTTCTGGTCCGTTACCTTAAGTGGAGGGACGTTGGCAGAGAATACATTGAGGTCGTCAAGGCTGACCTCCAGGTAATTAAGTCCACTACACATTTATGATTTCATTTGAAAAATATTTAAGTTAACCAAGTTAATGTGTTATTTTTGTAATGTGTAGCGGTTTTTTGTGCATGATTTCAATAATCAAGCAATAAATAGGTTCGTTGAGCATCAAGTGCTTAGCACCTTTAAAGAGTTCTGGGACGACTGTCATAGACACTTCAAAAAGTACACCAACCCTGAGGAGGCTCGTGCCAACCCATCAAACCTATTGGTGAGACGTGATGAGGATTGACACTTCCTCTGTGACCATTACACGAGCCATGCATTCCAGATGAACAAGTGAACCATTTGTCATGGTTAATTATGATTTTAACTTTTAATATGTATAAGAAATAAATAATATAATCATTTTCATGCAAGAGCAATCACGGACGAACAAGACTGCTAGATAGAAGCAACCTTATAATCATAGCAGCGGGTTAAAATCATTTCTACAATGACAGCATGAGCTCGTTGAGCAAAGAGGGGAGTCGATCGACCGTGTAGAGTTGTTTCGAGAAACACACGTCTGATCTAAGACGTTCGTGTTGCAGGCTGCAGAGGATGTGCATGTAAGTTATCGAAGCAATACTTATGCACCCTTATTAATTGTCCTCTTTGATAATATATTTTTTACTTACTAACTTAGTTTTTAAATTTGTTGCAGAATCAAATGCTGAAACTCTAGTCTCAACCTACCTCAGAGGGTAGTCAGCCACTCTCAGAGGATGAGATATGCTATCAGGTGTTGGGTAGACGACCAGGCTTAAAAGCCTTGGTTGGGGAACCAAGTCGAAAGCCCGCAAGACGACAAGTGCGAGCAGTTCCTAGACGTCATGTTTGTAATCCACAGAAAGAGAGATTTAATTATAAGCTACATTTGATCAAGCTTTGGAAAGGATTGAAGAGCAGACAAGAAATCACCAAGCGTTAGCTTCTGAAGTGGAACAAATACGAAAGCTGATACAAGACATAACTCGGGCACAACAAAGATCACCACATGATCCCTAGCTTTATGGTACGTATATATGTTTCCATTATTCTTAAGTTTTTGAAATGACAGTGATGATATGGATATATATGTATTAAACTTAGCCACTTTTGTATCATTGTAGGACCCTCGGTGTAGAATGGCGTACGAGGCTCGTTAG

mRNA sequence

ATGACGATCGCCCCTAACGTGGAGAAGCCCATTTTCCCATACATCGTTCGCTTCAGCCAGGGGATAGATGTGGACGTTGGCAGAGAATACATTGAGGTCGTCAAGGCTGACCTCCAGCGGTTTTTTGTGCATGATTTCAATAATCAAGCAATAAATAGGTTCGTTGAGCATCAAGTGCTTAGCACCTTTAAAGAGTTCTGGGACGACTGTCATAGACACTTCAAAAAGTACACCAACCCTGAGGAGGCTCGTGCCAACCCATCAAACCTATTGTCTCAACCTACCTCAGAGGGTAGTCAGCCACTCTCAGAGGATGAGATATGCTATCAGGTGTTGGGTAGACGACCAGGCTTAAAAGCCTTGGTTGGGGAACCAAGTCGAAAGCCCGCAAGACGACAAGTGCGAGCAGTTCCTAGACGTCATGTTTAATGGCGTACGAGGCTCGTTAG

Coding sequence (CDS)

ATGACGATCGCCCCTAACGTGGAGAAGCCCATTTTCCCATACATCGTTCGCTTCAGCCAGGGGATAGATGTGGACGTTGGCAGAGAATACATTGAGGTCGTCAAGGCTGACCTCCAGCGGTTTTTTGTGCATGATTTCAATAATCAAGCAATAAATAGGTTCGTTGAGCATCAAGTGCTTAGCACCTTTAAAGAGTTCTGGGACGACTGTCATAGACACTTCAAAAAGTACACCAACCCTGAGGAGGCTCGTGCCAACCCATCAAACCTATTGTCTCAACCTACCTCAGAGGGTAGTCAGCCACTCTCAGAGGATGAGATATGCTATCAGGTGTTGGGTAGACGACCAGGCTTAAAAGCCTTGGTTGGGGAACCAAGTCGAAAGCCCGCAAGACGACAAGTGCGAGCAGTTCCTAGACGTCATGTT

Protein sequence

MTIAPNVEKPIFPYIVRFSQGIDVDVGREYIEVVKADLQRFFVHDFNNQAINRFVEHQVLSTFKEFWDDCHRHFKKYTNPEEARANPSNLLSQPTSEGSQPLSEDEICYQVLGRRPGLKALVGEPSRKPARRQVRAVPRRHV

Homology

[Close]

BLAST of MELO3C033433.jh1 vs. NCBI nr
Match: TYK09799.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 180 bits (457), Expect = 1.74e-53
Identity = 87/105 (82.86%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   MTIAPNVEKPIFPYIVRFSQGIDV--------------DVGREYIEVVKADLQRFFVHDF 60
           MTIAPNVEKPIFPY++RFSQGI V              DVGREYIEVVKADLQRFFVHDF
Sbjct: 183 MTIAPNVEKPIFPYVIRFSQGIGVCVQKTFLVSYLKWRDVGREYIEVVKADLQRFFVHDF 242

Query: 61  NNQAINRFVEHQVLSTFKEFWDDCHRHFKKYTNPEEARANPSNLL 91
           +NQAINRFVEHQVLSTFKEFWDDCHRHFKKYTNPEEARANPSNLL
Sbjct: 243 SNQAINRFVEHQVLSTFKEFWDDCHRHFKKYTNPEEARANPSNLL 287

[Close]

BLAST of MELO3C033433.jh1 vs. NCBI nr
Match: KAA0025458.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 175 bits (443), Expect = 1.27e-49
Identity = 99/188 (52.66%), Postives = 109/188 (57.98%), Query Frame = 0


Query: 1   MTIAPNVEKPIFPYIVRFSQGIDV--------------DVGREYIEVVKADLQRFFVHDF 60
           MTIAP  EKPI P+ VRFSQ I V              DVGREYIEVVK DLQR FV DF
Sbjct: 213 MTIAPGAEKPISPHAVRFSQAIGVCVRKTFLICCLKWTDVGREYIEVVKGDLQRLFVLDF 272

Query: 61  NNQAINRFVEHQVLSTFKEFWDDCHRHFKKYTNPEEARANPSNLL--------------- 120
           N+QA+NRFVEHQ+L+TFKEFW DCHRHFKKY++PEEARANP N L               
Sbjct: 273 NDQAMNRFVEHQMLTTFKEFWTDCHRHFKKYSDPEEARANPPNALVGREPVDHVELFRET 332

Query: 121 -----------------------SQPTSEGSQPLSEDEICYQVLGRRPGLKALVGEPSRK 136
                                  SQPT EGSQPLS+DEIC  VLGRRPG    +G   + 
Sbjct: 333 HVRAGTFVSQAAEDAHNQMLELQSQPTPEGSQPLSKDEICDPVLGRRPGYSKGLGWGPKP 392

[Close]

BLAST of MELO3C033433.jh1 vs. NCBI nr
Match: KAA0037415.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYJ97499.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 166 bits (421), Expect = 6.44e-49
Identity = 91/154 (59.09%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 4   APNVEKPIFPYIVRFSQGID--------------VDVGREYIEVVKADLQRFFVHDFNNQ 63
           AP+ EK I PY VRF+Q I               VDVGREYIEVVK DLQRFFV D N+Q
Sbjct: 44  APSAEKLISPYAVRFNQTIGICVRKRFPVRCLKWVDVGREYIEVVKGDLQRFFVLDLNDQ 103

Query: 64  AINRFVEHQVLSTFKEFWDDCHRHFKKYTNPEEARANPSNLL-------SQPTSEGSQPL 123
           A+NRFVEHQ+L+TFKEF  DCHRHFKKY +PEEARANP N+L       SQPT EG++ L
Sbjct: 104 AMNRFVEHQMLTTFKEFQADCHRHFKKYNDPEEARANPPNILNQMLELQSQPTLEGNRLL 163

Query: 124 SEDEICYQVLGRRPGLKALVGEPSRKPARRQVRA 136
           S DEIC QVLGRRPG    +G   +  AR+   A
Sbjct: 164 SGDEICDQVLGRRPGYSKGLGWGPKPKARKTTSA 197

[Close]

BLAST of MELO3C033433.jh1 vs. NCBI nr
Match: TYK11065.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 167 bits (422), Expect = 5.99e-48
Identity = 97/193 (50.26%), Postives = 108/193 (55.96%), Query Frame = 0


Query: 1   MTIAPNVEKPIFPYIVRFSQGIDV--------------DVGREYIEVVKADLQRFFVHDF 60
           MTIAP  EKPI P+ +RFSQ I V              DVGREYIEVVK DLQR F+ DF
Sbjct: 63  MTIAPGAEKPISPHTIRFSQAIGVCVRKTFSVRCLKWADVGREYIEVVKGDLQRLFMLDF 122

Query: 61  NNQAINRFVEHQVLSTFKEFWDDCHRHFKKYTNPEEARANPSNLL--------------- 120
           N+QA+NRFVEHQ+L+TFKEF  DCHRHFKKY++PEEARANP N L               
Sbjct: 123 NDQAMNRFVEHQMLTTFKEFQADCHRHFKKYSDPEEARANPPNALYELTERKGELVDRVE 182

Query: 121 ----------------------------SQPTSEGSQPLSEDEICYQVLGRRPGLKALVG 136
                                       SQPT E SQPLSEDEIC QVLGRRPG    +G
Sbjct: 183 LFWVTHVRAGTFVSQATEDAHNQMLELQSQPTPERSQPLSEDEICDQVLGRRPGYSKGLG 242

[Close]

BLAST of MELO3C033433.jh1 vs. NCBI nr
Match: KAA0053181.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 166 bits (420), Expect = 6.28e-47
Identity = 95/189 (50.26%), Postives = 108/189 (57.14%), Query Frame = 0


Query: 1   MTIAPNVEKPIFPYIVRFSQGIDV--------------DVGREYIEVVKADLQRFFVHDF 60
           MTIAP  +KPI P+ VRF+Q I V              DVGREYI+VVK DLQR FV DF
Sbjct: 130 MTIAPGTKKPISPHTVRFNQAIGVCVRKTFPVRCLKWADVGREYIKVVKGDLQRLFVLDF 189

Query: 61  NNQAINRFVEHQVLSTFKEFWDDCHRHFKKYTNPEEARANPSNLL--------------- 120
           N+QA+NRFVEHQ+L+TFKEF  DCHRHFKKY++PEEARANP N L               
Sbjct: 190 NDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALYELAERRGQSVDRVE 249

Query: 121 ----------------------------SQPTSEGSQPLSEDEICYQVLGRRPGLKALVG 132
                                       SQPT EGSQPLSEDEIC QVLGRRPG    +G
Sbjct: 250 LFRETHVRAGTFVSQVAEDAHNQMLELQSQPTPEGSQPLSEDEICDQVLGRRPGYSKGIG 309

[Close]

BLAST of MELO3C033433.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CHQ3 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00950 PE=4 SV=1)

HSP 1 Score: 180 bits (457), Expect = 8.45e-54
Identity = 87/105 (82.86%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   MTIAPNVEKPIFPYIVRFSQGIDV--------------DVGREYIEVVKADLQRFFVHDF 60
           MTIAPNVEKPIFPY++RFSQGI V              DVGREYIEVVKADLQRFFVHDF
Sbjct: 183 MTIAPNVEKPIFPYVIRFSQGIGVCVQKTFLVSYLKWRDVGREYIEVVKADLQRFFVHDF 242

Query: 61  NNQAINRFVEHQVLSTFKEFWDDCHRHFKKYTNPEEARANPSNLL 91
           +NQAINRFVEHQVLSTFKEFWDDCHRHFKKYTNPEEARANPSNLL
Sbjct: 243 SNQAINRFVEHQVLSTFKEFWDDCHRHFKKYTNPEEARANPSNLL 287

[Close]

BLAST of MELO3C033433.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SH41 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00560 PE=4 SV=1)

HSP 1 Score: 175 bits (443), Expect = 6.14e-50
Identity = 99/188 (52.66%), Postives = 109/188 (57.98%), Query Frame = 0


Query: 1   MTIAPNVEKPIFPYIVRFSQGIDV--------------DVGREYIEVVKADLQRFFVHDF 60
           MTIAP  EKPI P+ VRFSQ I V              DVGREYIEVVK DLQR FV DF
Sbjct: 213 MTIAPGAEKPISPHAVRFSQAIGVCVRKTFLICCLKWTDVGREYIEVVKGDLQRLFVLDF 272

Query: 61  NNQAINRFVEHQVLSTFKEFWDDCHRHFKKYTNPEEARANPSNLL--------------- 120
           N+QA+NRFVEHQ+L+TFKEFW DCHRHFKKY++PEEARANP N L               
Sbjct: 273 NDQAMNRFVEHQMLTTFKEFWTDCHRHFKKYSDPEEARANPPNALVGREPVDHVELFRET 332

Query: 121 -----------------------SQPTSEGSQPLSEDEICYQVLGRRPGLKALVGEPSRK 136
                                  SQPT EGSQPLS+DEIC  VLGRRPG    +G   + 
Sbjct: 333 HVRAGTFVSQAAEDAHNQMLELQSQPTPEGSQPLSKDEICDPVLGRRPGYSKGLGWGPKP 392

[Close]

BLAST of MELO3C033433.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BEL9 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00040 PE=4 SV=1)

HSP 1 Score: 166 bits (421), Expect = 3.12e-49
Identity = 91/154 (59.09%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 4   APNVEKPIFPYIVRFSQGID--------------VDVGREYIEVVKADLQRFFVHDFNNQ 63
           AP+ EK I PY VRF+Q I               VDVGREYIEVVK DLQRFFV D N+Q
Sbjct: 44  APSAEKLISPYAVRFNQTIGICVRKRFPVRCLKWVDVGREYIEVVKGDLQRFFVLDLNDQ 103

Query: 64  AINRFVEHQVLSTFKEFWDDCHRHFKKYTNPEEARANPSNLL-------SQPTSEGSQPL 123
           A+NRFVEHQ+L+TFKEF  DCHRHFKKY +PEEARANP N+L       SQPT EG++ L
Sbjct: 104 AMNRFVEHQMLTTFKEFQADCHRHFKKYNDPEEARANPPNILNQMLELQSQPTLEGNRLL 163

Query: 124 SEDEICYQVLGRRPGLKALVGEPSRKPARRQVRA 136
           S DEIC QVLGRRPG    +G   +  AR+   A
Sbjct: 164 SGDEICDQVLGRRPGYSKGLGWGPKPKARKTTSA 197

[Close]

BLAST of MELO3C033433.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CHQ4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00510 PE=4 SV=1)

HSP 1 Score: 167 bits (422), Expect = 2.90e-48
Identity = 97/193 (50.26%), Postives = 108/193 (55.96%), Query Frame = 0


Query: 1   MTIAPNVEKPIFPYIVRFSQGIDV--------------DVGREYIEVVKADLQRFFVHDF 60
           MTIAP  EKPI P+ +RFSQ I V              DVGREYIEVVK DLQR F+ DF
Sbjct: 63  MTIAPGAEKPISPHTIRFSQAIGVCVRKTFSVRCLKWADVGREYIEVVKGDLQRLFMLDF 122

Query: 61  NNQAINRFVEHQVLSTFKEFWDDCHRHFKKYTNPEEARANPSNLL--------------- 120
           N+QA+NRFVEHQ+L+TFKEF  DCHRHFKKY++PEEARANP N L               
Sbjct: 123 NDQAMNRFVEHQMLTTFKEFQADCHRHFKKYSDPEEARANPPNALYELTERKGELVDRVE 182

Query: 121 ----------------------------SQPTSEGSQPLSEDEICYQVLGRRPGLKALVG 136
                                       SQPT E SQPLSEDEIC QVLGRRPG    +G
Sbjct: 183 LFWVTHVRAGTFVSQATEDAHNQMLELQSQPTPERSQPLSEDEICDQVLGRRPGYSKGLG 242

[Close]

BLAST of MELO3C033433.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UI17 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1192G00020 PE=4 SV=1)

HSP 1 Score: 166 bits (420), Expect = 3.04e-47
Identity = 95/189 (50.26%), Postives = 108/189 (57.14%), Query Frame = 0


Query: 1   MTIAPNVEKPIFPYIVRFSQGIDV--------------DVGREYIEVVKADLQRFFVHDF 60
           MTIAP  +KPI P+ VRF+Q I V              DVGREYI+VVK DLQR FV DF
Sbjct: 130 MTIAPGTKKPISPHTVRFNQAIGVCVRKTFPVRCLKWADVGREYIKVVKGDLQRLFVLDF 189

Query: 61  NNQAINRFVEHQVLSTFKEFWDDCHRHFKKYTNPEEARANPSNLL--------------- 120
           N+QA+NRFVEHQ+L+TFKEF  DCHRHFKKY++PEEARANP N L               
Sbjct: 190 NDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALYELAERRGQSVDRVE 249

Query: 121 ----------------------------SQPTSEGSQPLSEDEICYQVLGRRPGLKALVG 132
                                       SQPT EGSQPLSEDEIC QVLGRRPG    +G
Sbjct: 250 LFRETHVRAGTFVSQVAEDAHNQMLELQSQPTPEGSQPLSEDEICDQVLGRRPGYSKGIG 309

The following BLAST results are available for this feature:

BLAST of MELO3C033433.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK09799.1	1.74e-53	82.86	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0025458.1	1.27e-49	52.66	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0037415.1	6.44e-49	59.09	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYJ97499.1 CACTA en-...	[more]
TYK11065.1	5.99e-48	50.26	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0053181.1	6.28e-47	50.26	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C033433.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C033433.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CHQ3	8.45e-54	82.86	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7SH41	6.14e-50	52.66	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3BEL9	3.12e-49	59.09	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3CHQ4	2.90e-48	50.26	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7UI17	3.04e-47	50.26	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of MELO3C033433.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033433.jh1.t1	MELO3C033433.jh1.t1	mRNA