MELO3C033308 (gene) Melon (DHL92) v4

Overview
NameMELO3C033308
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase
Locationchr04: 6405607 .. 6415095 (-)
RNA-Seq ExpressionMELO3C033308
SyntenyMELO3C033308
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAACGTTGGAGCAAATTCGGATTTTCATTTGGTGCTTTTTGATGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAGGAGGTCTCTGGTTTTTCTTGTATTTCAGAGTGTATCGGTAGAGTTAGAATTTCTATTGGTATGGTTGGAAAACTTATTCAATTTACTACAACTTTCATGAAGAAATTGTAAACCAAAAACGACTAAGAATTGGTTTAAATTGTAGGAACAAGTTAAAGAGGTCGTGTGCGCGCGATTCTGGAAGTGGTTCTGTTTTGAGGGTATATGTGTTTATGCACGGGGAATCAGATTTATATGTCTTCAGGTAAGTTTTAGAGGATCTCAAAATGAAGATTTTGATATAAAGAACACTCATTTTGGTTAAATATTGAGAAAGTTATAGTTCTTTGAAGTTTATGTTAGAAATCTGGAAATTTTAGAGAATTGTTGAAATAGGATTTTATTTCTTAAGCTTTGTTTTCGTGAGCGTCATCTTTGGTGCGACATGTTATGTATATCTTTAGGAAACCAGAATGTTTAAGGTTTTAATACTCGGTTGGGTTGTTGGCAGGCCGAGAAGAATTAAACCGAGCTTATAGACCAAGGATCTAGCCCAAGACTGTGAGTGACAAAACCAACTTTGAAATATTTTCCATAACTGTTATTATGATTGAATGCGATAAATGTTTATTTACGAAGCCATGAAAGGTATTTGAATTTCATGACTATTTTCAAGTATACATTTGGAGACTAGATTTCTTAAAGAAATTTATGCTAGCACGTAGATATTAAATGTTTGGAAAGTATTTAAACCACAATATTTTAAGCAAGCATGAATTAGTATGAAGTTTTGTTTTAAGAACTACAATTTTCCACGAAAGAGCTGAGTAAAGTTCGAGCTTTGTGTAAAATTTATAAGCAGGCATGTTTTAATATTTTATGATGATTTATGAAATTTTCATTAACTACATGACTGAGATCTTGAGCCTGAGGCTAGAGATTACCGTGTGCACACTGGTTAGATTTCGTTGTTGACGTTGAGTGTACTCCGTAACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGTGCTTGTAAACGTTGTTGTACTAGGTGTACCCTACACAACGTAGATTCGTCATGTTAGTTAAAATGCTTCGATATACTTGATATGCCTTGCTAGATTTCAATGATGAACATGCTGAGTATTTAAGGAAGCTATTCTTACTATTACACATTTACATTTACGACTTGTATAAACAGATTTATATGTGTAAAGTTTTCACGTGCTCTTATCTTTAAATTCATAGTTTTAAACTGAGTCACTCACTGAGCTCCATAGCTCACCCTTTCCAAAATGTTTTACCCATTTTCCAGGTAGAGATCGACTTCCCGGTGCCTGATAGACTGCCTTAGTCTGCGGAAGCTTCATTATCGATTGCCAGTACGTGTTTTGAGTTGGGCATAAAGTCTGTTGTGTTGTGATGTATTCACACCCTTGTATGTTATAGATACTCCACAGTTTGTATAAGCTTTAGGAGCTGTAGTTGTGTAAATTTTGTTGGTTATATTTTGATTAAGGTGTCTTTAGGTTTACTCGTGAAATTGGTAAATTTTGAGGTACACTTCATGTATGTGTTTGACTAGCTGTGTTTTGACTAGCCTAGGATCCGATGTGTTTTGTGGCATGTACAATAGTTTATATACTAGATTGGCAAGTTCATCACATGAAAGTTTTAAGCAGAGTCGACAGATACAGGTACAGAATAACGTTGTTCGTCGGCTTCACGCCATCTTTCGGTCTAAGGTAGCAGGTAGTCCGGGAGGGGGTGTGACAACTTGGTATCAGAGCAGTTTGCTCCATGGGAATTAAGGTAGAGCGGTTAGCTCTAAGAAGAAACTGGAAAGTAAATAATTGAACGTCAAGTTAGCTTAAAGGGAACTAGTGGAGTATGGTCGAGGTAAGGGTAGAAGTGAGTCCAATTATTATTAATACGTGAGTAGACATTTAGTATCATGCATTTGAGTTAAGTATTTATAGTATGTCTAATGTGTTGACATATTATAGGAGTCATGCCACCACGTACTGGTAGACGACGCCGGCAGAATCAGGACGGGATGCAAGGTCCTACCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAGGAGTTCGAGGTGGTGCAGGAAACGAGCAGTTTGCGAGAACAACACAGGAAATAGGAAGGACAGATAGAGCAGAGCCTAGTGATCCAGAAAAGGCATACGGAATTGAACGACTGAAGAAGTTAGGGGCTACAGTGTTTGAAGGTTCCACAGATCCAGCTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTGGCCATATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGACGCAGTGATGCACGTGCTTTAGACTGGCAGACTTTTAGAGGCATATTCGAAGATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGCTGAGTATGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGACGTTATTATAGCTTCTGAGAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAGTTTACAGCCATTGCTAAGTGGACGAATTTCTCTCAGTTAGTGGAGACTGCTCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATCGGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCGTGAGCAGCGGAGGTTCACGCCTGGGATAAATATTTCAAGCCGTCAAGATTTTAAGAATCGCTCTGGAGGCCAAGCATCGAGGAACGTGAGTTATGGTAGTGTTTTTCAGAGACAGAGCCAGAGAATACCTAGCCAACCCATTAGATCAACAGTAAGATCGCAACCAGGTCAGGAGTCCATTGCTAGTACCGTCAGGCGAATACCATGCACGAGTTGTGGCAGGAACCATCGGGGTCAGTGTTGGTAGGTGCCGGTGTATGTTACCAGTGCGGACAGCCAGGACATTTCAAGAAAGATTGTCCGCAGTTGAACATGACAGTTCAGAGAGATCAGGGAGTTGGGTCCCAGACAATTGAGCAATCGAGAGTTTCAGTGGTTCCAACAGAGGGTACCAGTGGTGCAAGGCAAAAGGGAGTTGTTGGAAGACCGAGGCAACAGGGAAAAGTCTATGCTATGACTCAACAAGAAGTAGAGGATGCACCAGACGTTATTACTGGTACGATTCTTATTTGTAATGTACCTGCAGACGTTTTATTTGATCCAGGTGCTACGCATTCCTTTGTTTCTAGTATATTTCTGACTAAGTTGAATAGGATGCTAGAGCCTTTATCTGAGGGGTTAGCTATATACACTCCAGTTGGTGACGTTTTACTTGTTAATGAGGTGTTACGTAATTGTGAAGTTTTAGTAGAAGGTATCAGTTTGCTAGTGGACTTGCTACCACTAGAGTTGCAGAGGTTAGATGTAATTTTGGGAATGGATTTCTTATTTGCTCATTATGCATCTATGGATTGCCATAGGAAGGAAGTGGTTTTCAGAAAACCAGGCTTTGCTGAAGTTGTTTTTAGAGGTATGAGGAAGGCCGTTTCTAGAAGTCTAATCTCAGTTTTGAAAGCTGAGAAATTACTGAGGAAGGGTTGCACAGCGTTTCTTGCACACATCGTAGTAGTGCAGAGAGAAAAACTAAAGCCAGAAGATGTTCCTATGGTGAAAGAGTTTCTTGATGTATTTCCAGATGATCTGTCAGGTTTGCCACCTGATAGAGAGATTGAGTTCACCATTGAATTATTACCAGGAACAGCACCTATTTCACAGGCGCCGTATAGAATGGCTCCAAGCGAGCTAAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATCAGGCCTAGTGTTTCGCCGTGGGGAGCACCAGTGCTTTTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCGATGACTTATTTGATCAACTAAGGGGAGCAACGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTGCTAAGACAGCATTTAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGTTTAACGAATGCGCCAGCGGTTTTCATGGATCTCATGAACAGATCTTCCATCGGTATTTAGATCAGTTTGTGATTGTGTTCATTGATGATATATTAGTTTACTCAGTTGACAGAGAATCTCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGAAAACAGTTATACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAACAGGTAGTATTTTTGGGGCATGTAGTTTCAGCAAAAGGAGTAGTGTCGATCCACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAGACCAATTAGTGCGACAGAAGTACGTAGTTTCCTGGGTTTGGCAGGATACTATAGGCATTTTATTGAGGATTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGGAAGAATGTTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTTACAGCACCTATTTTGGCACTTCCTGTAACAGGGAAGGACTATGTGATTTATTGTGATGCTCAAGGCTAGGATTAGGTTGTGTGCTTATGCAAAATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTTATCAAAAAGAGCTAAATATGAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAGTATCATCCAGGTAAGGCCAACGTAGTAGCAGATGCATTAAGTAGGAAGTCAAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGTAGCTTTGTTGAATGAGTTAAGAGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGGTTCGGTCTTCTCTAGTAACTGAGATTGTAAGAAGACAGTCAGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTGAGCTGAGAACAGATGGAGCCATTGTTAAACAAGGAAGATTATGTGTTCCGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGCTATGCATCCAGGTAGCACCAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGTCTGGAATGAAGCAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTGTCAACAGGTTAAACCAGTAAGACAGAGGCCAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTCGTACATCCAGTGGACATGATGGTATATGGGTAATAGTAGACAGACTCACCAAGACGACACGATTTATACCGATTAAAATGACATCTACGTTAGACCAGCTAGCGAGATTATATGTTGATAAGATTGTGAGTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAACAGGGCTAAAGTTTAGTACATCATTTCATCCCCAAACAGATGGTCAGTCCGAGAGGACCATCCAAACTTTAGAGGACATGTTGAGAGCATGTGTCCTACAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAACTATCAGTCTAGTATCGGTATGGCACCATATGAAGCCTTATACGGGAGACCATGCAGAACTCCTGTGTGCTGGAATGAAGTGGGAGAGCGGAAGTTAGTAGGTCCTGAGTTGGTTCAGATTACGACAAACAATATTAAGTTGATCAGAGAAAATCTGAGGAAAGCCCAAGATCGACAGAAAAGTTATGCGGATAAGCGACGAAGAAACTTAGAATTCCAAGTTGGAGATCAAGTTTTCTTGAAATTATCTCCATGGCGAGGTGTTATTCGTTTCGGAAGAAAAGGTAAGTTAAGTCCTAGATATATTGGGCCATATCAGATAACGGAACGAGTGGGACCAGCAGCGTATAGACTTGAGTTGCCAATAGAACTTGCACGAATACATGATGTTTTCCATGTATCCATGTTAAGAAAATATATACCAGATCCATCGCATGTGTTGCAAGATCAACCAGTTGAATTAAAAGAAGATTTGAGTTATGTTGAAGAACCAGTTCAGATTCTCGACAGAAAGGAACAAGTTTTGAGAAACAAAACGATTCCACTCATAAAAGTTTTGTGGAGACATCATGGAGCGGAGGATGCAACTTGGGAACCAGAATATCAGATGAAGAAGAGCTATCCGATACTTTTCAGTTAAGGACATTCTAAATTTCGAGGACGAAATTTTCTAAAGGGAAGGTAAGTTGTAAACCCGATATTTTCTTGGTTTAATTTCTTTAAATGTGGAAAAAAAAAAAGAAAAAAAAATGGAAATTAAGTGTAAATATAAATATATATATTTATATATTAAATAGTTTTATTAAATTAATTAAAGAAAAGAAAGAAAAGAAAGGACAAAAAGAAGAAAAGGAGAAGAAAATTTCATTTTCTCTTTTCTTCTTCTTCTTCTCTTCCCTTCACCGCCAAGTTTGAAGACAACCAAGTTTCCTTTATTTTTTTTTCTTTTTCCTTCTTCAATTTGCAGAGAACTTCTAAGAGAGAGTTTGGAAGAAGAAGAGAAATTTTACTAGAATTTTTTTAGGTTGAAGAAGAGGAGGAGAACTCAAGCAAAGTGTATCAATGGCTGAATTTTAGTTCATTCTGCACATCACTGGTTTTTAATTCGGTTTGAACTCTTCAAAAGGAATTAAGAGGTGAGATTTACATTTACTGAAAGTTAACTCATTTTTAAACAAACTTTATGAAGAACGTTGGAGCAAATTCGGATTTTCATTTGGTGCTTTTTGATGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAGGAGGTCTCTGGTTTTTCTTGTATTTCAGAGTGTATCGGTAGAGTTAGAATTTCTATTTGGTATGGTTGGAAAGCTTATTCAATTTACTACAACTTTCATGAAGAAATTGTAAACCAAAAACGACTAAGAATTGGTTAAATTGTAGGAACAAGTTAAAGAGGTCGTGTGCGCGCGATTCTGGAAGTGGTTCTGTTTTGAGGGTTATATGTGTTTATGCACGGGGAATCAGATTTATATGTCTTCAGGTAAGTTTTAGAGGATCTCAAAATGAAGATTTTGATATAAAGAACACTCATTTTGGTTAAATATTGAGAAAGTTATAGTTCTTTGAAGTTTATGTTAGAAATCTGGAAATTTTAGAGAATTGTTGAAATAGGATTTTATTTCTTAAGCTTTGTTTTCGTGAGCGTCATCTTTGGTGCGACATGTTATGTATATCTTTAGGAAACCAGAATGTTTAAGGTTTTAATACTCGGTTGGGTTGTTGGCAGGCCGAGAAGAATTAAACCGAGCTTATAGACCAAGGATCTAGCCCAAGACTGTGAGTGACAAAACCAACTTTGAAATATTTTCCATAACTGTTATTATGATTGAATGCGATAAATGTTTATTTACGAAGCCATGAAAGGTATTTGAATTTCATGACTATTTTCAAGTATACATTTGGAGACTAGATTTCTTAAAGAAATTTATGCTAGCACGTAGATATTAAATGTTTGGAAAGTATTTAAACCACAATATTTAAGCAAAGCATGAATTAGTATGAAGTTTTGTTTTAAGAACTACAATTTTCCACGAAAGAGCTGAGTAAAGTTCGAGCTTTGTGTAAAATTTATAAGCAGGCATGTTTTAATATTTTATGATGATTTATGAAATTTTCATTAACTACATGACTGAGATCTTGAGCCTGAGGCTAGAGATTACCGTGTGCACACTGGTTAGATTTCGTTGTTGACGTTGAGTGTACTCCGTAACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGTGCTTGTAAACGTTGTTGTACTAGGTGTACCCTACACAACGTAGATTCGTCATGTTAGTTAAAATGCTTCGATATACTTGATATGCCTTGCTAGATTTCAATGATGAACATGCTGAGTATTTAAGGAAGCTATTCTTACTATTACACATTTACATTTACGACTTGTATAAACAGATTTATATGTGTAAAGTTTTCACGTGCTCTTATCTTTAAATTCATAGTTTTAAACTGAGTCACTCACTGAGCTCCATAGCTCACCCTTTCCAAAATGTTTTACCCATTTTCCAGGTAGAGATCGACTTCCCGGTGCCTGATAGACTGCCTTAGTCTGCGGAAGCTTCATTATCGATTGCCAGTACGTGTTTTGAGTTGGGCATAAAGTCTGTTGTGTTGTGATGTATTCACACCCTTGTATGTTATAGATACTCCACAGTTTGTATAAGCTTTAGGAGCTGTAGTTGTGTAAATTTTGTTGGTTATATTTTGATTAAGGTGTCTTTAGGTTTACTCGTGAAATTGGTAAATTTTGAGGTACACTTCATGTATGTGTTTGACTAGCTGTGTTTGACTAGCCTAGGATCCGATGTGTTTTGTGGCATGTACAATAGTTTATATACTAGATTGGCAAGTTCATCACATGAAAGTTTTAAGCAGAGTCGACAGATACAGGTACAGAATAACGTTGTTCGTCGGCTTCACGCCATCTTTCGGTCTAAGGTAGCAGGTAGTCCGGGAGGGGGTGTGACAAAACTCTTGTTTGGTTATTGGTACCTAAATATTAGTTTCCTGATCTGTTGTTCTTTTTCTTTTTCAACTATTGCTTTTATGGTTGGTTTTCCTTTACCAATGCATTCATGTTGTAAGTTATGTTGTTAACATTGTATATGTTTGGGAGTTTATATATTTTTTCTTCTTCGTGTTTTGATTCTTGTTTTCTTGCTTAATTGAGAGGTCCCTTTGATGTCCTTGAGATTGACTTCGAGTATGTTTAAGTTGTTTCAAGACTTTTGAAATTCTGCACTTGCTATGTTGGAAATT

mRNA sequence

ATGAAGAACGTTGGAGCAAATTCGGATTTTCATTTGGTGCTTTTTGATGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAGGAGGTCTCTGGTTTTTCTTGAACAAGTTAAAGAGGTCGTGTGCGCGCGATTCTGGAAGTGGTTCTGTTTTGAGGATGATTTATGAAATTTTCATTAACTACATGACTGAGATCTTGAGCCTGAGGCTAGAGATTACCGTGTGCACACTGGTAGAGATCGACTTCCCGGTGTCTTTAGGTTTACTCGTGAAATTGGTAAATTTTGAGGTACACTTCATATTGGCAAGTTCATCACATGAAAGTTTTAAGCAGAGTCGACAGATACAGGTACAGAATAACGTTGTTCGTCGGCTTCACGCCATCTTTCGGTCTAAGGTAGCAGGTAGTCCGGGAGGGGGTGTGACAAAACTCTTGTTTGGTTATTGGTACCTAAATATTAGTTTCCTGATCTGTTGTTCTTTTTCTTTTTCAACTATTGCTTTTATGGTTGGTTTTCCTTTACCAATGCATTCATGTTGTAAGTTATGTTGTTAACATTGTATATGTTTGGGAGTTTATATATTTTTTCTTCTTCGTGTTTTGATTCTTGTTTTCTTGCTTAATTGAGAGGTCCCTTTGATGTCCTTGAGATTGACTTCGAGTATGTTTAAGTTGTTTCAAGACTTTTGAAATTCTGCACTTGCTATGTTGGAAATT

Coding sequence (CDS)

ATGAAGAACGTTGGAGCAAATTCGGATTTTCATTTGGTGCTTTTTGATGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAGGAGGTCTCTGGTTTTTCTTGAACAAGTTAAAGAGGTCGTGTGCGCGCGATTCTGGAAGTGGTTCTGTTTTGAGGATGATTTATGAAATTTTCATTAACTACATGACTGAGATCTTGAGCCTGAGGCTAGAGATTACCGTGTGCACACTGGTAGAGATCGACTTCCCGGTGTCTTTAGGTTTACTCGTGAAATTGGTAAATTTTGAGGTACACTTCATATTGGCAAGTTCATCACATGAAAGTTTTAAGCAGAGTCGACAGATACAGGTACAGAATAACGTTGTTCGTCGGCTTCACGCCATCTTTCGGTCTAAGGTAGCAGGTAGTCCGGGAGGGGGTGTGACAAAACTCTTGTTTGGTTATTGGTACCTAAATATTAGTTTCCTGATCTGTTGTTCTTTTTCTTTTTCAACTATTGCTTTTATGGTTGGTTTTCCTTTACCAATGCATTCATGTTGTAAGTTATGTTGTTAA

Protein sequence

MKNVGANSDFHLVLFDEENRAVGFHSKSGGLWFFLNKLKRSCARDSGSGSVLRMIYEIFINYMTEILSLRLEITVCTLVEIDFPVSLGLLVKLVNFEVHFILASSSHESFKQSRQIQVQNNVVRRLHAIFRSKVAGSPGGGVTKLLFGYWYLNISFLICCSFSFSTIAFMVGFPLPMHSCCKLCC
Homology
[Close]
BLAST of MELO3C033308 vs. NCBI nr
Match: KAA0037607.1 (uncharacterized protein E6C27_scaffold277G002620 [Cucumis melo var. makuwa])

HSP 1 Score: 100.1 bits (248), Expect = 2.1e-17
Identity = 68/116 (58.62%), Postives = 71/116 (61.21%), Query Frame = 0 

Query: 63  MTEILSLRLEITVCTLVEIDF----------------PVSLGLLVKLVNFEVHFI----- 122
           MTEILSLRLEITV TLVEI+F                PVSLGLLVK VNFEVHF+     
Sbjct: 1   MTEILSLRLEITVGTLVEIEFPCLIDCLSLRKLHYRLPVSLGLLVKSVNFEVHFMYVFDW 60

Query: 123 ---------------------LASSSHESFKQSRQIQVQNNVVRRLHAIFRSKVAG 137
                                LASSSHESFKQSRQIQVQ +VVRRLHAIFRSKVAG
Sbjct: 61  LCLTSLGSAVFCGMYNSLYTRLASSSHESFKQSRQIQVQKSVVRRLHAIFRSKVAG 116

[Close]
BLAST of MELO3C033308 vs. NCBI nr
Match: KAA0056684.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-16
Identity = 67/113 (59.29%), Postives = 76/113 (67.26%), Query Frame = 0 

Query: 36  NKLKRSCARDSGSGSVLRMIYEI-----FINYMTEILSLRLEITVCTLVEIDFPVS---- 95
           NKLKRSCARDSGSGSVLR+I        FI     +L+L +      +VEIDFPV     
Sbjct: 137 NKLKRSCARDSGSGSVLRVICVYARGIRFICLQISLLTLSVLRNNDAVVEIDFPVPDRLP 196

Query: 96  -LG--LLVKLVNFEVHFILASSSHESFKQSRQIQVQNNVVRRLHAIFRSKVAG 137
            LG  +   + N  ++  LASSSHESFKQSRQIQVQ NVVRRLHAIFRSKVAG
Sbjct: 197 YLGSDVFCGMYN-SLYTRLASSSHESFKQSRQIQVQKNVVRRLHAIFRSKVAG 248

[Close]
BLAST of MELO3C033308 vs. NCBI nr
Match: KAA0035073.1 (uncharacterized protein E6C27_scaffold57G001380 [Cucumis melo var. makuwa])

HSP 1 Score: 84.7 bits (208), Expect = 9.0e-13
Identity = 63/122 (51.64%), Postives = 69/122 (56.56%), Query Frame = 0 

Query: 36  NKLKRSCARDSGSGSVLRMIYEI-----FINYMTEILSLRLEITVCTLVEIDF------- 95
           NKLKRSCARDSGSGSVLR+I        FI     +L+L +      +VEIDF       
Sbjct: 95  NKLKRSCARDSGSGSVLRVICVYARGIRFICLQIPLLTLSVLRNNDAVVEIDFPVPVDCL 154

Query: 96  ---------PVSLGLLVKLVNFEVHFILASSSHESFKQSRQIQVQNNVVRRLHAIFRSKV 137
                    PVSLGLLVK VNFE               SRQIQVQ +VVRRLHAIFRSKV
Sbjct: 155 SLRKLHYRLPVSLGLLVKSVNFE---------------SRQIQVQKSVVRRLHAIFRSKV 201

[Close]
BLAST of MELO3C033308 vs. NCBI nr
Match: KAA0056192.1 (hypothetical protein E6C27_scaffold431G00190 [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-11
Identity = 43/47 (91.49%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 102 LASSSHESFKQSRQIQVQNNVVRRLHAIFRSKVAGSPGGGVTKLLFG 149
           LASSSHESFKQSRQIQVQ NVVRR HAIFRSKVAGSPGGGVT L FG
Sbjct: 9   LASSSHESFKQSRQIQVQKNVVRRFHAIFRSKVAGSPGGGVT-LHFG 54

[Close]
BLAST of MELO3C033308 vs. NCBI nr
Match: KAA0056677.1 (hypothetical protein E6C27_scaffold73G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 1.7e-11
Identity = 43/47 (91.49%), Postives = 44/47 (93.62%), Query Frame = 0 

Query: 102 LASSSHESFKQSRQIQVQNNVVRRLHAIFRSKVAGSPGGGVTKLLFG 149
           LASSSHESFKQSRQIQVQ +VVRRLHAIFRSKVAGSPGGGVT L FG
Sbjct: 9   LASSSHESFKQSRQIQVQKSVVRRLHAIFRSKVAGSPGGGVT-LHFG 54

[Close]
BLAST of MELO3C033308 vs. ExPASy TrEMBL
Match: A0A5A7T7T0 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002620 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.0e-17
Identity = 68/116 (58.62%), Postives = 71/116 (61.21%), Query Frame = 0 

Query: 63  MTEILSLRLEITVCTLVEIDF----------------PVSLGLLVKLVNFEVHFI----- 122
           MTEILSLRLEITV TLVEI+F                PVSLGLLVK VNFEVHF+     
Sbjct: 1   MTEILSLRLEITVGTLVEIEFPCLIDCLSLRKLHYRLPVSLGLLVKSVNFEVHFMYVFDW 60

Query: 123 ---------------------LASSSHESFKQSRQIQVQNNVVRRLHAIFRSKVAG 137
                                LASSSHESFKQSRQIQVQ +VVRRLHAIFRSKVAG
Sbjct: 61  LCLTSLGSAVFCGMYNSLYTRLASSSHESFKQSRQIQVQKSVVRRLHAIFRSKVAG 116

[Close]
BLAST of MELO3C033308 vs. ExPASy TrEMBL
Match: A0A5A7UNA3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00100 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 8.5e-17
Identity = 67/113 (59.29%), Postives = 76/113 (67.26%), Query Frame = 0 

Query: 36  NKLKRSCARDSGSGSVLRMIYEI-----FINYMTEILSLRLEITVCTLVEIDFPVS---- 95
           NKLKRSCARDSGSGSVLR+I        FI     +L+L +      +VEIDFPV     
Sbjct: 137 NKLKRSCARDSGSGSVLRVICVYARGIRFICLQISLLTLSVLRNNDAVVEIDFPVPDRLP 196

Query: 96  -LG--LLVKLVNFEVHFILASSSHESFKQSRQIQVQNNVVRRLHAIFRSKVAG 137
            LG  +   + N  ++  LASSSHESFKQSRQIQVQ NVVRRLHAIFRSKVAG
Sbjct: 197 YLGSDVFCGMYN-SLYTRLASSSHESFKQSRQIQVQKNVVRRLHAIFRSKVAG 248

[Close]
BLAST of MELO3C033308 vs. ExPASy TrEMBL
Match: A0A5A7SX02 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G001380 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 4.3e-13
Identity = 63/122 (51.64%), Postives = 69/122 (56.56%), Query Frame = 0 

Query: 36  NKLKRSCARDSGSGSVLRMIYEI-----FINYMTEILSLRLEITVCTLVEIDF------- 95
           NKLKRSCARDSGSGSVLR+I        FI     +L+L +      +VEIDF       
Sbjct: 95  NKLKRSCARDSGSGSVLRVICVYARGIRFICLQIPLLTLSVLRNNDAVVEIDFPVPVDCL 154

Query: 96  ---------PVSLGLLVKLVNFEVHFILASSSHESFKQSRQIQVQNNVVRRLHAIFRSKV 137
                    PVSLGLLVK VNFE               SRQIQVQ +VVRRLHAIFRSKV
Sbjct: 155 SLRKLHYRLPVSLGLLVKSVNFE---------------SRQIQVQKSVVRRLHAIFRSKV 201

[Close]
BLAST of MELO3C033308 vs. ExPASy TrEMBL
Match: A0A5A7UJY2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold431G00190 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 6.3e-12
Identity = 43/47 (91.49%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 102 LASSSHESFKQSRQIQVQNNVVRRLHAIFRSKVAGSPGGGVTKLLFG 149
           LASSSHESFKQSRQIQVQ NVVRR HAIFRSKVAGSPGGGVT L FG
Sbjct: 9   LASSSHESFKQSRQIQVQKNVVRRFHAIFRSKVAGSPGGGVT-LHFG 54

[Close]
BLAST of MELO3C033308 vs. ExPASy TrEMBL
Match: A0A5A7UPX3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00010 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 8.2e-12
Identity = 43/47 (91.49%), Postives = 44/47 (93.62%), Query Frame = 0 

Query: 102 LASSSHESFKQSRQIQVQNNVVRRLHAIFRSKVAGSPGGGVTKLLFG 149
           LASSSHESFKQSRQIQVQ +VVRRLHAIFRSKVAGSPGGGVT L FG
Sbjct: 9   LASSSHESFKQSRQIQVQKSVVRRLHAIFRSKVAGSPGGGVT-LHFG 54

The following BLAST results are available for this feature:
BLAST of MELO3C033308 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0037607.12.1e-1758.62uncharacterized protein E6C27_scaffold277G002620 [Cucumis melo var. makuwa][more]
KAA0056684.11.7e-1659.29DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0035073.19.0e-1351.64uncharacterized protein E6C27_scaffold57G001380 [Cucumis melo var. makuwa][more]
KAA0056192.11.3e-1191.49hypothetical protein E6C27_scaffold431G00190 [Cucumis melo var. makuwa][more]
KAA0056677.11.7e-1191.49hypothetical protein E6C27_scaffold73G00010 [Cucumis melo var. makuwa][more]
BLAST of MELO3C033308 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033308 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T7T01.0e-1758.62Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7UNA38.5e-1759.29Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73... [more]
A0A5A7SX024.3e-1351.64CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5A7UJY26.3e-1291.49Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UPX38.2e-1291.49Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C033308 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033308.1MELO3C033308.1mRNA