MELO3C033243.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C033243.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionMuDR family transposase
Locationchr08: 13100896 .. 13106207 (+)
RNA-Seq ExpressionMELO3C033243.jh1
SyntenyMELO3C033243.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAATCTCATTCACCCCTATGGCCCGGCCCCTATACATGTTGATTTTGCAACTGCAATCTATCACGCTGGTGGAAAAAGGGAAATCTACAAACATTTTGGAACTACTAGTTGTCTGATCCATCAGCCAAGTGAGTAAATTTCAATGTCAATCTACTTCTTTGTGCATAAAAAATGTTTGTTTGATAAAGCCTGAAGTAGACCAACCTAAGTTGATATTGGATATTTTATAGGTGCAGCATTTTGACGATCAGCTCTACTGTGGAATCTTGAAAATTTGTTATGACGAGTAGCCTGGTCACAAGGCTTGCTTATCTTAAACAAATTTAAGAATTTGACTTTACGGAGAAAGTTTACTTAAGGGCGCCACTAATTCGCAAGACAAAATCCCTTTCAATACGTATCAACATGGCTTACTTAAAACCTCCCACAGTTACGAGGCTCTTAGTTGTAAAGAATTGTTTTTAAAATTCTTTTGCACATTCCTTCCACCTATGTAAAATCCCAAATTAATGATAATTTAATTTTAGTTATGTTAAGTATAATTTTAAAAATTTTGGGTGTAATTTTCTTTCAAGTTGGAATTTTGATTAAGGTTATTTGTTTTAAGAGATTTCTAATCGGAGAAATTTGATTTAATTGGATGTGTTTATTAATTAATTAAATTTGAAGTTGAAATAATTATATTATTTAGATAATATAATTAGGTAAGGGTATTTATTTGGAAAACTTACATAAATATAATAAAATTATAAACTATTTATAGTCTATATAACAAGCTATTAAGGTAAATTATTTTTTCGGAATTCTTTATTTGCCCTTAATCTTTTATAACGATCTTTCAAATATGATTTTCTTCATGATCGTCGTTTTCGAGTTATTCATCTTGTCTTTTATATATGTTTCATCTTTATCATTTTTTGTCTTTTTCATAATTTTCGACAACGTTCGCTCTCATATCCATCATCTTCGATAACATTGTTTCTCTTGTCATCTAGGACAATTAAGATCGCGTATATTGTTCTGTTAATATCGTTTCAGTTATTTTGGTTTCGGTGAGCGTTCTAAATATTGTTTTTTCTTTGAACTATTTAGTTGATTATAAAATTTCGTTTAGAATTATATATTTCAGCGTGAAGATAGAATGTTTAGAATATGTAGGTATTACTGTAAGACATTCTTTATTTGGTTATGAAGATCGTTGAAGATTTTGATTACTGTTTACATTGATTCAAGAATTTATATTTTAGTATGTTGTTTGTAAGAATTTAAGGGTTTGTTTTTCCTTTTGAACTTTTAAGAATCATCGTAAGAATTGTGTATTTCATTATAAAGATTGATAGTTTGAAGTTTTTCAGGATAATTTTCATTGATTTACTTAATCGTTTACCTCTATCAATATACAGACGATCGTTTTGAAGATCGTTTACCTTTATCAATATACAGACTTTTTTGTTATATATCGTTTAACAATATACAGACGATTGTTTTGTTATATGAATAGATTGTTCATCTTTATGAACACGCAAATTTTCAATATTTTGTATGATCAGCGTCTTTAAACGATCGTGTATCAAATTCAATACAATTGTTTAAACGATTAGCATCTTTAAATGATCGCATATCAAATTCAATAGATGGTTTAAACGATCAGTATCTTTGAACGATAGTGTATCAAATTGAATACGATAGTTTAAACAATCAGTATCTTTAAACGATCGTCTATAACTTATTTTATACGATGATTTAATTTAATATATACGATCGTCTATTGGTGTTAAACGATCGTTTAGTATTCTCTTATTACATCTAAATACTTAATTATATTTTCTTATTTTCCATATTAGAATATCTATTCTTATTGGAGGTCAAATAGAATGGCTGCAATGTTTATGAAAATTACTCAGTGTTTGAAATTTTGGTAGATATGCGAGTCAGCTTTAATTCTTTGGCTGCTTTGACATGTGAATAACTTGAATTGGTTGAATCAGTTGAGTTATCTGTTTTACTTGATTTTGGTAAAAGTAATGTTCAAACTGTGGTACCAATAAAGAAGGATAATGATGTTGCTTGGTATTTAGCTTTTGCTAAAGATGCCACTAATAGACATCCATTAGTTGCCCATGTAAGTGTTAATTGTTTGAGAACGTCTTCTTCATCTAGTAACATACGAGAGAATGTTGATATGTCACTGAATATAAGTTTTTCTTCGTCTGTTTCAAATAATGAAGTTATAAGAGACATCTCATATTATTCGATTTGAAGGAAAAAAGTTTATTTGAAAGTAAATAAGTGCTTTCAAAGTGTTTTTGCATAATAGCAGCGAAGAACAACTTTCAATTTAGAACTACAACATCAAATTTGAGGTCTCTTGAATTTAGATGTTTGCAAGAATGCTGCAAATGGTATGTAAGGGCATCTTGTTATAAGAAGAGCGATATTTGGATGCTACGAAAATACACTTCTAACCATGATTGTTCATTGAGTATTGCCCAAAGTTCTCACATGCAAGCTTTTTCAATATTAATTGCCAATTGTTTGATAGATGATTTTAGATTCATGTCTACTGATCGTTCAATTCCTAAAGAGATTGTGCATAAGGCTCGTACAAATCTTGGAGTTAATATAAGTTACCAGAAAGCTTGGAGGGAAAAAGAACATATGATAAAGATATTATATGGTGACACAGTTGAATCGTATGCATTGATTCTAAGATTCTTTGATAAATTGGTTGAATCTAACCCACGTATGATAAGTTTTTTATATCAATTTTAAATTGATATGTAGATAGATGTGGATAGACTAATATCACAATCTATCTAGATAGACCAATATTGACATCTTTCATATTTTTTCTATTCTTTTTTGTTTTTGCTAATAGAAATGTGTTTTTAATTATTATAGATACATGCACTACTTTAGAAATGAATGATAGTGGTCATTTCAAGTTTTGTTTTATGTCTTTTGGTGCATCAATTGAGGGGTAAAAATATTGTGCATCAATTCAAGTTTTGAAGTGTAAGTTTGGTGGCATCCTATTAACAGCCTCATCACAAGATGATAACAATCAAATCTTCTCTCTTTCTTTTTCCATTGTAGATTCTGAAAATGATGTATCATGGACATGGTTTTTTGAGAAGATACGAGGTAGTTTTGCATAGCAGGCTAATTTAGTCATTATTTCTTATAGGCATCTTAGCATCCCCAAAAGAGTTTTAAGAGTGTTTCTTGATGTTGAGTAGTGTGTGTGCACAAAACATCTTTTAAGTAACTTGAAACTCCATTTTAAGAATCCAATACTTGATAAGTACTTCTTTAGCTGTGCTTATGCCTACACTATTGAAGAATTTGAGTACCACATGAGATGCATGGAGTTTGTTTGTTTAAATATTAGAGATTATCTTAGTAGTGTTGGTTTTGAGAAGTGGTCTCGGGCATATTCACGTAGACGAAGGTATAGAATGATGACATCAAATTGTACAAAAAGTGTAAATTCAGTGTTTAAAGATCTTAGAGAACTACTTGTGGCAACGATGTTTGGTTTAATTATGGATGTATTACAAAAGTGATTTTATGAACAAAGTTAAGGTGCTTCTACAATGAAGAATCACTTGACTTCTTGGGCTAAGAACGTTTTGCGTTTAAAACATGAAAAGTCGAGAAGATTATTGGTTAGATTTTTTTTTTATCTCGGACAGTTAGAGATATATTGCTATCTTTGTATATCCAATAAATAAAGATAGCAATTTATCTGTTCCTGTCTCATATAGCCACTGATAGATTGATATCTATATATATCTTATTTATACAGAGATTGAAATCTATTTCTTCTTATTTTATTAATTGTCCTTATTTGTGTTATGTATTAAGTTGATCCAGTAAGTACAACTTATTTGTTACCTTTATTCCTTTTTCTTTCTTTATTTTTCTTTCTTCTGCCTTTGCTTTACACATTATTGATTTGCTACACAATGCTTGTTGATTCTTGCTTACCATCTATTTGTAAAAAAGAAGACTAATATAAATTATATTCAATGAAATATATACAATCAGTATAGAAACAGACATGTTTGTATATGGGATAGATCATGATAGATATAGATTGATCGAAATGAATATATATTAAAACCTCTTTGTATGCGATATAGATCTTGCTAGATATATATGGATGATGGAAATAGATCGAAATGAATATAAATTCAAACTTTTTTGTATGCAAGTCAGATCGTCGATCGCGACATTTTTGTTAAAGTAGTTACTAGGATATAAACGATTGATGAGGAAGACGATGAAAGAAAAAGTCTGAACAAGTTCCTTCACCTTTTTATAGGCCCTTCATTTTGATGGCATTTTTGTAATTACGAGTTGTTCGAATTTCTGTAAATGTTCGTTTATACTTATATAAACGATCGTTGAAATTTCTCTACATGATCGTGTATACTTAAACTTTTTCGTCATCTTTTACTGTTTATTACCTTATCGTTTATATAATGTATAGAATCGTGTATAATTATCATTTATATTTTCAAACATGATCAGACGCACATATTAGATAATCGTTAAAAATAATTTACGCGATCGTTAAAGATAATCGTTAAAGTACTTTGTTATCGTTTAGCGTTTATTGTTGGTCATTTATGTATTTGGTAATTTATAAGATCGTGTATCAATTGTATATTATTCTACACGATGCCATTTAATAATCGTTTATTAACATTAGTCGAGCACGGAAGAACGATTAATCGCGCATTTATTGTAATATTTTTTGTATTTCGCATTGTGGGTCTATGGGCTTTTTCCGTTTCGAAATTGTTCTATAGTGTAAATAACTTGCCGCTTTGTTATATTATTAAAAAGACCCCTATTTATTTTAGGAAAGATAAAAGTGATTGATTGGTGAGAGAGGGAGATTTGAGTTTAAAAAGTAGATTTGAGGGGTTTAAATGAGGAGATAGAGGGAGTTGTTTTATTGGGAATAAAATAAGAAAATGATAAAAGAAAAATAATAATAATTTTTTATTATTTCATTAAATAGCCCTTGGGAAGCATGAAGGGTTATTATTCATCATCTTCCTCAAGCAAACCCTAAAGAAAAAAAACCCTAGCTGCCCTCGACGTCGCTACCCATCTCCGATCGACGATCGTCGCGTAAGCCTACTCATTTTCGTGCAAGTCGTTCGTCCCCCATCGCAAGCGTCGCCGCGCCGTCGTCAAGTCGGTTCGTTTCGCCATTTTCAAACCACCACAAGCATCACCGATCGTTGCCATCACCATCCTCGAGTCGTCCGGTCGCGTCATCTTCATCGTTAA

mRNA sequence

ATGACCAATCTCATTCACCCCTATGGCCCGGCCCCTATACATGTTGATTTTGCAACTGCAATCTATCACGCTGGTGGAAAAAGGGAAATCTACAAACATTTTGGAACTACTAGTTGTCTGATCCATCAGCCAATTATTTTGGTTTCGGTGAGCGTTCTAAATATTCGTGAAGATAGAATGTTTAGAATATGTAGTAATGTTCAAACTGTGGTACCAATAAAGAAGGATAATGATGTTGCTTGGTATTTAGCTTTTGCTAAAGATGCCACTAATAGACATCCATTAGTTGCCCATGTAAGTGTTAATTGTTTGAGAACGTCTTCTTCATCTAGTAACATACGAGAGAATGTTGATATGTCACTGAATATAACGAAGAACAACTTTCAATTTAGAACTACAACATCAAATTTGAGGTCTCTTGAATTTAGATGTTTGCAAGAATGCTGCAAATGGTATGTAAGGGCATCTTGTTATAAGAAGAGCGATATTTGGATGCTACGAAAATACACTTCTAACCATGATTGTTCATTGAGTATTGCCCAAAGTTCTCACATGCAAGCTTTTTCAATATTAATTGCCAATTGTTTGATAGATGATTTTAGATTCATGTCTACTGATCGTTCAATTCCTAAAGAGATTGTGCATAAGGCTCGTACAAATCTTGGAGTTAATATAAGTTACCAGAAAGCTTGGAGGGAAAAAGAACATATGATAAAGATATTATATGGTGACACAGTTGAATCGTATGCATTGATTCTAAGATTCTTTGATAAATTGGTTGAATCTAACCCACTGTTGGTTTTGAGAAGTGGTCTCGGGCATATTCACGTAGACGAAGCCCTTGGGAAGCATGAAGGGTTATTATTCATCATCTTCCTCAAGCAAACCCTAAAGAAAAAAAACCCTAGCTGCCCTCGACGTCGCTACCCATCTCCGATCGACGATCGTCGCGTAAGCCTACTCATTTTCGTGCAAGTCGTTCGTCCCCCATCGCAAGCGTCGCCGCGCCGTCGTCAAGTCGGTTCGTTTCGCCATTTTCAAACCACCACAAGCATCACCGATCGTTGCCATCACCATCCTCGAGTCGTCCGGTCGCGTCATCTTCATCGTTAA

Coding sequence (CDS)

ATGACCAATCTCATTCACCCCTATGGCCCGGCCCCTATACATGTTGATTTTGCAACTGCAATCTATCACGCTGGTGGAAAAAGGGAAATCTACAAACATTTTGGAACTACTAGTTGTCTGATCCATCAGCCAATTATTTTGGTTTCGGTGAGCGTTCTAAATATTCGTGAAGATAGAATGTTTAGAATATGTAGTAATGTTCAAACTGTGGTACCAATAAAGAAGGATAATGATGTTGCTTGGTATTTAGCTTTTGCTAAAGATGCCACTAATAGACATCCATTAGTTGCCCATGTAAGTGTTAATTGTTTGAGAACGTCTTCTTCATCTAGTAACATACGAGAGAATGTTGATATGTCACTGAATATAACGAAGAACAACTTTCAATTTAGAACTACAACATCAAATTTGAGGTCTCTTGAATTTAGATGTTTGCAAGAATGCTGCAAATGGTATGTAAGGGCATCTTGTTATAAGAAGAGCGATATTTGGATGCTACGAAAATACACTTCTAACCATGATTGTTCATTGAGTATTGCCCAAAGTTCTCACATGCAAGCTTTTTCAATATTAATTGCCAATTGTTTGATAGATGATTTTAGATTCATGTCTACTGATCGTTCAATTCCTAAAGAGATTGTGCATAAGGCTCGTACAAATCTTGGAGTTAATATAAGTTACCAGAAAGCTTGGAGGGAAAAAGAACATATGATAAAGATATTATATGGTGACACAGTTGAATCGTATGCATTGATTCTAAGATTCTTTGATAAATTGGTTGAATCTAACCCACTGTTGGTTTTGAGAAGTGGTCTCGGGCATATTCACGTAGACGAAGCCCTTGGGAAGCATGAAGGGTTATTATTCATCATCTTCCTCAAGCAAACCCTAAAGAAAAAAAACCCTAGCTGCCCTCGACGTCGCTACCCATCTCCGATCGACGATCGTCGCGTAAGCCTACTCATTTTCGTGCAAGTCGTTCGTCCCCCATCGCAAGCGTCGCCGCGCCGTCGTCAAGTCGGTTCGTTTCGCCATTTTCAAACCACCACAAGCATCACCGATCGTTGCCATCACCATCCTCGAGTCGTCCGGTCGCGTCATCTTCATCGTTAA

Protein sequence

MTNLIHPYGPAPIHVDFATAIYHAGGKREIYKHFGTTSCLIHQPIILVSVSVLNIREDRMFRICSNVQTVVPIKKDNDVAWYLAFAKDATNRHPLVAHVSVNCLRTSSSSSNIRENVDMSLNITKNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWREKEHMIKILYGDTVESYALILRFFDKLVESNPLLVLRSGLGHIHVDEALGKHEGLLFIIFLKQTLKKKNPSCPRRRYPSPIDDRRVSLLIFVQVVRPPSQASPRRRQVGSFRHFQTTTSITDRCHHHPRVVRSRHLHR
Homology
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BLAST of MELO3C033243.jh1 vs. NCBI nr
Match: TYK02726.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 295 bits (754), Expect = 1.98e-91
Identity = 153/200 (76.50%), Postives = 164/200 (82.00%), Query Frame = 0 

Query: 65  SNVQTVVPIKKDNDVAWYLAFAKDATNRHPLVAHVSVNCLRTSSSSSNIRENVDMSLNIT 124
           SNVQTVVPIKKDNDVAWYLAFAKDAT+RHPLVAHVSVN L TSSSSSN+RENVDMSLNI 
Sbjct: 342 SNVQTVVPIKKDNDVAWYLAFAKDATSRHPLVAHVSVNYLGTSSSSSNVRENVDMSLNID 401

Query: 125 KNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSH 184
                +                   KWYV+AS YKKSD+WMLRKYTS+HDCSLS AQSSH
Sbjct: 402 VYKKGY-------------------KWYVKASHYKKSDLWMLRKYTSDHDCSLSTAQSSH 461

Query: 185 MQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWREKEHMIKILYGD 244
           MQA S +I NCLIDDFRFMSTDR IPKEIVHKARTNLGVNISYQKAWR KE+M+KIL+G+
Sbjct: 462 MQASSTVIGNCLIDDFRFMSTDRFIPKEIVHKARTNLGVNISYQKAWRAKEYMVKILHGN 521

Query: 245 TVESYALILRFFDKLVESNP 264
           TVE YALI RFFDKLVESNP
Sbjct: 522 TVELYALIPRFFDKLVESNP 522

[Close]
BLAST of MELO3C033243.jh1 vs. NCBI nr
Match: KAA0051464.1 (MuDR family transposase [Cucumis melo var. makuwa] >TYK04157.1 MuDR family transposase [Cucumis melo var. makuwa])

HSP 1 Score: 269 bits (688), Expect = 4.30e-85
Identity = 133/161 (82.61%), Postives = 145/161 (90.06%), Query Frame = 0 

Query: 65  SNVQTVVPIKKDNDVAWYLAFAKDATNRHPLVAHVSVNCLRTSSSSSNIRENVDMSLNIT 124
           SNVQ VVPIKK+NDVAWYLAF KDAT+RHPLVAHV V+CL TSSSSS+++ N DMSLNI 
Sbjct: 51  SNVQPVVPIKKNNDVAWYLAFVKDATSRHPLVAHVCVDCLGTSSSSSSVQGNGDMSLNIV 110

Query: 125 KNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSH 184
           KNNFQFRTT SNLRSLEFRCLQE CKWYVRAS YKKSD+WMLRKYTS+HDCSLS AQSSH
Sbjct: 111 KNNFQFRTTVSNLRSLEFRCLQEDCKWYVRASRYKKSDLWMLRKYTSDHDCSLSTAQSSH 170

Query: 185 MQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNI 225
           MQA   +I NCLIDDFRF+ST+RSIPKEIVHK RTNLGVN+
Sbjct: 171 MQASLTVIGNCLIDDFRFISTNRSIPKEIVHKTRTNLGVNL 211

[Close]
BLAST of MELO3C033243.jh1 vs. NCBI nr
Match: TYK18851.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 245 bits (626), Expect = 2.99e-77
Identity = 120/139 (86.33%), Postives = 126/139 (90.65%), Query Frame = 0 

Query: 125 KNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSH 184
           KNNFQFRTT SNLRSLEFRCLQE CKWYVRAS YKKSD+WML+KYTS+HD SLS  QSSH
Sbjct: 2   KNNFQFRTTVSNLRSLEFRCLQEGCKWYVRASRYKKSDLWMLQKYTSDHDSSLSTTQSSH 61

Query: 185 MQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWREKEHMIKILYGD 244
           MQA S +I NCLIDDFRFMSTDR IPKEIVHKARTNLGVNISYQKAWR KEHM+KIL+GD
Sbjct: 62  MQASSTVIGNCLIDDFRFMSTDRFIPKEIVHKARTNLGVNISYQKAWRVKEHMVKILHGD 121

Query: 245 TVESYALILRFFDKLVESN 263
           TVESYALI RFFDKLVE N
Sbjct: 122 TVESYALIPRFFDKLVEYN 140

[Close]
BLAST of MELO3C033243.jh1 vs. NCBI nr
Match: KAA0063987.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 223 bits (567), Expect = 3.55e-62
Identity = 109/126 (86.51%), Postives = 115/126 (91.27%), Query Frame = 0 

Query: 139 SLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSHMQAFSILIANCLID 198
           S EFRCLQE  KWYVRAS YKKSD+WMLRKYTS+ +CSLS AQSSHMQA S +I NCLID
Sbjct: 593 SREFRCLQEGRKWYVRASRYKKSDLWMLRKYTSDDECSLSTAQSSHMQASSTVIGNCLID 652

Query: 199 DFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWREKEHMIKILYGDTVESYALILRFFDK 258
           DFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWR KEHM+KIL+GDTVESYALI RFFDK
Sbjct: 653 DFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWRVKEHMVKILHGDTVESYALIPRFFDK 712

Query: 259 LVESNP 264
           LVESNP
Sbjct: 713 LVESNP 718

[Close]
BLAST of MELO3C033243.jh1 vs. NCBI nr
Match: XP_038896605.1 (uncharacterized protein LOC120084863 [Benincasa hispida])

HSP 1 Score: 217 bits (553), Expect = 1.97e-60
Identity = 116/240 (48.33%), Postives = 155/240 (64.58%), Query Frame = 0 

Query: 65  SNVQTVVPIKKDNDVAWYLAFAKDATNRHPLVAHVSVN------------------CLRT 124
           +N+Q+V  IK+D D++WY   AKD+  RHPLVAHVS +                  CL +
Sbjct: 63  TNIQSVFQIKQDKDISWYWFLAKDSGTRHPLVAHVSHHFVEGSCSGISGRGGDRLLCLGS 122

Query: 125 SSSSSN--IRENVDMSLNITKN--------------------NFQFRTTTSNLRSLEFRC 184
           SS SSN  + +NV  + ++ +                     NFQFRTT SN +S E +C
Sbjct: 123 SSCSSNDQVIQNVGFNGDLKEKDVFGSKEILCKCFDVIAVNKNFQFRTTRSNSKSFELKC 182

Query: 185 LQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMS 244
           LQE C+WYVRAS YKKS++WMLRKY S+H+C ++  QS H QA S +I + L +DFRF+S
Sbjct: 183 LQEGCQWYVRASWYKKSELWMLRKYISDHNCLMNTTQSCHRQASSSVIGDYLKEDFRFIS 242

Query: 245 TDRSIPKEIVHKARTNLGVNISYQKAWREKEHMIKILYGDTVESYALILRFFDKLVESNP 264
           TD S+P++IV+KART LGVNISYQKAWR KEH+++ L GD  +SY+LI +FF +L E NP
Sbjct: 243 TDHSLPRDIVYKARTKLGVNISYQKAWRVKEHILRSLNGDAAKSYSLIPQFFQRLKEMNP 302

[Close]
BLAST of MELO3C033243.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BWW9 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00240 PE=4 SV=1)

HSP 1 Score: 295 bits (754), Expect = 9.59e-92
Identity = 153/200 (76.50%), Postives = 164/200 (82.00%), Query Frame = 0 

Query: 65  SNVQTVVPIKKDNDVAWYLAFAKDATNRHPLVAHVSVNCLRTSSSSSNIRENVDMSLNIT 124
           SNVQTVVPIKKDNDVAWYLAFAKDAT+RHPLVAHVSVN L TSSSSSN+RENVDMSLNI 
Sbjct: 342 SNVQTVVPIKKDNDVAWYLAFAKDATSRHPLVAHVSVNYLGTSSSSSNVRENVDMSLNID 401

Query: 125 KNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSH 184
                +                   KWYV+AS YKKSD+WMLRKYTS+HDCSLS AQSSH
Sbjct: 402 VYKKGY-------------------KWYVKASHYKKSDLWMLRKYTSDHDCSLSTAQSSH 461

Query: 185 MQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWREKEHMIKILYGD 244
           MQA S +I NCLIDDFRFMSTDR IPKEIVHKARTNLGVNISYQKAWR KE+M+KIL+G+
Sbjct: 462 MQASSTVIGNCLIDDFRFMSTDRFIPKEIVHKARTNLGVNISYQKAWRAKEYMVKILHGN 521

Query: 245 TVESYALILRFFDKLVESNP 264
           TVE YALI RFFDKLVESNP
Sbjct: 522 TVELYALIPRFFDKLVESNP 522

[Close]
BLAST of MELO3C033243.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U815 (MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold148G00280 PE=4 SV=1)

HSP 1 Score: 269 bits (688), Expect = 2.08e-85
Identity = 133/161 (82.61%), Postives = 145/161 (90.06%), Query Frame = 0 

Query: 65  SNVQTVVPIKKDNDVAWYLAFAKDATNRHPLVAHVSVNCLRTSSSSSNIRENVDMSLNIT 124
           SNVQ VVPIKK+NDVAWYLAF KDAT+RHPLVAHV V+CL TSSSSS+++ N DMSLNI 
Sbjct: 51  SNVQPVVPIKKNNDVAWYLAFVKDATSRHPLVAHVCVDCLGTSSSSSSVQGNGDMSLNIV 110

Query: 125 KNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSH 184
           KNNFQFRTT SNLRSLEFRCLQE CKWYVRAS YKKSD+WMLRKYTS+HDCSLS AQSSH
Sbjct: 111 KNNFQFRTTVSNLRSLEFRCLQEDCKWYVRASRYKKSDLWMLRKYTSDHDCSLSTAQSSH 170

Query: 185 MQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNI 225
           MQA   +I NCLIDDFRF+ST+RSIPKEIVHK RTNLGVN+
Sbjct: 171 MQASLTVIGNCLIDDFRFISTNRSIPKEIVHKTRTNLGVNL 211

[Close]
BLAST of MELO3C033243.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D5M1 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00490 PE=4 SV=1)

HSP 1 Score: 245 bits (626), Expect = 1.45e-77
Identity = 120/139 (86.33%), Postives = 126/139 (90.65%), Query Frame = 0 

Query: 125 KNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSH 184
           KNNFQFRTT SNLRSLEFRCLQE CKWYVRAS YKKSD+WML+KYTS+HD SLS  QSSH
Sbjct: 2   KNNFQFRTTVSNLRSLEFRCLQEGCKWYVRASRYKKSDLWMLQKYTSDHDSSLSTTQSSH 61

Query: 185 MQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWREKEHMIKILYGD 244
           MQA S +I NCLIDDFRFMSTDR IPKEIVHKARTNLGVNISYQKAWR KEHM+KIL+GD
Sbjct: 62  MQASSTVIGNCLIDDFRFMSTDRFIPKEIVHKARTNLGVNISYQKAWRVKEHMVKILHGD 121

Query: 245 TVESYALILRFFDKLVESN 263
           TVESYALI RFFDKLVE N
Sbjct: 122 TVESYALIPRFFDKLVEYN 140

[Close]
BLAST of MELO3C033243.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VAF9 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G001540 PE=4 SV=1)

HSP 1 Score: 223 bits (567), Expect = 1.72e-62
Identity = 109/126 (86.51%), Postives = 115/126 (91.27%), Query Frame = 0 

Query: 139 SLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSHMQAFSILIANCLID 198
           S EFRCLQE  KWYVRAS YKKSD+WMLRKYTS+ +CSLS AQSSHMQA S +I NCLID
Sbjct: 593 SREFRCLQEGRKWYVRASRYKKSDLWMLRKYTSDDECSLSTAQSSHMQASSTVIGNCLID 652

Query: 199 DFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWREKEHMIKILYGDTVESYALILRFFDK 258
           DFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWR KEHM+KIL+GDTVESYALI RFFDK
Sbjct: 653 DFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWRVKEHMVKILHGDTVESYALIPRFFDK 712

Query: 259 LVESNP 264
           LVESNP
Sbjct: 713 LVESNP 718

[Close]
BLAST of MELO3C033243.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U8E2 (MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1796G00090 PE=4 SV=1)

HSP 1 Score: 201 bits (510), Expect = 1.00e-60
Identity = 101/116 (87.07%), Postives = 105/116 (90.52%), Query Frame = 0 

Query: 107 SSSSSNIRENVDMSLNITKNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIWML 166
           SSSSS++RENVDMSL I KNNFQ RTT SNLRSLEFRCLQE CKWYVRAS YKKSD+WML
Sbjct: 2   SSSSSSVRENVDMSLTIVKNNFQSRTTVSNLRSLEFRCLQEDCKWYVRASRYKKSDLWML 61

Query: 167 RKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLG 222
           RKYTSNHDCSLS AQSSHMQA S +I NCLIDD RFMSTDRSIPKEIVHKARTNLG
Sbjct: 62  RKYTSNHDCSLSTAQSSHMQASSTVIDNCLIDDSRFMSTDRSIPKEIVHKARTNLG 117

The following BLAST results are available for this feature:
BLAST of MELO3C033243.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK02726.11.98e-9176.50retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0051464.14.30e-8582.61MuDR family transposase [Cucumis melo var. makuwa] >TYK04157.1 MuDR family trans... [more]
TYK18851.12.99e-7786.33MuDRA-like transposase [Cucumis melo var. makuwa][more]
KAA0063987.13.55e-6286.51gag protease polyprotein [Cucumis melo var. makuwa][more]
XP_038896605.11.97e-6048.33uncharacterized protein LOC120084863 [Benincasa hispida][more]
BLAST of MELO3C033243.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033243.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BWW99.59e-9276.50Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5A7U8152.08e-8582.61MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D5M11.45e-7786.33MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... [more]
A0A5A7VAF91.72e-6286.51Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
A0A5A7U8E21.00e-6087.07MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C033243.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033243.jh1.t1MELO3C033243.jh1.t1mRNA