MELO3C033364 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033364
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Retrotransposon protein
Location	chr08: 21404879 .. 21406021 (+)
RNA-Seq Expression	MELO3C033364
Synteny	MELO3C033364

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTATTTTGAATGTATTGGTTACGCAAGTAAATTACTGCCAAACTGTTTTTCAGTAGAAGTTGATTGTACTATGAAACTAATCGTATGTATGTTATTTAATCATAGGAAAATTAATGAAACTAATATGTTTGTGTTTGACTTCTAACATGACAAGTTCATCGAGACTACCTAAACACAGTTAGACTAAAGAGGAAGAGGCAGGCCTCGTGGAGTGCCTCGTGGAGTTGGTCAATGGTGGTGGGTGGAGGTCCGACAACGGGACCTTTCACCCCGGGTACTTAAATCAGCTGGCGAGAGTGATGGCCTTCAAGATCCTAGGTTGTAATATCCATGCTTCAACCATCGATGGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCGGAGATGCGTGGCCCAATGTGTAGTGGTTTTGGGTGGAATGATGAAAAAAATGCATCGTCGTAGAGAAAGAAGTCTTTGACGATTGGGTCAAGGTGCGTTACTAGTCATTTGAACACTTACTGTACTATATTTCAATAAATGGACTAACAATTTATTATTGCACTTATACAGAGTCATCCGGCAGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCATTATGACGAACTGTCTTACGTGTTTGGTAAAGATCGTGCAACAGAAGGTCGGGCCGAGAGTTTTGCGAACAATGGATCGAACGATCTTGCTGGGTATGATGCATTTATCGCTGACGCTGCGCCGGATATGGATTTCCCGCCAATGTACAGTCAGGGATTGAACATGTCGTTTGATGATTTGATGGGAACAAGAACCGCTCGGGTCAGTGAACGTAGGAATATTTCAAGCGGGTCTAAGCAGAAACGTCTAGGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTACTAAAATGAACAACTGAATCGCATTGCTGAATGGCCTGTCCTACAACGTCAAAAAGCAAGCCAAACACGTCAAGAGGTTGTTCGACAGTTGGAGGCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCCTTCCTTAAAGTTCTCGACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAACCGATGA

mRNA sequence

ATGATTATTTTGAATGTATTGGTTACGCAAACTAAAGAGGAAGAGGCAGGCCTCGTGGAGTGCCTCGTGGAGTTGGTCAATGGTGGTGGGTGGAGGTCCGACAACGGGACCTTTCACCCCGGGTACTTAAATCAGCTGGCGAGAGTGATGGCCTTCAAGATCCTAGGTTGTAATATCCATGCTTCAACCATCGATGGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCGGAGATGCGTGGCCCAATGTGTAGTGAGAAAGAAGTCTTTGACGATTGGGTCAAGAGTCATCCGGCAGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCATTATGACGAACTGTCTTACGTGTTTGGTAAAGATCGTGCAACAGAAGGTCGGGCCGAGAGTTTTGCGAACAATGGATCGAACGATCTTGCTGGGTATGATGCATTTATCGCTGACGCTGCGCCGGATATGGATTTCCCGCCAATGTACAGTCAGGGATTGAACATGTCGTTTGATGATTTGATGGGAACAAGAACCGCTCGGGTCAGTGAACGTAGGAATATTTCAAGCGGGTCTAAGCAGAAACGTCTAGGACATGCCACAGATAGTGGGGACATATTGGAGGCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCCTTCCTTAAAGTTCTCGACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAACCGATGA

Coding sequence (CDS)

ATGATTATTTTGAATGTATTGGTTACGCAAACTAAAGAGGAAGAGGCAGGCCTCGTGGAGTGCCTCGTGGAGTTGGTCAATGGTGGTGGGTGGAGGTCCGACAACGGGACCTTTCACCCCGGGTACTTAAATCAGCTGGCGAGAGTGATGGCCTTCAAGATCCTAGGTTGTAATATCCATGCTTCAACCATCGATGGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCGGAGATGCGTGGCCCAATGTGTAGTGAGAAAGAAGTCTTTGACGATTGGGTCAAGAGTCATCCGGCAGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCATTATGACGAACTGTCTTACGTGTTTGGTAAAGATCGTGCAACAGAAGGTCGGGCCGAGAGTTTTGCGAACAATGGATCGAACGATCTTGCTGGGTATGATGCATTTATCGCTGACGCTGCGCCGGATATGGATTTCCCGCCAATGTACAGTCAGGGATTGAACATGTCGTTTGATGATTTGATGGGAACAAGAACCGCTCGGGTCAGTGAACGTAGGAATATTTCAAGCGGGTCTAAGCAGAAACGTCTAGGACATGCCACAGATAGTGGGGACATATTGGAGGCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCCTTCCTTAAAGTTCTCGACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAACCGATGA

Protein sequence

MIILNVLVTQTKEEEAGLVECLVELVNGGGWRSDNGTFHPGYLNQLARVMAFKILGCNIHASTIDGRIKLMKRMFHALAEMRGPMCSEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATEGRAESFANNGSNDLAGYDAFIADAAPDMDFPPMYSQGLNMSFDDLMGTRTARVSERRNISSGSKQKRLGHATDSGDILEAIPELTLMDRCRLMRILMRNVDDMKAFLKVLDNMKYPYCSIILQENR

Homology

[Close]

BLAST of MELO3C033364 vs. NCBI nr
Match: KAA0035621.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0041647.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0046728.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0052099.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0054495.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 402.1 bits (1032), Expect = 3.5e-108
Identity = 215/294 (73.13%), Postives = 223/294 (75.85%), Query Frame = 0


Query: 9   TQTKEEEAGLVECLVELVNGGGWRSDNGTFHPGYLNQLARVMAFKILGCNIHASTIDGRI 68
           T TKEEEAGLVECLVELVN GGWRSDNGTF PGYLNQLAR+MAFKI G NIHASTID RI
Sbjct: 11  TWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRI 70

Query: 69  KLMKRMFHALAEMRGPMCS-------------EKEVFDDWVKSHPAAKGLLNKSFVHYDE 128
           KLMKRMFHALAEMRGP CS             EKEVFDDW  SHPAAKGLLNKSFVHYDE
Sbjct: 71  KLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDE 130

Query: 129 LSYVFGKDRATEGRAESFANNGSNDLAGYDAFIADAAPDMDFPPMYSQGLNMSFDDLMGT 188
           LSYVFGKDRAT GRAESFA+ GSND  GYDA  ADA PD DFPPMYS GLNMS DDLM T
Sbjct: 131 LSYVFGKDRATGGRAESFADIGSNDPPGYDAVAADAMPDTDFPPMYSPGLNMSPDDLMET 190

Query: 189 RTARVSERRNISSGSKQKRLGHATDSGDI------------------------------- 248
           RTARVSERRN+SSGSK+KR GHATDSGDI                               
Sbjct: 191 RTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQ 250

Query: 249 -----LEAIPELTLMDRCRLMRILMRNVDDMKAFLKVLDNMKYPYCSIILQENR 254
                LEAIPELTLMDRCRLMRILMRNVDDMKAFL+V D+MKYPYCS+ILQEN+
Sbjct: 251 EIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQENQ 302

[Close]

BLAST of MELO3C033364 vs. NCBI nr
Match: KAA0044843.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 401.7 bits (1031), Expect = 4.5e-108
Identity = 215/294 (73.13%), Postives = 221/294 (75.17%), Query Frame = 0


Query: 9   TQTKEEEAGLVECLVELVNGGGWRSDNGTFHPGYLNQLARVMAFKILGCNIHASTIDGRI 68
           T TKEEEAGLVECLVELVN GGWRSDNGTF PGYLNQLAR+MAFKI GCN HASTID RI
Sbjct: 11  TWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNNHASTIDSRI 70

Query: 69  KLMKRMFHALAEMRGPMCS-------------EKEVFDDWVKSHPAAKGLLNKSFVHYDE 128
           KLMKRMFHALAEM GP CS             EKEVFDDW  SHPAAKGLLNKSFVHYDE
Sbjct: 71  KLMKRMFHALAEMCGPNCSGFGWNDEKKCIIAEKEVFDDW--SHPAAKGLLNKSFVHYDE 130

Query: 129 LSYVFGKDRATEGRAESFANNGSNDLAGYDAFIADAAPDMDFPPMYSQGLNMSFDDLMGT 188
           LSYVFGKDRAT  RAESFA+ GSND AGYDAF AD  PD DFPPMYS GLNMS DDLM T
Sbjct: 131 LSYVFGKDRATGDRAESFADIGSNDPAGYDAFAADIVPDTDFPPMYSPGLNMSPDDLMET 190

Query: 189 RTARVSERRNISSGSKQKRLGHATDSGDI------------------------------- 248
           RTARVSERRN+SSGSK+KR GHA DSGDI                               
Sbjct: 191 RTARVSERRNVSSGSKRKRPGHAIDSGDIVRTAIEYGNEQLHRIAEWSILQCQDATQTRQ 250

Query: 249 -----LEAIPELTLMDRCRLMRILMRNVDDMKAFLKVLDNMKYPYCSIILQENR 254
                LEAIPELTLMDRCRLMRI+MRNVDDMKAFL+V DNMKYPYCSIILQENR
Sbjct: 251 EIVRQLEAIPELTLMDRCRLMRIIMRNVDDMKAFLEVPDNMKYPYCSIILQENR 302

[Close]

BLAST of MELO3C033364 vs. NCBI nr
Match: KAA0038122.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0047362.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0055248.1 retrotransposon protein [Cucumis melo var. makuwa] >TYJ97185.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK00369.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 401.4 bits (1030), Expect = 5.9e-108
Identity = 215/294 (73.13%), Postives = 223/294 (75.85%), Query Frame = 0


Query: 9   TQTKEEEAGLVECLVELVNGGGWRSDNGTFHPGYLNQLARVMAFKILGCNIHASTIDGRI 68
           T TKEEEAGLVECLVELVN GGWRSDNGTF PGYLNQLAR+MAFKI G NIHASTID RI
Sbjct: 11  TWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRI 70

Query: 69  KLMKRMFHALAEMRGPMCS-------------EKEVFDDWVKSHPAAKGLLNKSFVHYDE 128
           KLMKRMFHALAEMRGP CS             EKEVFDDW  SHPAAKGLLNKSFVHYDE
Sbjct: 71  KLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDE 130

Query: 129 LSYVFGKDRATEGRAESFANNGSNDLAGYDAFIADAAPDMDFPPMYSQGLNMSFDDLMGT 188
           LSYVFGKDRAT GRAESFA+ GSND  GYDA  ADA PD DFPPMYS GLNMS DDLM T
Sbjct: 131 LSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMET 190

Query: 189 RTARVSERRNISSGSKQKRLGHATDSGDI------------------------------- 248
           RTARVSERRN+SSGSK+KR GHATDSGDI                               
Sbjct: 191 RTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQ 250

Query: 249 -----LEAIPELTLMDRCRLMRILMRNVDDMKAFLKVLDNMKYPYCSIILQENR 254
                LEAIPELTLMDRCRLMRILMRNVDDMKAFL+V D+MKYPYCS+ILQEN+
Sbjct: 251 EIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQENQ 302

[Close]

BLAST of MELO3C033364 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 401.4 bits (1030), Expect = 5.9e-108
Identity = 215/294 (73.13%), Postives = 223/294 (75.85%), Query Frame = 0


Query: 9   TQTKEEEAGLVECLVELVNGGGWRSDNGTFHPGYLNQLARVMAFKILGCNIHASTIDGRI 68
           T TKEEEAGLVECLVELVN GGWRSDNGTF PGYLNQLAR+MAFKI G NIHASTID RI
Sbjct: 366 TWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRI 425

Query: 69  KLMKRMFHALAEMRGPMCS-------------EKEVFDDWVKSHPAAKGLLNKSFVHYDE 128
           KLMKRMFHALAEMRGP CS             EKEVFDDW  SHPAAKGLLNKSFVHYDE
Sbjct: 426 KLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDE 485

Query: 129 LSYVFGKDRATEGRAESFANNGSNDLAGYDAFIADAAPDMDFPPMYSQGLNMSFDDLMGT 188
           LSYVFGKDRAT GRAESFA+ GSND  GYDA  ADA PD DFPPMYS GLNMS DDLM T
Sbjct: 486 LSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMET 545

Query: 189 RTARVSERRNISSGSKQKRLGHATDSGDI------------------------------- 248
           RTARVSERRN+SSGSK+KR GHATDSGDI                               
Sbjct: 546 RTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQ 605

Query: 249 -----LEAIPELTLMDRCRLMRILMRNVDDMKAFLKVLDNMKYPYCSIILQENR 254
                LEAIPELTLMDRCRLMRILMRNVDDMKAFL+V D+MKYPYCS+ILQEN+
Sbjct: 606 EIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQENQ 657

[Close]

BLAST of MELO3C033364 vs. NCBI nr
Match: KAA0057083.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK09001.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 401.4 bits (1030), Expect = 5.9e-108
Identity = 215/294 (73.13%), Postives = 223/294 (75.85%), Query Frame = 0


Query: 9   TQTKEEEAGLVECLVELVNGGGWRSDNGTFHPGYLNQLARVMAFKILGCNIHASTIDGRI 68
           T TKEEEAGLVECLVELVN GGWRSDNGTF PGYLNQLAR+MAFKI G NIHASTID RI
Sbjct: 11  TWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRI 70

Query: 69  KLMKRMFHALAEMRGPMCS-------------EKEVFDDWVKSHPAAKGLLNKSFVHYDE 128
           KLMKRMFHALAEMRGP CS             EKEVFDDW  SHPAAKGLLNKSFVHYDE
Sbjct: 71  KLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDE 130

Query: 129 LSYVFGKDRATEGRAESFANNGSNDLAGYDAFIADAAPDMDFPPMYSQGLNMSFDDLMGT 188
           LSYVFGKDRAT GRAESFA+ GSND  GYDA  ADA PD DFPPMYS GLNMS DDLM T
Sbjct: 131 LSYVFGKDRATGGRAESFADIGSNDPPGYDAEAADAMPDTDFPPMYSPGLNMSPDDLMET 190

Query: 189 RTARVSERRNISSGSKQKRLGHATDSGDI------------------------------- 248
           RTARVSERRN+SSGSK+KR GHATDSGDI                               
Sbjct: 191 RTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQ 250

Query: 249 -----LEAIPELTLMDRCRLMRILMRNVDDMKAFLKVLDNMKYPYCSIILQENR 254
                LEAIPELTLMDRCRLMRILMRNVDDMKAFL+V D+MKYPYCS+ILQEN+
Sbjct: 251 EIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQENQ 302

[Close]

BLAST of MELO3C033364 vs. ExPASy TrEMBL
Match: A0A5D3DPR5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00580 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.7e-108
Identity = 215/294 (73.13%), Postives = 223/294 (75.85%), Query Frame = 0


Query: 9   TQTKEEEAGLVECLVELVNGGGWRSDNGTFHPGYLNQLARVMAFKILGCNIHASTIDGRI 68
           T TKEEEAGLVECLVELVN GGWRSDNGTF PGYLNQLAR+MAFKI G NIHASTID RI
Sbjct: 11  TWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRI 70

Query: 69  KLMKRMFHALAEMRGPMCS-------------EKEVFDDWVKSHPAAKGLLNKSFVHYDE 128
           KLMKRMFHALAEMRGP CS             EKEVFDDW  SHPAAKGLLNKSFVHYDE
Sbjct: 71  KLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDE 130

Query: 129 LSYVFGKDRATEGRAESFANNGSNDLAGYDAFIADAAPDMDFPPMYSQGLNMSFDDLMGT 188
           LSYVFGKDRAT GRAESFA+ GSND  GYDA  ADA PD DFPPMYS GLNMS DDLM T
Sbjct: 131 LSYVFGKDRATGGRAESFADIGSNDPPGYDAVAADAMPDTDFPPMYSPGLNMSPDDLMET 190

Query: 189 RTARVSERRNISSGSKQKRLGHATDSGDI------------------------------- 248
           RTARVSERRN+SSGSK+KR GHATDSGDI                               
Sbjct: 191 RTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQ 250

Query: 249 -----LEAIPELTLMDRCRLMRILMRNVDDMKAFLKVLDNMKYPYCSIILQENR 254
                LEAIPELTLMDRCRLMRILMRNVDDMKAFL+V D+MKYPYCS+ILQEN+
Sbjct: 251 EIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQENQ 302

[Close]

BLAST of MELO3C033364 vs. ExPASy TrEMBL
Match: A0A5A7TMW5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001350 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.2e-108
Identity = 215/294 (73.13%), Postives = 221/294 (75.17%), Query Frame = 0


Query: 9   TQTKEEEAGLVECLVELVNGGGWRSDNGTFHPGYLNQLARVMAFKILGCNIHASTIDGRI 68
           T TKEEEAGLVECLVELVN GGWRSDNGTF PGYLNQLAR+MAFKI GCN HASTID RI
Sbjct: 11  TWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNNHASTIDSRI 70

Query: 69  KLMKRMFHALAEMRGPMCS-------------EKEVFDDWVKSHPAAKGLLNKSFVHYDE 128
           KLMKRMFHALAEM GP CS             EKEVFDDW  SHPAAKGLLNKSFVHYDE
Sbjct: 71  KLMKRMFHALAEMCGPNCSGFGWNDEKKCIIAEKEVFDDW--SHPAAKGLLNKSFVHYDE 130

Query: 129 LSYVFGKDRATEGRAESFANNGSNDLAGYDAFIADAAPDMDFPPMYSQGLNMSFDDLMGT 188
           LSYVFGKDRAT  RAESFA+ GSND AGYDAF AD  PD DFPPMYS GLNMS DDLM T
Sbjct: 131 LSYVFGKDRATGDRAESFADIGSNDPAGYDAFAADIVPDTDFPPMYSPGLNMSPDDLMET 190

Query: 189 RTARVSERRNISSGSKQKRLGHATDSGDI------------------------------- 248
           RTARVSERRN+SSGSK+KR GHA DSGDI                               
Sbjct: 191 RTARVSERRNVSSGSKRKRPGHAIDSGDIVRTAIEYGNEQLHRIAEWSILQCQDATQTRQ 250

Query: 249 -----LEAIPELTLMDRCRLMRILMRNVDDMKAFLKVLDNMKYPYCSIILQENR 254
                LEAIPELTLMDRCRLMRI+MRNVDDMKAFL+V DNMKYPYCSIILQENR
Sbjct: 251 EIVRQLEAIPELTLMDRCRLMRIIMRNVDDMKAFLEVPDNMKYPYCSIILQENR 302

[Close]

BLAST of MELO3C033364 vs. ExPASy TrEMBL
Match: A0A5A7UME4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold615G00290 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.9e-108
Identity = 215/294 (73.13%), Postives = 223/294 (75.85%), Query Frame = 0


Query: 9   TQTKEEEAGLVECLVELVNGGGWRSDNGTFHPGYLNQLARVMAFKILGCNIHASTIDGRI 68
           T TKEEEAGLVECLVELVN GGWRSDNGTF PGYLNQLAR+MAFKI G NIHASTID RI
Sbjct: 11  TWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRI 70

Query: 69  KLMKRMFHALAEMRGPMCS-------------EKEVFDDWVKSHPAAKGLLNKSFVHYDE 128
           KLMKRMFHALAEMRGP CS             EKEVFDDW  SHPAAKGLLNKSFVHYDE
Sbjct: 71  KLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDE 130

Query: 129 LSYVFGKDRATEGRAESFANNGSNDLAGYDAFIADAAPDMDFPPMYSQGLNMSFDDLMGT 188
           LSYVFGKDRAT GRAESFA+ GSND  GYDA  ADA PD DFPPMYS GLNMS DDLM T
Sbjct: 131 LSYVFGKDRATGGRAESFADIGSNDPPGYDAEAADAMPDTDFPPMYSPGLNMSPDDLMET 190

Query: 189 RTARVSERRNISSGSKQKRLGHATDSGDI------------------------------- 248
           RTARVSERRN+SSGSK+KR GHATDSGDI                               
Sbjct: 191 RTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQ 250

Query: 249 -----LEAIPELTLMDRCRLMRILMRNVDDMKAFLKVLDNMKYPYCSIILQENR 254
                LEAIPELTLMDRCRLMRILMRNVDDMKAFL+V D+MKYPYCS+ILQEN+
Sbjct: 251 EIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQENQ 302

[Close]

BLAST of MELO3C033364 vs. ExPASy TrEMBL
Match: A0A5D3CBF7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00350 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.9e-108
Identity = 215/294 (73.13%), Postives = 223/294 (75.85%), Query Frame = 0


Query: 9   TQTKEEEAGLVECLVELVNGGGWRSDNGTFHPGYLNQLARVMAFKILGCNIHASTIDGRI 68
           T TKEEEAGLVECLVELVN GGWRSDNGTF PGYLNQLAR+MAFKI G NIHASTID RI
Sbjct: 11  TWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRI 70

Query: 69  KLMKRMFHALAEMRGPMCS-------------EKEVFDDWVKSHPAAKGLLNKSFVHYDE 128
           KLMKRMFHALAEMRGP CS             EKEVFDDW  SHPAAKGLLNKSFVHYDE
Sbjct: 71  KLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDE 130

Query: 129 LSYVFGKDRATEGRAESFANNGSNDLAGYDAFIADAAPDMDFPPMYSQGLNMSFDDLMGT 188
           LSYVFGKDRAT GRAESFA+ GSND  GYDA  ADA PD DFPPMYS GLNMS DDLM T
Sbjct: 131 LSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMET 190

Query: 189 RTARVSERRNISSGSKQKRLGHATDSGDI------------------------------- 248
           RTARVSERRN+SSGSK+KR GHATDSGDI                               
Sbjct: 191 RTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQ 250

Query: 249 -----LEAIPELTLMDRCRLMRILMRNVDDMKAFLKVLDNMKYPYCSIILQENR 254
                LEAIPELTLMDRCRLMRILMRNVDDMKAFL+V D+MKYPYCS+ILQEN+
Sbjct: 251 EIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQENQ 302

[Close]

BLAST of MELO3C033364 vs. ExPASy TrEMBL
Match: E5GCB5 (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.9e-108
Identity = 215/294 (73.13%), Postives = 223/294 (75.85%), Query Frame = 0


Query: 9   TQTKEEEAGLVECLVELVNGGGWRSDNGTFHPGYLNQLARVMAFKILGCNIHASTIDGRI 68
           T TKEEEAGLVECLVELVN GGWRSDNGTF PGYLNQLAR+MAFKI G NIHASTID RI
Sbjct: 366 TWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRI 425

Query: 69  KLMKRMFHALAEMRGPMCS-------------EKEVFDDWVKSHPAAKGLLNKSFVHYDE 128
           KLMKRMFHALAEMRGP CS             EKEVFDDW  SHPAAKGLLNKSFVHYDE
Sbjct: 426 KLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDE 485

Query: 129 LSYVFGKDRATEGRAESFANNGSNDLAGYDAFIADAAPDMDFPPMYSQGLNMSFDDLMGT 188
           LSYVFGKDRAT GRAESFA+ GSND  GYDA  ADA PD DFPPMYS GLNMS DDLM T
Sbjct: 486 LSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMET 545

Query: 189 RTARVSERRNISSGSKQKRLGHATDSGDI------------------------------- 248
           RTARVSERRN+SSGSK+KR GHATDSGDI                               
Sbjct: 546 RTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQ 605

Query: 249 -----LEAIPELTLMDRCRLMRILMRNVDDMKAFLKVLDNMKYPYCSIILQENR 254
                LEAIPELTLMDRCRLMRILMRNVDDMKAFL+V D+MKYPYCS+ILQEN+
Sbjct: 606 EIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQENQ 657

The following BLAST results are available for this feature:

BLAST of MELO3C033364 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035621.1	3.5e-108	73.13	retrotransposon protein [Cucumis melo var. makuwa] >KAA0041647.1 retrotransposon...	[more]
KAA0044843.1	4.5e-108	73.13	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0038122.1	5.9e-108	73.13	retrotransposon protein [Cucumis melo var. makuwa] >KAA0047362.1 retrotransposon...	[more]
ADN34114.1	5.9e-108	73.13	retrotransposon protein [Cucumis melo subsp. melo]	[more]
KAA0057083.1	5.9e-108	73.13	retrotransposon protein [Cucumis melo var. makuwa] >TYK09001.1 retrotransposon p...	[more]

BLAST of MELO3C033364 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C033364 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DPR5	1.7e-108	73.13	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TMW5	2.2e-108	73.13	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UME4	2.9e-108	73.13	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CBF7	2.9e-108	73.13	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
E5GCB5	2.9e-108	73.13	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]

BLAST of MELO3C033364 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 10..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033364.1	MELO3C033364.1	mRNA