MELO3C033337 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033337
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	NBS-LRR type resistance protein
Location	chr08: 19439985 .. 19440438 (+)
RNA-Seq Expression	MELO3C033337
Synteny	MELO3C033337

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAATCATGGACGAACAAGGATGCTAGACAAAAGTAGCCTTACAATTATAGTAGTGGGTCCAAGTCGTTTCTACAACGACGACATGAGCTCATTGAGAAACGAGGTCAGCCAGTTAACCATGTGGAGTTATTTAGAGAAACACACAATCGGAGTGGTCAATTTGTTTCAAAAGTGGCATAGGATGCACATGTAAGTTCATGCAGTACTCTTGTCTTATTTTGTATTTTTATTTATACCTTCATAGCTTAATTACAAAATTTGGTGCAGAATCAAATGTTGGAACTCTAGTCCTAGCCCACCTCAGAGGTTTCTTAGCCAGTCGAGATCGTTTTGTGCTAGTAGTTTTTCGACCTCATTTTCGTAATCTAAGAAGGTTAAAAAAAGCTAAAGTCCTAATTGAGCAGAAAAGACTCAAGCTTGAAGAAGCTAAATGCATGATTAAAGAATAG

mRNA sequence

ATGAGCAATCATGGACGAACAAGGATGCTAGACAAAAGTAGCCTTACAATTATAGTAGTGGGTCCAAGTCGTTTCTACAACGACGACATGAGCTCATTGAGAAACGAGGTCAGCCAGTTAACCATGTGGAGTTATTTAGAGAAACACACAATCGGAGTGGTCAATTTGTTTCAAAAGTGGCATAGGATGCACATCTTAATTACAAAATTTGGTGCAGAATCAAATGTTGGAACTCTAGTCCTAGCCCACCTCAGAGGTTTCTTAGCCAGTCGAGATCGTTTTGTGCTAGTAGTTTTTCGACCTCATTTTCGTAATCTAAGAAGGTTAAAAAAAGCTAAAGTCCTAATTGAGCAGAAAAGACTCAAGCTTGAAGAAGCTAAATGCATGATTAAAGAATAG

Coding sequence (CDS)

ATGAGCAATCATGGACGAACAAGGATGCTAGACAAAAGTAGCCTTACAATTATAGTAGTGGGTCCAAGTCGTTTCTACAACGACGACATGAGCTCATTGAGAAACGAGGTCAGCCAGTTAACCATGTGGAGTTATTTAGAGAAACACACAATCGGAGTGGTCAATTTGTTTCAAAAGTGGCATAGGATGCACATCTTAATTACAAAATTTGGTGCAGAATCAAATGTTGGAACTCTAGTCCTAGCCCACCTCAGAGGTTTCTTAGCCAGTCGAGATCGTTTTGTGCTAGTAGTTTTTCGACCTCATTTTCGTAATCTAAGAAGGTTAAAAAAAGCTAAAGTCCTAATTGAGCAGAAAAGACTCAAGCTTGAAGAAGCTAAATGCATGATTAAAGAATAG

Protein sequence

MSNHGRTRMLDKSSLTIIVVGPSRFYNDDMSSLRNEVSQLTMWSYLEKHTIGVVNLFQKWHRMHILITKFGAESNVGTLVLAHLRGFLASRDRFVLVVFRPHFRNLRRLKKAKVLIEQKRLKLEEAKCMIKE

Homology

[Close]

BLAST of MELO3C033337 vs. NCBI nr
Match: KAA0067904.1 (flocculation protein FLO1-like [Cucumis melo var. makuwa])

HSP 1 Score: 106.7 bits (265), Expect = 1.6e-19
Identity = 64/130 (49.23%), Postives = 81/130 (62.31%), Query Frame = 0


Query: 3    NHGRTRMLDKSSLTIIVVGPSRFYNDDMSSLRNEVSQLTMWSYLEKHTIGVVNLFQKWHR 62
            NHGRTR+LDKS+L IIV GPSR YN++ SSLRNE+SQ T+WSY EKHTI V N F++  R
Sbjct: 1208 NHGRTRLLDKSNLIIIVAGPSRCYNNNTSSLRNEISQSTLWSYSEKHTIRVTNSFRRRLR 1267

Query: 63   MHILITKFGAESNVGTLVLAHLRGFLASRDRFVLVVFRPHFRNLRRLKKAKVLIEQKRLK 122
            +HI  T                  FL S++                +++AKVLIEQ+RL+
Sbjct: 1268 IHISST-----------------SFLQSKE----------------VEEAKVLIEQQRLE 1304

Query: 123  LEEAKCMIKE 133
            LEEAKC I+E
Sbjct: 1328 LEEAKCKIEE 1304

[Close]

BLAST of MELO3C033337 vs. NCBI nr
Match: TYK23153.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 3.1e-15
Identity = 54/111 (48.65%), Postives = 66/111 (59.46%), Query Frame = 0


Query: 2   SNHGRTRMLDKSSLTIIVVGPSRFYNDDMSSLRNEVSQLTMWSYLEKHTIGVVNLFQK-- 61
           +NH RTR+LDKSSLTIIV GPSRFYND  SSL NEVSQLT+WSY  KH +GV   F++  
Sbjct: 104 TNHRRTRLLDKSSLTIIVAGPSRFYNDSTSSLSNEVSQLTVWSYSRKHMLGVARSFRRIK 163

Query: 62  -WHRMHI---LITKFGAESNVGTLVLAHLRGFLASRDRFVLVVFRPHFRNL 107
            W+        I K   +       L  +     S  + +L +FRPHFR L
Sbjct: 164 CWNSSPSPPQRILKIWVDDRATQKAL--VGNPSPSPAKVMLAIFRPHFRKL 212

[Close]

BLAST of MELO3C033337 vs. NCBI nr
Match: KAA0035152.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 3.4e-14
Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 2   SNHGRTRMLDKSSLTIIVVGPSRFYNDDMSSLRNEVSQLTMWSYLEKHTIGVVNLFQ 59
           SNHGRTR+L KSSLTII+VGPS FYND M SL+NEVSQLTM SY EK  +GVV+LF+
Sbjct: 78  SNHGRTRLLYKSSLTIIIVGPSHFYNDSMRSLKNEVSQLTMQSYSEKRMLGVVDLFR 134

[Close]

BLAST of MELO3C033337 vs. NCBI nr
Match: KAA0062189.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 82.8 bits (203), Expect = 2.4e-12
Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 1   MSNHGRTRMLDKSSLTIIVVGPSRFYNDDMSSLRNEVSQLTMWSYLEKHTIGVVNLFQKW 60
           MSNHGRTR+LD+SSLTII VG +RFYND  S LR + SQ TMWS  +KHT  +    ++ 
Sbjct: 29  MSNHGRTRLLDRSSLTIIAVGKNRFYNDSTSLLRRKESQSTMWSCFKKHTFELGRSCRRP 88

Query: 61  HRMHILITKFGAESNVGTLVLAHLRG 87
            RMHI I  + +  N+   V++H  G
Sbjct: 89  QRMHI-IKCWNSNPNLPQRVVSHSLG 113

[Close]

BLAST of MELO3C033337 vs. NCBI nr
Match: TYK18673.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 82.8 bits (203), Expect = 2.4e-12
Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 2   SNHGRTRMLDKSSLTIIVVGPSRFYNDDMSSLRNEVSQLTMWSYLEKHTIGVVNLFQKWH 61
           SN G TR LDKSSLT I+ GPS  YN  M SL NE++Q TMWS LEKH +G+ NLF +W 
Sbjct: 60  SNQGPTRQLDKSSLTTILEGPSHSYNVRMRSLNNEINQWTMWSCLEKHKLGLANLFHRWS 119

Query: 62  RMHI 66
           +M I
Sbjct: 120 QMRI 123

[Close]

BLAST of MELO3C033337 vs. ExPASy TrEMBL
Match: A0A5A7VKG1 (Flocculation protein FLO1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00670 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 7.6e-20
Identity = 64/130 (49.23%), Postives = 81/130 (62.31%), Query Frame = 0


Query: 3    NHGRTRMLDKSSLTIIVVGPSRFYNDDMSSLRNEVSQLTMWSYLEKHTIGVVNLFQKWHR 62
            NHGRTR+LDKS+L IIV GPSR YN++ SSLRNE+SQ T+WSY EKHTI V N F++  R
Sbjct: 1208 NHGRTRLLDKSNLIIIVAGPSRCYNNNTSSLRNEISQSTLWSYSEKHTIRVTNSFRRRLR 1267

Query: 63   MHILITKFGAESNVGTLVLAHLRGFLASRDRFVLVVFRPHFRNLRRLKKAKVLIEQKRLK 122
            +HI  T                  FL S++                +++AKVLIEQ+RL+
Sbjct: 1268 IHISST-----------------SFLQSKE----------------VEEAKVLIEQQRLE 1304

Query: 123  LEEAKCMIKE 133
            LEEAKC I+E
Sbjct: 1328 LEEAKCKIEE 1304

[Close]

BLAST of MELO3C033337 vs. ExPASy TrEMBL
Match: A0A5D3DHV0 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001660 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.5e-15
Identity = 54/111 (48.65%), Postives = 66/111 (59.46%), Query Frame = 0


Query: 2   SNHGRTRMLDKSSLTIIVVGPSRFYNDDMSSLRNEVSQLTMWSYLEKHTIGVVNLFQK-- 61
           +NH RTR+LDKSSLTIIV GPSRFYND  SSL NEVSQLT+WSY  KH +GV   F++  
Sbjct: 104 TNHRRTRLLDKSSLTIIVAGPSRFYNDSTSSLSNEVSQLTVWSYSRKHMLGVARSFRRIK 163

Query: 62  -WHRMHI---LITKFGAESNVGTLVLAHLRGFLASRDRFVLVVFRPHFRNL 107
            W+        I K   +       L  +     S  + +L +FRPHFR L
Sbjct: 164 CWNSSPSPPQRILKIWVDDRATQKAL--VGNPSPSPAKVMLAIFRPHFRKL 212

[Close]

BLAST of MELO3C033337 vs. ExPASy TrEMBL
Match: A0A5A7SV75 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002430 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.6e-14
Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 2   SNHGRTRMLDKSSLTIIVVGPSRFYNDDMSSLRNEVSQLTMWSYLEKHTIGVVNLFQ 59
           SNHGRTR+L KSSLTII+VGPS FYND M SL+NEVSQLTM SY EK  +GVV+LF+
Sbjct: 78  SNHGRTRLLYKSSLTIIIVGPSHFYNDSMRSLKNEVSQLTMQSYSEKRMLGVVDLFR 134

[Close]

BLAST of MELO3C033337 vs. ExPASy TrEMBL
Match: A0A5A7V928 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005820 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.2e-12
Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 1   MSNHGRTRMLDKSSLTIIVVGPSRFYNDDMSSLRNEVSQLTMWSYLEKHTIGVVNLFQKW 60
           MSNHGRTR+LD+SSLTII VG +RFYND  S LR + SQ TMWS  +KHT  +    ++ 
Sbjct: 29  MSNHGRTRLLDRSSLTIIAVGKNRFYNDSTSLLRRKESQSTMWSCFKKHTFELGRSCRRP 88

Query: 61  HRMHILITKFGAESNVGTLVLAHLRG 87
            RMHI I  + +  N+   V++H  G
Sbjct: 89  QRMHI-IKCWNSNPNLPQRVVSHSLG 113

[Close]

BLAST of MELO3C033337 vs. ExPASy TrEMBL
Match: A0A5D3D545 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold481G00100 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.2e-12
Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 2   SNHGRTRMLDKSSLTIIVVGPSRFYNDDMSSLRNEVSQLTMWSYLEKHTIGVVNLFQKWH 61
           SN G TR LDKSSLT I+ GPS  YN  M SL NE++Q TMWS LEKH +G+ NLF +W 
Sbjct: 60  SNQGPTRQLDKSSLTTILEGPSHSYNVRMRSLNNEINQWTMWSCLEKHKLGLANLFHRWS 119

Query: 62  RMHI 66
           +M I
Sbjct: 120 QMRI 123

The following BLAST results are available for this feature:

BLAST of MELO3C033337 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067904.1	1.6e-19	49.23	flocculation protein FLO1-like [Cucumis melo var. makuwa]	[more]
TYK23153.1	3.1e-15	48.65	NBS-LRR type resistance protein [Cucumis melo var. makuwa]	[more]
KAA0035152.1	3.4e-14	75.44	NBS-LRR type resistance protein [Cucumis melo var. makuwa]	[more]
KAA0062189.1	2.4e-12	51.16	NBS-LRR type resistance protein [Cucumis melo var. makuwa]	[more]
TYK18673.1	2.4e-12	60.94	NBS-LRR type resistance protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C033337 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C033337 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VKG1	7.6e-20	49.23	Flocculation protein FLO1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3DHV0	1.5e-15	48.65	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7SV75	1.6e-14	75.44	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7V928	1.2e-12	51.16	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3D545	1.2e-12	60.94	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of MELO3C033337 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 106..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033337.1	MELO3C033337.1	mRNA