MELO3C033237 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033237
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Reverse transcriptase Ty1/copia-type domain-containing protein
Location	chr08: 12716973 .. 12718370 (+)
RNA-Seq Expression	MELO3C033237
Synteny	MELO3C033237

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGATGAGTTTAATAATCCAAGTAGCCCTAATTATCAGATGGTTCATATTAAAGGGTTCAAATTTGTGATTTCTCCTCCTGTGATTAATGGTTTTCTTGGGAATATTGTTGATATTGACTGCTCTCCATCGTGTCCTTCTACTGAGGTTCTAGCTACTGTCTTATCTGGTGGGACCTTGTCGTCATCACCTGTAAATGGGATTCCTGCAACTGCTCTCAGCATCAAATATGCCATCCTGCACAAGATTGGCATTGCTAATTGGTTCCGTTCCTCTCATGCCTCCAGTGTATCTGCTGCTTTAGGTACATTTTTGTATCAAATTTGCAATGATAATAAAGTAGATACGGGTGCATTCATTTACATTCAGCTGTTGAGGCATGTTGGTTCTTTTGGGGTTAAGGTTCCAATTGCTCTTCCGTGGTTTTTCTCCGGTCTGTTACTTCACTTAAATGGAGTTGTGGTTACTGTAACTGATGCTCTTGGATCTGAACCTAAAACAATTGTCCTTAGCTACAGACTCTTTCAAGGCAGTCATGTGCCCGATATTGACCATGATGTGCATCCGACTCGTGGCCCACGTATTTTTGACACTACTGACTGGGATGAGTCTGCTGAAGGTTTCTATGTGGATCGTGAGTTAGCTGCCCGCATTGTTAATTCTTTGACTGCTGAATCTCGAGCACTGACTAACTCCATCAATCTGTTGTCTAAACGTCAATTGGAGATTGATGCTCTCATTCGACGTTTGAAGTCATTGGCACCATCTACTATTCGTCAGCAGCCATCTTCCGGTTGATGTCATTACTTTTTCGGTTCAAAGGAGGAGTGGATGTAATGTTGTTGGATGTTTTGTTGGTTTTGGGCAAAAATGGATAATGTTGTTCTGGTTCTATTCTTTTTTATGACTGTAGGTTTTGTTTTGTGTCAGATGTAGTTTGATAAAATCTTTTGTCTTATGAATCAAATGTCCTCCGTTTCACTAAGGACTGAAGGTTGCGGTTTATAACATACAATTGGTTGGATGTTGACTGTCCTGACTTGGTATCATCTGTTTGTCTTAACAGTTGACTCTGTGGTACTGTTCTGTTGAACCAGAAAAGAAATTCCTTTTAGACAAAAGGGGGAGTTTGTTGAAATGTTCTTTGTCTAAAAGAATATCTCTTAATTAAATGATTTATTTATATTTAAAAGAGAAGATATTCAATGAATATTTGATTCTCCTATATTTTGGGAATCTCTCTAATTAATATTTAAGAATATAATAAGTTCCTATTCTTTAGGGATCTTATTAAAGATACAAGTTTTATACATATCTTGATATATATGTATATATATGAGTTTTGAAGACTGGCTGGCTTACGCAGAACAGGAGAGAAAAAAGTTACGTTGCTAA

mRNA sequence

ATGCCTGATGAGTTTAATAATCCAAGTAGCCCTAATTATCAGATGGTTCATATTAAAGGGTTCAAATTTGTGATTTCTCCTCCTGTGATTAATGGTTTTCTTGGGAATATTGTTGATATTGACTGCTCTCCATCGTGTCCTTCTACTGAGGTTCTAGCTACTGTCTTATCTGGTGGGACCTTGTCGTCATCACCTGTAAATGGGATTCCTGCAACTGCTCTCAGCATCAAATATGCCATCCTGCACAAGATTGGCATTGCTAATTGGTTCCGTTCCTCTCATGCCTCCAGTGTATCTGCTGCTTTAGGTACATTTTTGTATCAAATTTGCAATGATAATAAAGTAGATACGGGTGCATTCATTTACATTCAGCTGTTGAGGCATGTTGGTTCTTTTGGGGTTAAGGTTCCAATTGCTCTTCCGTGGTTTTTCTCCGGTCTGTTACTTCACTTAAATGGAGTTGTGGTTACTGTAACTGATGCTCTTGGATCTGAACCTAAAACAATTGTCCTTAGCTACAGACTCTTTCAAGGCAGTCATGTGCCCGATATTGACCATGATGTGCATCCGACTCGTGGCCCACGTATTTTTGACACTACTGACTGGGATGAGTCTGCTGAAGGTTTCTATGTGGATCGTGAGTTAGCTGCCCGCATTGTTAATTCTTTGACTGCTGAATCTCGAGCACTGACTAACTCCATCAATCTGTTGTCTAAACGTCAATTGGAGATTGATGCTCTCATTCGACGTTTGAAGTCATTGGCACCATCTACTATTCGTCAGCAGCCATCTTCCGACTGGCTGGCTTACGCAGAACAGGAGAGAAAAAAGTTACGTTGCTAA

Coding sequence (CDS)

ATGCCTGATGAGTTTAATAATCCAAGTAGCCCTAATTATCAGATGGTTCATATTAAAGGGTTCAAATTTGTGATTTCTCCTCCTGTGATTAATGGTTTTCTTGGGAATATTGTTGATATTGACTGCTCTCCATCGTGTCCTTCTACTGAGGTTCTAGCTACTGTCTTATCTGGTGGGACCTTGTCGTCATCACCTGTAAATGGGATTCCTGCAACTGCTCTCAGCATCAAATATGCCATCCTGCACAAGATTGGCATTGCTAATTGGTTCCGTTCCTCTCATGCCTCCAGTGTATCTGCTGCTTTAGGTACATTTTTGTATCAAATTTGCAATGATAATAAAGTAGATACGGGTGCATTCATTTACATTCAGCTGTTGAGGCATGTTGGTTCTTTTGGGGTTAAGGTTCCAATTGCTCTTCCGTGGTTTTTCTCCGGTCTGTTACTTCACTTAAATGGAGTTGTGGTTACTGTAACTGATGCTCTTGGATCTGAACCTAAAACAATTGTCCTTAGCTACAGACTCTTTCAAGGCAGTCATGTGCCCGATATTGACCATGATGTGCATCCGACTCGTGGCCCACGTATTTTTGACACTACTGACTGGGATGAGTCTGCTGAAGGTTTCTATGTGGATCGTGAGTTAGCTGCCCGCATTGTTAATTCTTTGACTGCTGAATCTCGAGCACTGACTAACTCCATCAATCTGTTGTCTAAACGTCAATTGGAGATTGATGCTCTCATTCGACGTTTGAAGTCATTGGCACCATCTACTATTCGTCAGCAGCCATCTTCCGACTGGCTGGCTTACGCAGAACAGGAGAGAAAAAAGTTACGTTGCTAA

Protein sequence

MPDEFNNPSSPNYQMVHIKGFKFVISPPVINGFLGNIVDIDCSPSCPSTEVLATVLSGGTLSSSPVNGIPATALSIKYAILHKIGIANWFRSSHASSVSAALGTFLYQICNDNKVDTGAFIYIQLLRHVGSFGVKVPIALPWFFSGLLLHLNGVVVTVTDALGSEPKTIVLSYRLFQGSHVPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTNSINLLSKRQLEIDALIRRLKSLAPSTIRQQPSSDWLAYAEQERKKLRC

Homology

[Close]

BLAST of MELO3C033237 vs. NCBI nr
Match: KAA0025854.1 (uncharacterized protein E6C27_scaffold34G001280 [Cucumis melo var. makuwa] >TYK22609.1 uncharacterized protein E5676_scaffold195G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 527.7 bits (1358), Expect = 6.1e-146
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MPDEFNNPSSPNYQMVHIKGFKFVISPPVINGFLGNIVDIDCSPSCPSTEVLATVLSGGT 60
           MPDEFNNPSSPNYQMVHIKGFKFVISPPVINGFLGNIVDIDCSPSCPSTEVLATVLSGGT
Sbjct: 1   MPDEFNNPSSPNYQMVHIKGFKFVISPPVINGFLGNIVDIDCSPSCPSTEVLATVLSGGT 60

Query: 61  LSSSPVNGIPATALSIKYAILHKIGIANWFRSSHASSVSAALGTFLYQICNDNKVDTGAF 120
           LSSSPVNGIPATALSIKYAILHKIGIANWFRSSHASSVSAALGTFLYQICNDNKVDTGAF
Sbjct: 61  LSSSPVNGIPATALSIKYAILHKIGIANWFRSSHASSVSAALGTFLYQICNDNKVDTGAF 120

Query: 121 IYIQLLRHVGSFGVKVPIALPWFFSGLLLHLNGVVVTVTDALGSEPKTIVLSYRLFQGSH 180
           IYIQLLRHVGSFGVKVPIALPWFFSGLLLHLNGVVVTVTDALGSEPKTIVLSYRLFQGSH
Sbjct: 121 IYIQLLRHVGSFGVKVPIALPWFFSGLLLHLNGVVVTVTDALGSEPKTIVLSYRLFQGSH 180

Query: 181 VPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTNSINLLSKR 240
           VPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTNSINLLSKR
Sbjct: 181 VPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTNSINLLSKR 240

Query: 241 QLEIDALIRRLKSLAPSTIRQQPSS 266
           QLEIDALIRRLKSLAPSTIRQQPSS
Sbjct: 241 QLEIDALIRRLKSLAPSTIRQQPSS 265

[Close]

BLAST of MELO3C033237 vs. NCBI nr
Match: TYK27876.1 (uncharacterized protein E5676_scaffold384G00590 [Cucumis melo var. makuwa])

HSP 1 Score: 451.8 bits (1161), Expect = 4.2e-123
Identity = 230/265 (86.79%), Postives = 243/265 (91.70%), Query Frame = 0


Query: 1   MPDEFNNPSSPNYQMVHIKGFKFVISPPVINGFLGNIVDIDCSPSCPSTEVLATVLSGGT 60
           +PDEF+NPSSP+YQ VHI+ FKFVISP VINGFLGNIVDIDCSPSCP TE+LATVLSGGT
Sbjct: 493 LPDEFSNPSSPDYQTVHIRWFKFVISPTVINGFLGNIVDIDCSPSCP-TEILATVLSGGT 552

Query: 61  LSSSPVNGIPATALSIKYAILHKIGIANWFRSSHASSVSAALGTFLYQICNDNKVDTGAF 120
           LS+ PVNGIPA ALSIKYA LHKIGIANWF SSHASS+SAALGTFLYQICND+KVDTGAF
Sbjct: 553 LSTWPVNGIPAAALSIKYATLHKIGIANWFPSSHASSISAALGTFLYQICNDDKVDTGAF 612

Query: 121 IYIQLLRHVGSFGVKVPIALPWFFSGLLLHLNGVVVTVTDALGSEPKTIVLSYRLFQGSH 180
           +Y QLLRHVGSFGVKVPIALP FFS LLLHLNG V+T TDA G EPK IVLSYRLFQGSH
Sbjct: 613 VYNQLLRHVGSFGVKVPIALPRFFSSLLLHLNGAVLTATDAPGPEPKIIVLSYRLFQGSH 672

Query: 181 VPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTNSINLLSKR 240
           V DIDHDVH TRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRAL NSINLLS+R
Sbjct: 673 VSDIDHDVHLTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALINSINLLSER 732

Query: 241 QLEIDALIRRLKSLAPSTIRQQPSS 266
           +LE+DALI  LKSLAPST RQQPSS
Sbjct: 733 RLEVDALICHLKSLAPSTSRQQPSS 756

[Close]

BLAST of MELO3C033237 vs. NCBI nr
Match: KAA0066728.1 (uncharacterized protein E6C27_scaffold271G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 451.8 bits (1161), Expect = 4.2e-123
Identity = 230/265 (86.79%), Postives = 243/265 (91.70%), Query Frame = 0


Query: 1   MPDEFNNPSSPNYQMVHIKGFKFVISPPVINGFLGNIVDIDCSPSCPSTEVLATVLSGGT 60
           +PDEF+NPSSP+YQ VHI+ FKFVISP VINGFLGNIVDIDCSPSCP TE+LATVLSGGT
Sbjct: 516 LPDEFSNPSSPDYQTVHIRWFKFVISPTVINGFLGNIVDIDCSPSCP-TEILATVLSGGT 575

Query: 61  LSSSPVNGIPATALSIKYAILHKIGIANWFRSSHASSVSAALGTFLYQICNDNKVDTGAF 120
           LS+ PVNGIPA ALSIKYA LHKIGIANWF SSHASS+SAALGTFLYQICND+KVDTGAF
Sbjct: 576 LSTWPVNGIPAAALSIKYATLHKIGIANWFPSSHASSISAALGTFLYQICNDDKVDTGAF 635

Query: 121 IYIQLLRHVGSFGVKVPIALPWFFSGLLLHLNGVVVTVTDALGSEPKTIVLSYRLFQGSH 180
           +Y QLLRHVGSFGVKVPIALP FFS LLLHLNG V+T TDA G EPK IVLSYRLFQGSH
Sbjct: 636 VYNQLLRHVGSFGVKVPIALPRFFSSLLLHLNGAVLTATDAPGPEPKIIVLSYRLFQGSH 695

Query: 181 VPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTNSINLLSKR 240
           V DIDHDVH TRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRAL NSINLLS+R
Sbjct: 696 VSDIDHDVHLTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALINSINLLSER 755

Query: 241 QLEIDALIRRLKSLAPSTIRQQPSS 266
           +LE+DALI  LKSLAPST RQQPSS
Sbjct: 756 RLEVDALICHLKSLAPSTSRQQPSS 779

[Close]

BLAST of MELO3C033237 vs. NCBI nr
Match: XP_016903074.1 (PREDICTED: uncharacterized protein LOC107992031 [Cucumis melo])

HSP 1 Score: 451.8 bits (1161), Expect = 4.2e-123
Identity = 230/265 (86.79%), Postives = 243/265 (91.70%), Query Frame = 0


Query: 1   MPDEFNNPSSPNYQMVHIKGFKFVISPPVINGFLGNIVDIDCSPSCPSTEVLATVLSGGT 60
           +PDEF+NPSSP+YQ VHI+ FKFVISP VINGFLGNIVDIDCSPSCP TE+LATVLSGGT
Sbjct: 18  LPDEFSNPSSPDYQTVHIRWFKFVISPTVINGFLGNIVDIDCSPSCP-TEILATVLSGGT 77

Query: 61  LSSSPVNGIPATALSIKYAILHKIGIANWFRSSHASSVSAALGTFLYQICNDNKVDTGAF 120
           LS+ PVNGIPA ALSIKYA LHKIGIANWF SSHASS+SAALGTFLYQICND+KVDTGAF
Sbjct: 78  LSTWPVNGIPAAALSIKYATLHKIGIANWFPSSHASSISAALGTFLYQICNDDKVDTGAF 137

Query: 121 IYIQLLRHVGSFGVKVPIALPWFFSGLLLHLNGVVVTVTDALGSEPKTIVLSYRLFQGSH 180
           +Y QLLRHVGSFGVKVPIALP FFS LLLHLNG V+T TDA G EPK IVLSYRLFQGSH
Sbjct: 138 VYNQLLRHVGSFGVKVPIALPRFFSSLLLHLNGAVLTATDAPGPEPKIIVLSYRLFQGSH 197

Query: 181 VPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTNSINLLSKR 240
           V DIDHDVH TRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRAL NSINLLS+R
Sbjct: 198 VSDIDHDVHLTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALINSINLLSER 257

Query: 241 QLEIDALIRRLKSLAPSTIRQQPSS 266
           +LE+DALI  LKSLAPST RQQPSS
Sbjct: 258 RLEVDALICHLKSLAPSTSRQQPSS 281

[Close]

BLAST of MELO3C033237 vs. NCBI nr
Match: KAA0065370.1 (uncharacterized protein E6C27_scaffold17G00320 [Cucumis melo var. makuwa] >TYK20867.1 uncharacterized protein E5676_scaffold682G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 448.7 bits (1153), Expect = 3.6e-122
Identity = 227/265 (85.66%), Postives = 239/265 (90.19%), Query Frame = 0


Query: 1   MPDEFNNPSSPNYQMVHIKGFKFVISPPVINGFLGNIVDIDCSPSCPSTEVLATVLSGGT 60
           MPDEFNNPSSP+YQ VHI+GFKFVISP V N FLGNIVDIDCS SCP TEVLATVLSGGT
Sbjct: 374 MPDEFNNPSSPDYQTVHIRGFKFVISPIVFNDFLGNIVDIDCSSSCPPTEVLATVLSGGT 433

Query: 61  LSSSPVNGIPATALSIKYAILHKIGIANWFRSSHASSVSAALGTFLYQICNDNKVDTGAF 120
           LS+ PVNGIP  ALSIKYAILHKIGIANWF SSHASS+SAALGTFLYQICND+KVDTGAF
Sbjct: 434 LSTWPVNGIPTAALSIKYAILHKIGIANWFPSSHASSISAALGTFLYQICNDDKVDTGAF 493

Query: 121 IYIQLLRHVGSFGVKVPIALPWFFSGLLLHLNGVVVTVTDALGSEPKTIVLSYRLFQGSH 180
           IY QLLRHVG FGVKVPIAL  FFS LLLHLNG V+T TDA G +PKTI LSYRLFQGSH
Sbjct: 494 IYNQLLRHVGFFGVKVPIALLRFFSSLLLHLNGAVLTATDAPGPKPKTIALSYRLFQGSH 553

Query: 181 VPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTNSINLLSKR 240
           VP+IDH VHPTRGPRIFDTTDWDE  EGFYV+RELAARIVNSLT ESRALTNSINLLS+R
Sbjct: 554 VPNIDHSVHPTRGPRIFDTTDWDEFIEGFYVNRELAARIVNSLTVESRALTNSINLLSER 613

Query: 241 QLEIDALIRRLKSLAPSTIRQQPSS 266
           +LE+DALIR LKSLAPST RQQPSS
Sbjct: 614 RLEVDALIRHLKSLAPSTSRQQPSS 638

[Close]

BLAST of MELO3C033237 vs. ExPASy TrEMBL
Match: A0A5A7SJJ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00330 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 2.9e-146
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MPDEFNNPSSPNYQMVHIKGFKFVISPPVINGFLGNIVDIDCSPSCPSTEVLATVLSGGT 60
           MPDEFNNPSSPNYQMVHIKGFKFVISPPVINGFLGNIVDIDCSPSCPSTEVLATVLSGGT
Sbjct: 1   MPDEFNNPSSPNYQMVHIKGFKFVISPPVINGFLGNIVDIDCSPSCPSTEVLATVLSGGT 60

Query: 61  LSSSPVNGIPATALSIKYAILHKIGIANWFRSSHASSVSAALGTFLYQICNDNKVDTGAF 120
           LSSSPVNGIPATALSIKYAILHKIGIANWFRSSHASSVSAALGTFLYQICNDNKVDTGAF
Sbjct: 61  LSSSPVNGIPATALSIKYAILHKIGIANWFRSSHASSVSAALGTFLYQICNDNKVDTGAF 120

Query: 121 IYIQLLRHVGSFGVKVPIALPWFFSGLLLHLNGVVVTVTDALGSEPKTIVLSYRLFQGSH 180
           IYIQLLRHVGSFGVKVPIALPWFFSGLLLHLNGVVVTVTDALGSEPKTIVLSYRLFQGSH
Sbjct: 121 IYIQLLRHVGSFGVKVPIALPWFFSGLLLHLNGVVVTVTDALGSEPKTIVLSYRLFQGSH 180

Query: 181 VPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTNSINLLSKR 240
           VPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTNSINLLSKR
Sbjct: 181 VPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTNSINLLSKR 240

Query: 241 QLEIDALIRRLKSLAPSTIRQQPSS 266
           QLEIDALIRRLKSLAPSTIRQQPSS
Sbjct: 241 QLEIDALIRRLKSLAPSTIRQQPSS 265

[Close]

BLAST of MELO3C033237 vs. ExPASy TrEMBL
Match: A0A5D3DVV8 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00590 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 2.0e-123
Identity = 230/265 (86.79%), Postives = 243/265 (91.70%), Query Frame = 0


Query: 1   MPDEFNNPSSPNYQMVHIKGFKFVISPPVINGFLGNIVDIDCSPSCPSTEVLATVLSGGT 60
           +PDEF+NPSSP+YQ VHI+ FKFVISP VINGFLGNIVDIDCSPSCP TE+LATVLSGGT
Sbjct: 493 LPDEFSNPSSPDYQTVHIRWFKFVISPTVINGFLGNIVDIDCSPSCP-TEILATVLSGGT 552

Query: 61  LSSSPVNGIPATALSIKYAILHKIGIANWFRSSHASSVSAALGTFLYQICNDNKVDTGAF 120
           LS+ PVNGIPA ALSIKYA LHKIGIANWF SSHASS+SAALGTFLYQICND+KVDTGAF
Sbjct: 553 LSTWPVNGIPAAALSIKYATLHKIGIANWFPSSHASSISAALGTFLYQICNDDKVDTGAF 612

Query: 121 IYIQLLRHVGSFGVKVPIALPWFFSGLLLHLNGVVVTVTDALGSEPKTIVLSYRLFQGSH 180
           +Y QLLRHVGSFGVKVPIALP FFS LLLHLNG V+T TDA G EPK IVLSYRLFQGSH
Sbjct: 613 VYNQLLRHVGSFGVKVPIALPRFFSSLLLHLNGAVLTATDAPGPEPKIIVLSYRLFQGSH 672

Query: 181 VPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTNSINLLSKR 240
           V DIDHDVH TRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRAL NSINLLS+R
Sbjct: 673 VSDIDHDVHLTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALINSINLLSER 732

Query: 241 QLEIDALIRRLKSLAPSTIRQQPSS 266
           +LE+DALI  LKSLAPST RQQPSS
Sbjct: 733 RLEVDALICHLKSLAPSTSRQQPSS 756

[Close]

BLAST of MELO3C033237 vs. ExPASy TrEMBL
Match: A0A5A7VG44 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G00650 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 2.0e-123
Identity = 230/265 (86.79%), Postives = 243/265 (91.70%), Query Frame = 0


Query: 1   MPDEFNNPSSPNYQMVHIKGFKFVISPPVINGFLGNIVDIDCSPSCPSTEVLATVLSGGT 60
           +PDEF+NPSSP+YQ VHI+ FKFVISP VINGFLGNIVDIDCSPSCP TE+LATVLSGGT
Sbjct: 516 LPDEFSNPSSPDYQTVHIRWFKFVISPTVINGFLGNIVDIDCSPSCP-TEILATVLSGGT 575

Query: 61  LSSSPVNGIPATALSIKYAILHKIGIANWFRSSHASSVSAALGTFLYQICNDNKVDTGAF 120
           LS+ PVNGIPA ALSIKYA LHKIGIANWF SSHASS+SAALGTFLYQICND+KVDTGAF
Sbjct: 576 LSTWPVNGIPAAALSIKYATLHKIGIANWFPSSHASSISAALGTFLYQICNDDKVDTGAF 635

Query: 121 IYIQLLRHVGSFGVKVPIALPWFFSGLLLHLNGVVVTVTDALGSEPKTIVLSYRLFQGSH 180
           +Y QLLRHVGSFGVKVPIALP FFS LLLHLNG V+T TDA G EPK IVLSYRLFQGSH
Sbjct: 636 VYNQLLRHVGSFGVKVPIALPRFFSSLLLHLNGAVLTATDAPGPEPKIIVLSYRLFQGSH 695

Query: 181 VPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTNSINLLSKR 240
           V DIDHDVH TRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRAL NSINLLS+R
Sbjct: 696 VSDIDHDVHLTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALINSINLLSER 755

Query: 241 QLEIDALIRRLKSLAPSTIRQQPSS 266
           +LE+DALI  LKSLAPST RQQPSS
Sbjct: 756 RLEVDALICHLKSLAPSTSRQQPSS 779

[Close]

BLAST of MELO3C033237 vs. ExPASy TrEMBL
Match: A0A1S4E4C3 (uncharacterized protein LOC107992031 OS=Cucumis melo OX=3656 GN=LOC107992031 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 2.0e-123
Identity = 230/265 (86.79%), Postives = 243/265 (91.70%), Query Frame = 0


Query: 1   MPDEFNNPSSPNYQMVHIKGFKFVISPPVINGFLGNIVDIDCSPSCPSTEVLATVLSGGT 60
           +PDEF+NPSSP+YQ VHI+ FKFVISP VINGFLGNIVDIDCSPSCP TE+LATVLSGGT
Sbjct: 18  LPDEFSNPSSPDYQTVHIRWFKFVISPTVINGFLGNIVDIDCSPSCP-TEILATVLSGGT 77

Query: 61  LSSSPVNGIPATALSIKYAILHKIGIANWFRSSHASSVSAALGTFLYQICNDNKVDTGAF 120
           LS+ PVNGIPA ALSIKYA LHKIGIANWF SSHASS+SAALGTFLYQICND+KVDTGAF
Sbjct: 78  LSTWPVNGIPAAALSIKYATLHKIGIANWFPSSHASSISAALGTFLYQICNDDKVDTGAF 137

Query: 121 IYIQLLRHVGSFGVKVPIALPWFFSGLLLHLNGVVVTVTDALGSEPKTIVLSYRLFQGSH 180
           +Y QLLRHVGSFGVKVPIALP FFS LLLHLNG V+T TDA G EPK IVLSYRLFQGSH
Sbjct: 138 VYNQLLRHVGSFGVKVPIALPRFFSSLLLHLNGAVLTATDAPGPEPKIIVLSYRLFQGSH 197

Query: 181 VPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTNSINLLSKR 240
           V DIDHDVH TRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRAL NSINLLS+R
Sbjct: 198 VSDIDHDVHLTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALINSINLLSER 257

Query: 241 QLEIDALIRRLKSLAPSTIRQQPSS 266
           +LE+DALI  LKSLAPST RQQPSS
Sbjct: 258 RLEVDALICHLKSLAPSTSRQQPSS 281

[Close]

BLAST of MELO3C033237 vs. ExPASy TrEMBL
Match: A0A5D3DB71 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold682G00320 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.7e-122
Identity = 227/265 (85.66%), Postives = 239/265 (90.19%), Query Frame = 0


Query: 1   MPDEFNNPSSPNYQMVHIKGFKFVISPPVINGFLGNIVDIDCSPSCPSTEVLATVLSGGT 60
           MPDEFNNPSSP+YQ VHI+GFKFVISP V N FLGNIVDIDCS SCP TEVLATVLSGGT
Sbjct: 374 MPDEFNNPSSPDYQTVHIRGFKFVISPIVFNDFLGNIVDIDCSSSCPPTEVLATVLSGGT 433

Query: 61  LSSSPVNGIPATALSIKYAILHKIGIANWFRSSHASSVSAALGTFLYQICNDNKVDTGAF 120
           LS+ PVNGIP  ALSIKYAILHKIGIANWF SSHASS+SAALGTFLYQICND+KVDTGAF
Sbjct: 434 LSTWPVNGIPTAALSIKYAILHKIGIANWFPSSHASSISAALGTFLYQICNDDKVDTGAF 493

Query: 121 IYIQLLRHVGSFGVKVPIALPWFFSGLLLHLNGVVVTVTDALGSEPKTIVLSYRLFQGSH 180
           IY QLLRHVG FGVKVPIAL  FFS LLLHLNG V+T TDA G +PKTI LSYRLFQGSH
Sbjct: 494 IYNQLLRHVGFFGVKVPIALLRFFSSLLLHLNGAVLTATDAPGPKPKTIALSYRLFQGSH 553

Query: 181 VPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTNSINLLSKR 240
           VP+IDH VHPTRGPRIFDTTDWDE  EGFYV+RELAARIVNSLT ESRALTNSINLLS+R
Sbjct: 554 VPNIDHSVHPTRGPRIFDTTDWDEFIEGFYVNRELAARIVNSLTVESRALTNSINLLSER 613

Query: 241 QLEIDALIRRLKSLAPSTIRQQPSS 266
           +LE+DALIR LKSLAPST RQQPSS
Sbjct: 614 RLEVDALIRHLKSLAPSTSRQQPSS 638

The following BLAST results are available for this feature:

BLAST of MELO3C033237 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025854.1	6.1e-146	100.00	uncharacterized protein E6C27_scaffold34G001280 [Cucumis melo var. makuwa] >TYK2...	[more]
TYK27876.1	4.2e-123	86.79	uncharacterized protein E5676_scaffold384G00590 [Cucumis melo var. makuwa]	[more]
KAA0066728.1	4.2e-123	86.79	uncharacterized protein E6C27_scaffold271G00650 [Cucumis melo var. makuwa]	[more]
XP_016903074.1	4.2e-123	86.79	PREDICTED: uncharacterized protein LOC107992031 [Cucumis melo]	[more]
KAA0065370.1	3.6e-122	85.66	uncharacterized protein E6C27_scaffold17G00320 [Cucumis melo var. makuwa] >TYK20...	[more]

BLAST of MELO3C033237 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C033237 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SJJ1	2.9e-146	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DVV8	2.0e-123	86.79	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo v...	[more]
A0A5A7VG44	2.0e-123	86.79	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo v...	[more]
A0A1S4E4C3	2.0e-123	86.79	uncharacterized protein LOC107992031 OS=Cucumis melo OX=3656 GN=LOC107992031 PE=...	[more]
A0A5D3DB71	1.7e-122	85.66	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo v...	[more]

BLAST of MELO3C033237 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033237.1	MELO3C033237.1	mRNA