MELO3C033358 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033358
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Retrotransposon protein
Location	chr08: 20828761 .. 20829645 (-)
RNA-Seq Expression	MELO3C033358
Synteny	MELO3C033358

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAACAAACACTTATTGGAGTCCTAACTGCATTCACGTTGGCCCAACGTCAGATTTTACTGACGTTGGAGCTATTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGGAGCTTGCTTACTTTCACATGATACACGAGTCAGATCTTGTGTGTCGGCAGAGCACGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTGGCTGGTCTTTCGTCGACTGAGATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGTACGTCCTTGCTCATGACGTGAAGAACCGCGTCATCCAACGGGAATTTGTACGGTCCGGTGAGACAGTATCTCGACATTTTACATCGTATTGTTCGTTGTTCTTCGACCGTACGAGGAGTTGATAAAAAGACCTGTTCCGGTAACAAGTAACTGCAATGATCAACGTTGGAAGTGTTTTGAGGTGGGCATCATAGAAGTTCACTATATTTGACCTTTACGTACGTCGCACTTATTTCAACGTGTTTATTTCAACCTGCAGAATTGGCTTGGTGTGTTAGACGGGACGTACATAATGGTCAACGTTCGCGCAGGAGATCGGCCTACATTCAGAACGCGTAAGGGGGAAATTGCCACAAACGTTCTGGGGGTGTGTGACACGAAAGGGGATTTCGTTTATGTCCTCGCCGGTTGGGAAGGATCCACAGTAGACTCGCGGATCCTACGTGATGCCCTTTCATGAGAAAATGGACTACAAGTGCCAAAGGGTATATCTTCTTTATAATAAAACACCGCCGCTTCCTACTTACCTATTTAAAGGTCATAAAGGAACCATTTAATAACAGGATATTATTATCTGTGCG

mRNA sequence

ATGGATGAACAAACACTTATTGGAGTCCTAACTGCATTCACGTTGGCCCAACGTCAGATTTTACTGACGTTGGAGCTATTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGGAGCTTGCTTACTTTCACATGATACACGAGTCAGATCTTGTGTGTCGGCAGAGCACGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTGGCTGGTCTTTCGTCGACTGAGATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGTACGTCCTTGCTCATGACGTGAAGAACCGCGTCATCCAACGGGAATTTGTACGGTCCGGTGAGACAAATTGGCTTGGTGTGTTAGACGGGACGTACATAATGGTCAACGTTCGCGCAGGAGATCGGCCTACATTCAGAACGCGTAAGGGGGAAATTGCCACAAACGTTCTGGGGGTGTGTGACACGAAAGGGGATTTCGTTTATGTCCTCGCCGGTTGGGAAGGATCCACAGTAGACTCGCGGATCCTACGTGATGCCCTTTCATGAGAAAATGGACTACAAGTGCCAAAGGGTATATCTTCTTTATAATAAAACACCGCCGCTTCCTACTTACCTATTTAAAGGTCATAAAGGAACCATTTAATAACAGGATATTATTATCTGTGCG

Coding sequence (CDS)

ATGGATGAACAAACACTTATTGGAGTCCTAACTGCATTCACGTTGGCCCAACGTCAGATTTTACTGACGTTGGAGCTATTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGGAGCTTGCTTACTTTCACATGATACACGAGTCAGATCTTGTGTGTCGGCAGAGCACGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTGGCTGGTCTTTCGTCGACTGAGATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGTACGTCCTTGCTCATGACGTGAAGAACCGCGTCATCCAACGGGAATTTGTACGGTCCGGTGAGACAAATTGGCTTGGTGTGTTAGACGGGACGTACATAATGGTCAACGTTCGCGCAGGAGATCGGCCTACATTCAGAACGCGTAAGGGGGAAATTGCCACAAACGTTCTGGGGGTGTGTGACACGAAAGGGGATTTCGTTTATGTCCTCGCCGGTTGGGAAGGATCCACAGTAGACTCGCGGATCCTACGTGATGCCCTTTCATGA

Protein sequence

MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFHMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLYVLAHDVKNRVIQREFVRSGETNWLGVLDGTYIMVNVRAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSTVDSRILRDALS

Homology

[Close]

BLAST of MELO3C033358 vs. NCBI nr
Match: KAA0058874.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 334.3 bits (856), Expect = 6.6e-88
Identity = 177/228 (77.63%), Postives = 180/228 (78.95%), Query Frame = 0


Query: 1   MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFHMIHESDLV 60
           MDEQTLIGVLTAFT AQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYF MIHESDLV
Sbjct: 1   MDEQTLIGVLTAFTSAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV 60

Query: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLYVLAHDVKNRVIQREFVRS 120
           CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFL+VLAHDVKNRVIQREFVRS
Sbjct: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS 120

Query: 121 GET---------------------------------------NWLGVLDGTYIMVNVRAG 180
           GET                                       N LG LDGTYI VNV AG
Sbjct: 121 GETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAG 180

Query: 181 DRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSTVDSRILRDALS 190
           DRPTFRTRKGEI TNVLGVCDTKGDFVYVLAGWEGS  DSRILR+A+S
Sbjct: 181 DRPTFRTRKGEIVTNVLGVCDTKGDFVYVLAGWEGSAADSRILRNAIS 228

[Close]

BLAST of MELO3C033358 vs. NCBI nr
Match: KAA0048777.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK31557.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 331.3 bits (848), Expect = 5.6e-87
Identity = 174/208 (83.65%), Postives = 179/208 (86.06%), Query Frame = 0


Query: 1   MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFHMIHESDLV 60
           MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTP DTRHRIRELAYF MIHESDLV
Sbjct: 1   MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPSDTRHRIRELAYFRMIHESDLV 60

Query: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLYVLAHDVKNRVIQREFVRS 120
           CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFL+VLAHDVKNR+IQREF+RS
Sbjct: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRIIQREFIRS 120

Query: 121 ---GET----------------NWLGVLDGTYIMVNVRAGDRPTFRTRKGEIATNVLGVC 180
               ET                N LG LDGTYI VNV AGD+PTFRTRKGEIATNVLGVC
Sbjct: 121 RVDKETCSVTNNCNDQRWKCFENCLGALDGTYIKVNVPAGDQPTFRTRKGEIATNVLGVC 180

Query: 181 DTKGDFVYVLAGWEGSTVDSRILRDALS 190
           DTK DFVYVLAGW+GS  DSRILRDALS
Sbjct: 181 DTKWDFVYVLAGWKGSAADSRILRDALS 208

[Close]

BLAST of MELO3C033358 vs. NCBI nr
Match: KAA0041241.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 308.9 bits (790), Expect = 3.0e-80
Identity = 152/158 (96.20%), Postives = 152/158 (96.20%), Query Frame = 0


Query: 28  MNNNKRLPHTPPDTRHRIRELAYFHMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 87
           MNNNKRLPHTPPDTRHRIRELAYFHMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFHMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 88  TEIVDVEEMVAMFLYVLAHDVKNRVIQREFVRSGETNWLGVLDGTYIMVNVRAGDRPTFR 147
           TEIVDVEEMVAMFLYVLAHDVKNRVIQREF      NWLGVLDGTYIMVNVRAGDRPTFR
Sbjct: 61  TEIVDVEEMVAMFLYVLAHDVKNRVIQREF------NWLGVLDGTYIMVNVRAGDRPTFR 120

Query: 148 TRKGEIATNVLGVCDTKGDFVYVLAGWEGSTVDSRILR 186
           TRKGEIATNVLGVCDTKGDFVYVLAGWEGSTVDSRILR
Sbjct: 121 TRKGEIATNVLGVCDTKGDFVYVLAGWEGSTVDSRILR 152

[Close]

BLAST of MELO3C033358 vs. NCBI nr
Match: KAA0056587.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK24269.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 305.4 bits (781), Expect = 3.3e-79
Identity = 155/189 (82.01%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFHMIHESDLV 60
           MD++TL+GVLTAFT+AQRQ+LLTLE LMN+NK LP TP DTRHRIR+LAYF MIHE D+V
Sbjct: 1   MDQETLLGVLTAFTMAQRQMLLTLEALMNDNKHLPQTPYDTRHRIRQLAYFRMIHEYDIV 60

Query: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLYVLAHDVKNRVIQREFVRS 120
           CR+STRMD+RTFAILCHLLR V+GLSSTEIVDVEE+VAMFL+VLAHDVKNRVIQREFVRS
Sbjct: 61  CRESTRMDKRTFAILCHLLRTVSGLSSTEIVDVEEIVAMFLHVLAHDVKNRVIQREFVRS 120

Query: 121 GETNWLGVLDGTYIMVNVRAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSTVD 180
            E  W   +  TYI VNV AGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGS  D
Sbjct: 121 -ELPWR--VRRTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAAD 180

Query: 181 SRILRDALS 190
           SRILRD+LS
Sbjct: 181 SRILRDSLS 186

[Close]

BLAST of MELO3C033358 vs. NCBI nr
Match: KAA0047012.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 303.1 bits (775), Expect = 1.6e-78
Identity = 152/169 (89.94%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 28  MNNNKRLPHTPPDTRHRIRELAYFHMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 87
           MNNNKRLPHTPPDTRHRIRELAYF MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFCMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 88  TEIVDVEEMVAMFLYVLAHDVKNRVIQREFVRSGET-------NWLGVLDGTYIMVNVRA 147
           TEIVDVEEMVAMFL+VLAHDVKNRVIQREFVRSGET       N LG LDGTYI VNV A
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNINCLGALDGTYIKVNVPA 120

Query: 148 GDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSTVDSRILRDALS 190
           GDRPTFRTRKGE+ATNVLGVCDTKGDFVYVLAGWEGST DS ILRDA+S
Sbjct: 121 GDRPTFRTRKGELATNVLGVCDTKGDFVYVLAGWEGSTADSWILRDAIS 169

[Close]

BLAST of MELO3C033358 vs. ExPASy TrEMBL
Match: A0A5A7UUT3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G00380 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.2e-88
Identity = 177/228 (77.63%), Postives = 180/228 (78.95%), Query Frame = 0


Query: 1   MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFHMIHESDLV 60
           MDEQTLIGVLTAFT AQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYF MIHESDLV
Sbjct: 1   MDEQTLIGVLTAFTSAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV 60

Query: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLYVLAHDVKNRVIQREFVRS 120
           CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFL+VLAHDVKNRVIQREFVRS
Sbjct: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS 120

Query: 121 GET---------------------------------------NWLGVLDGTYIMVNVRAG 180
           GET                                       N LG LDGTYI VNV AG
Sbjct: 121 GETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAG 180

Query: 181 DRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSTVDSRILRDALS 190
           DRPTFRTRKGEI TNVLGVCDTKGDFVYVLAGWEGS  DSRILR+A+S
Sbjct: 181 DRPTFRTRKGEIVTNVLGVCDTKGDFVYVLAGWEGSAADSRILRNAIS 228

[Close]

BLAST of MELO3C033358 vs. ExPASy TrEMBL
Match: A0A5A7U3B3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G00460 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.7e-87
Identity = 174/208 (83.65%), Postives = 179/208 (86.06%), Query Frame = 0


Query: 1   MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFHMIHESDLV 60
           MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTP DTRHRIRELAYF MIHESDLV
Sbjct: 1   MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPSDTRHRIRELAYFRMIHESDLV 60

Query: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLYVLAHDVKNRVIQREFVRS 120
           CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFL+VLAHDVKNR+IQREF+RS
Sbjct: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRIIQREFIRS 120

Query: 121 ---GET----------------NWLGVLDGTYIMVNVRAGDRPTFRTRKGEIATNVLGVC 180
               ET                N LG LDGTYI VNV AGD+PTFRTRKGEIATNVLGVC
Sbjct: 121 RVDKETCSVTNNCNDQRWKCFENCLGALDGTYIKVNVPAGDQPTFRTRKGEIATNVLGVC 180

Query: 181 DTKGDFVYVLAGWEGSTVDSRILRDALS 190
           DTK DFVYVLAGW+GS  DSRILRDALS
Sbjct: 181 DTKWDFVYVLAGWKGSAADSRILRDALS 208

[Close]

BLAST of MELO3C033358 vs. ExPASy TrEMBL
Match: A0A5A7THV6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002150 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.4e-80
Identity = 152/158 (96.20%), Postives = 152/158 (96.20%), Query Frame = 0


Query: 28  MNNNKRLPHTPPDTRHRIRELAYFHMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 87
           MNNNKRLPHTPPDTRHRIRELAYFHMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFHMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 88  TEIVDVEEMVAMFLYVLAHDVKNRVIQREFVRSGETNWLGVLDGTYIMVNVRAGDRPTFR 147
           TEIVDVEEMVAMFLYVLAHDVKNRVIQREF      NWLGVLDGTYIMVNVRAGDRPTFR
Sbjct: 61  TEIVDVEEMVAMFLYVLAHDVKNRVIQREF------NWLGVLDGTYIMVNVRAGDRPTFR 120

Query: 148 TRKGEIATNVLGVCDTKGDFVYVLAGWEGSTVDSRILR 186
           TRKGEIATNVLGVCDTKGDFVYVLAGWEGSTVDSRILR
Sbjct: 121 TRKGEIATNVLGVCDTKGDFVYVLAGWEGSTVDSRILR 152

[Close]

BLAST of MELO3C033358 vs. ExPASy TrEMBL
Match: A0A5D3DLW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00320 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.6e-79
Identity = 155/189 (82.01%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFHMIHESDLV 60
           MD++TL+GVLTAFT+AQRQ+LLTLE LMN+NK LP TP DTRHRIR+LAYF MIHE D+V
Sbjct: 1   MDQETLLGVLTAFTMAQRQMLLTLEALMNDNKHLPQTPYDTRHRIRQLAYFRMIHEYDIV 60

Query: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLYVLAHDVKNRVIQREFVRS 120
           CR+STRMD+RTFAILCHLLR V+GLSSTEIVDVEE+VAMFL+VLAHDVKNRVIQREFVRS
Sbjct: 61  CRESTRMDKRTFAILCHLLRTVSGLSSTEIVDVEEIVAMFLHVLAHDVKNRVIQREFVRS 120

Query: 121 GETNWLGVLDGTYIMVNVRAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSTVD 180
            E  W   +  TYI VNV AGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGS  D
Sbjct: 121 -ELPWR--VRRTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAAD 180

Query: 181 SRILRDALS 190
           SRILRD+LS
Sbjct: 181 SRILRDSLS 186

[Close]

BLAST of MELO3C033358 vs. ExPASy TrEMBL
Match: A0A5A7TU76 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G002110 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.9e-79
Identity = 152/169 (89.94%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 28  MNNNKRLPHTPPDTRHRIRELAYFHMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 87
           MNNNKRLPHTPPDTRHRIRELAYF MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFCMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 88  TEIVDVEEMVAMFLYVLAHDVKNRVIQREFVRSGET-------NWLGVLDGTYIMVNVRA 147
           TEIVDVEEMVAMFL+VLAHDVKNRVIQREFVRSGET       N LG LDGTYI VNV A
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNINCLGALDGTYIKVNVPA 120

Query: 148 GDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSTVDSRILRDALS 190
           GDRPTFRTRKGE+ATNVLGVCDTKGDFVYVLAGWEGST DS ILRDA+S
Sbjct: 121 GDRPTFRTRKGELATNVLGVCDTKGDFVYVLAGWEGSTADSWILRDAIS 169

[Close]

BLAST of MELO3C033358 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 79.3 bits (194), Expect = 3.6e-15
Identity = 49/166 (29.52%), Postives = 74/166 (44.58%), Query Frame = 0


Query: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLYVLAHDVKNRVIQREFVRS 120
           C ++ RMD+  F  LC LL+    L  T  + +E  +A+FL+++ H+++ R +Q  F  S
Sbjct: 42  CFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYS 101

Query: 121 GET-------------------------------------NWLGVLDGTYIMVNVRAGDR 180
           GET                                     + +GV+D  +I V V   ++
Sbjct: 102 GETISRHFNNVLNAVIAISKDFFQPNSNSDTLENDDPYFKDCVGVVDSFHIPVMVGVDEQ 161

Query: 181 PTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSTVDSRILRDALS 190
             FR   G +  NVL        F YVLAGWEGS  D ++L  AL+
Sbjct: 162 GPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALT 207

[Close]

BLAST of MELO3C033358 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 71.6 bits (174), Expect = 7.5e-13
Identity = 30/64 (46.88%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 126 LGVLDGTYIMVNVRAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSTVDSRILR 185
           +G +D T+I   V     P+FR RKG+I+ N+L  C+   +F+YVL+GWEGS  DS++L 
Sbjct: 26  VGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSAHDSKVLN 85

Query: 186 DALS 190
           DAL+
Sbjct: 86  DALT 89

[Close]

BLAST of MELO3C033358 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-09
Identity = 42/180 (23.33%), Postives = 69/180 (38.33%), Query Frame = 0


Query: 54  IHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLYVLAHDVKNRVI 113
           + +    C Q  RM    F  LC++L+    L  T  + +EE VAMFL +  H+   R +
Sbjct: 59  LQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVYRDV 118

Query: 114 QREFVRSGET----------------------------------------------NWLG 173
              F R+ ET                                               ++G
Sbjct: 119 GLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYFSGFVG 178

Query: 174 VLDGTYIMVNVRAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSTVDSRILRDA 188
            +DGT++ V V+   +  +  R    + N++ +CD K  F Y+  G  GS  D+ +L+ A
Sbjct: 179 AMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTAVLQIA 238

The following BLAST results are available for this feature:

BLAST of MELO3C033358 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058874.1	6.6e-88	77.63	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0048777.1	5.6e-87	83.65	retrotransposon protein [Cucumis melo var. makuwa] >TYK31557.1 retrotransposon p...	[more]
KAA0041241.1	3.0e-80	96.20	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0056587.1	3.3e-79	82.01	retrotransposon protein [Cucumis melo var. makuwa] >TYK24269.1 retrotransposon p...	[more]
KAA0047012.1	1.6e-78	89.94	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C033358 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C033358 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UUT3	3.2e-88	77.63	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U3B3	2.7e-87	83.65	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7THV6	1.4e-80	96.20	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DLW1	1.6e-79	82.01	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TU76	7.9e-79	89.94	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C033358 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	3.6e-15	29.52	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT5G28950.1	7.5e-13	46.88	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G43722.1	1.0e-09	23.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 124..189
None	No IPR available	PANTHER	PTHR22930:SF216	OS11G0577650 PROTEIN	coord: 124..189
None	No IPR available	PANTHER	PTHR22930:SF216	OS11G0577650 PROTEIN	coord: 31..123
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 31..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033358.1	MELO3C033358.1	mRNA