MELO3C033255 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033255
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr08: 14366685 .. 14369495 (+)
RNA-Seq Expression	MELO3C033255
Synteny	MELO3C033255

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTGTTGGTGGCAGAAAAGTCGTCTACAGATGTTCTCGGCTGCGTCGGCATATTCTGGGAGAAGAAAGAAAGAATCGGGAAAAAAAGAAAAACCCTACTTTTATTTTAAAAGAATTGCCGATGATAATTTTAATTCTGTCACCGTTTGTCCATCTAAGCCGACGGTCATAATCCACCGTCGGCATATGTCTACAAATACCGACAATAAAAAAAATATGTCATCGACAAAAACATATCTACGCCAACGCTATAATTATTGTCATTGGCGATTCCACTTATTGCCGAGATAACACAATTTGTCAGCGTATACCACTTCTACTGACGAACTTTAAGGGCGTCAGCATGTTTGTCGTCGGTAAAGGTAAAATTTCTTGTAGTGCAAGTAGTAATTTTTAATTTATGCTCAAGGTTGAACTCAACCAAGTGATGAGTATATTTATAATTTATTTTGTAGGTTGAACTCAACCAAACGTGCCATTTGTTTGCATATATATCGTGCCTGAGACAGAAGATTATTGATATGAGGCTGATGTTATACCCCAAGAAGATCATATTAAAAAACTTACAGTAAGCCCGCTCATCAAAACATTGAAAAGAAATGCACCAAATAACATTTTCATCTCAAGTAATTGAATGATTTTCATGAGTATTTATTACGGTGTTTGCTAATGGTTTGCTTCTCATTCCAAGAGCCCGTTGTAGTTTCCATGGTTGAGAGTTGTTTTTTTTTTTTTTTTAAGTAAGATTAATTGTTATGTAAGTGACATCTGTTAGTTTGCCAATTTTATTTTGAATTCTTGAATTTTTTTTACTTATTTTCTAGGAGATAAGGAGTGCAAAGATTGAAAGGAAGAAAAAAATTGTACTAGATGAACACGTTTTGGTGAACTCGTGATTCAAAGTCTTTTATTGATATTTTGTACATACTTTTGAGATAGGTTTGTGTTGATGATTGTGAACTTTGCTTTGTTAGGTTATTTTTGGTTTAATGAGTCCTTTGAACTAAGTAGTAAATTATGGACCTACTGACTTTATTATCTTTGCTAATATCCATGGACAATATTTTACTCTTTATTCAACAGCTTTTTATTTTATAGTGTTGTCTTTAGAAGTCCAATTTCAGTTAACCTGCTGCTTTCATACATTCAAATTTCAAATTTCTCATTGTAGAGACCTTGTAAATATTTTTGGAGAGTTTCTTCCAAAAGTTAGTGCTTGTAAAGTATAGCTAGTAATTCTTCCTCATACTTCATTATACGTATCAAGGTGTGTTGGGCTTAAAACTTTTTAGTGCACATCAATGAGCTTTTAAATCCTTTGCAAATGTACGTACCTCTCACTGTGTTATAGTTTTATTGCCTCATAATGTAAATTATTTGGATACTCAAGTAATGAATTTTGGAATGAATGAAAATTATTTGGATACTTGGTTCTATATTCTACTATGGTTTCTTACATAGCACTTTAAGGTGCTTACATGTTTTTTTAAAACATGAATGATGGTCTTTGATTCAAATCTTAGTGTGGATTCTGTTGCTTGTAAACAATATTGCACTTATGAGCTATTTTTATGACATAGATCTTTGGAGTTTGTAGAAATGATAGACTAATGTGTGAAAATTCATAGACTACTGATGAACTAAAACTGATGTAAATCTTTATTCTCTACCACATTTTGCCATTAACTTCATGAATTTATCAAGGTGATCTAGACAGTTAGTTGTTAATTGCTACGATATAATGTATTATTGGGATGGGTAAGAATGGATGAGATGAACATTGAGATAGGTGTTGAAACATCTTATAGTTTCTAATTGTTTGCTTCTTTTCTTGGAGAATACTTTGTTGTTCTTACTATAACCTTTGTAGAACTATTTGCCAGGTAGGTGCTTCTTGCATACTTGAGAAGCAAGGCACAAATAGACACAACATAAAGAACAAAAATATTTTTATCAAGTGTCATAATGTCCAGATATTTTAGAAGGAGGTTATGTCTAAATTAAGATGGCTAAAATACAGCTACCATGTTCAATATCAATGAGGTAAGGTTATCTTAGAACTTAGTAATATGCAGTTTTTTGAAGTTCATCAAATTATATACTTGCATATGTTGTTGATTAAAATTTTCATTGATTTAGTATCTGTAACTTGAATACACTTTTTGCTAAGATGAGACACTCTGTTTTACTTGCCAGGTGCTAAAAGTTGTTCTCAGCCTTCTTCAAATCCCAGCACTTCATAATCCATTTTCATTCAAAAGGTTGTTTTTCTCTCCTTTTGTACTTTGTGCTAGTGCATCATTTGATCAAATTTTTTGCTTTTAGCCATTGATATGCTTGTAAGTGTTTTAGCTTTGAGTTTTGTTATTCGCTGTTGGTTTTGGCATTTTTGTGAAGTTCCGTAATGAATTTAGCTAAGTTTGTGGTCTGAATTTGGTGTTTGCGATTATGTTTTTCTTCTTTTGCATATGGATGAATTTTGTACATTGTGTACTTAAACAGTAGCATAATTTTGTGACTCGTATATGTAAGGCTTTCCATTTGAATACCCTGTACATTTCCAATACCAAGCTTAGAAGTTATAGAAAAGAATAATTCATTACCAAGCTTAGAAGTTATTATTCTTGAAGTGTGTATGTGCTCTGTGTTGTTGAAGTGTGTTGTTGAAGTGAATATGATGTGTTTATGTGGGTGAATGTTTTGTCTTGTTGAATCATTTTTTTTCTTTTCTTTTCTTACTAGGTTTTACCACAATCCATTGGAGCAATTAATGAAGCCATATTTACGCCAATTCATTGATGTATAG

mRNA sequence

ATGGAGGGTGTTGGTGGCAGAAAAGTCGTCTACAGATGTTCTCGGCTGCGTCGGCATATTCTGGGAGAAGAAAGAAAGAATCGGGAAAAAAAGAAAAACCCTACTTTTATTTTAAAAGAATTGCCGATGATAATTTTAATTCTGTCACCGTTTGTCCATCTAAGCCGACGGTTGAACTCAACCAAACGTGCCATTTGTTTGCATATATATCGTGCCTGAGACAGAAGATTATTGATATGAGGCTGATGTTATACCCCAAGAAGATCATATTAAAAAACTTACATAAGATTAATTGTTATGAGATAAGGAGTGCAAAGATTGAAAGGAAGAAAAAAATTGTACTAGATGAACACGTTTTGGTGAACTCTATCTGTAACTTGAATACACTTTTTGCTAAGATGAGACACTCTGTTTTACTTGCCAGGTTTTACCACAATCCATTGGAGCAATTAATGAAGCCATATTTACGCCAATTCATTGATGTATAG

Coding sequence (CDS)

ATGTTCTCGGCTGCGTCGGCATATTCTGGGAGAAGAAAGAAAGAATCGGGAAAAAAAGAAAAACCCTACTTTTATTTTAAAAGAATTGCCGATGATAATTTTAATTCTGTCACCGTTTGTCCATCTAAGCCGACGGTTGAACTCAACCAAACGTGCCATTTGTTTGCATATATATCGTGCCTGAGACAGAAGATTATTGATATGAGGCTGATGTTATACCCCAAGAAGATCATATTAAAAAACTTACATAAGATTAATTGTTATGAGATAAGGAGTGCAAAGATTGAAAGGAAGAAAAAAATTGTACTAGATGAACACGTTTTGGTGAACTCTATCTGTAACTTGAATACACTTTTTGCTAAGATGAGACACTCTGTTTTACTTGCCAGGTTTTACCACAATCCATTGGAGCAATTAATGAAGCCATATTTACGCCAATTCATTGATGTATAG

Protein sequence

MFSAASAYSGRRKKESGKKEKPYFYFKRIADDNFNSVTVCPSKPTVELNQTCHLFAYISCLRQKIIDMRLMLYPKKIILKNLHKINCYEIRSAKIERKKKIVLDEHVLVNSICNLNTLFAKMRHSVLLARFYHNPLEQLMKPYLRQFIDV

Homology

[Close]

BLAST of MELO3C033255 vs. NCBI nr
Match: XP_008447319.1 (PREDICTED: uncharacterized protein LOC103489789 [Cucumis melo])

HSP 1 Score: 71.6 bits (174), Expect = 6.4e-09
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0


Query: 46  VELNQTCHLFAYISCLRQKIIDMRLMLYPKKIILKNL 83
           VELNQTCHLFAYISCLRQKIIDMRLMLYPKKI L+NL
Sbjct: 255 VELNQTCHLFAYISCLRQKIIDMRLMLYPKKIRLENL 291

[Close]

BLAST of MELO3C033255 vs. NCBI nr
Match: XP_016902535.1 (PREDICTED: uncharacterized protein LOC103499160 [Cucumis melo])

HSP 1 Score: 54.7 bits (130), Expect = 8.1e-04
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 46  VELNQTCHLFAYISCLRQKIIDMRLMLYPKK 77
           VELNQTCH FA ISCLRQKII M+LMLYP++
Sbjct: 181 VELNQTCHFFADISCLRQKIIAMKLMLYPRR 211

[Close]

BLAST of MELO3C033255 vs. ExPASy TrEMBL
Match: A0A1S3BH46 (uncharacterized protein LOC103489789 OS=Cucumis melo OX=3656 GN=LOC103489789 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.1e-09
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0


Query: 46  VELNQTCHLFAYISCLRQKIIDMRLMLYPKKIILKNL 83
           VELNQTCHLFAYISCLRQKIIDMRLMLYPKKI L+NL
Sbjct: 255 VELNQTCHLFAYISCLRQKIIDMRLMLYPKKIRLENL 291

[Close]

BLAST of MELO3C033255 vs. ExPASy TrEMBL
Match: A0A1S4E3H9 (uncharacterized protein LOC103499160 OS=Cucumis melo OX=3656 GN=LOC103499160 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.9e-04
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 46  VELNQTCHLFAYISCLRQKIIDMRLMLYPKK 77
           VELNQTCH FA ISCLRQKII M+LMLYP++
Sbjct: 181 VELNQTCHFFADISCLRQKIIAMKLMLYPRR 211

The following BLAST results are available for this feature:

BLAST of MELO3C033255 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447319.1	6.4e-09	94.59	PREDICTED: uncharacterized protein LOC103489789 [Cucumis melo]	[more]
XP_016902535.1	8.1e-04	80.65	PREDICTED: uncharacterized protein LOC103499160 [Cucumis melo]	[more]

BLAST of MELO3C033255 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C033255 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BH46	3.1e-09	94.59	uncharacterized protein LOC103489789 OS=Cucumis melo OX=3656 GN=LOC103489789 PE=...	[more]
A0A1S4E3H9	3.9e-04	80.65	uncharacterized protein LOC103499160 OS=Cucumis melo OX=3656 GN=LOC103499160 PE=...	[more]

BLAST of MELO3C033255 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033255.1	MELO3C033255.1	mRNA