MELO3C033234 (gene) Melon (DHL92) v4

Overview
NameMELO3C033234
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionGlobal transcription factor
Locationchr08: 12663083 .. 12667385 (+)
RNA-Seq ExpressionMELO3C033234
SyntenyMELO3C033234
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTGTGCGTTGGGAAAACTTCTTATTCCCGACATCTTACTTTATGCATCGAGAAGAGATTTTTCTCTCGACGTCTTACTTTATGCGTCAAGAGAACCTCTTATTCCTGACGTCTTTTATGCCGATGTCTTTTTTGGAATCGGAAAAAGCCCGATTTCTTGTAGTGGGAATCTGTGAGGGCCTCACCCAAATTAACAGTTGATTCTCTTATAGAGGTTATTTTCGAAGTAGCAATGCCCTCTTCTCAAGTTTGGTGATGTTACAACGTCATGTTTATCTCTTGAAAAATGTTTATGGATTAATATTGTGAAGATTGGTAGAATTCTACAATTTTCTTTCAATGACTTTGTTGTTTTTATTCTTTTTTATGATACTGAAACTCTAGGTGTGTGTGCATTTAGGTTTTATGCTATTGAATGTAGAATAGGAGCATACTATGTTGTGAATTTTGATTTCCCTTTTCCTTCACTACTCTTCAGCCATAGGTTAAAGGCTTCCTCATGGTTTAATGGTTATTCATTTTCAATATGCTTCTGCATGATTTAGTTTATCTTGTATTTTACTATCAAGGACTTACAAATGTACCTCTTTAGCGACAAGCTACAAATAATGCCAAATCGAACCCAAGTCTGAAGAATCCAGTGGTTGCTCGACAAAGACCAAGGCGAGGTGGTGGTAGCTCATGGGAGGGCCTGCACGAGGTGACTGCATTAGTAAGTTTTCCCAGGGTGTTAAACCTCACGTGAATCCTATGGCTCATTCAGGTGGTTGTTATTTTCTAAATATAGTTTTAAGTTTCTAAATATAAGACCAAGTTTTTCCCTTTTGTCTTAAATGTCTACCTAGATCTCACAAGGTTGTCCTAGGATTTCCTTTCCAAGGCACTTACTTTGGCTACCCACATAACCCTTGGTCGCTTACCTATGTAAAAAATGCCTAATAACCTCTTAACGCCAAATACACAAGTCTTTGACACAACCAAAATTTTCTCGTTTTTCAATAACCATGACATACCTTTAATGACACTTTTGAATCTCTTTTTAACTCCAATCAACACTTATCCTTCCAAACTTTCAAAGGACTCAAGTTTCTTTAGGTTCAAGGTTTACAGAAAGCATCGTGGTGCTCACAATTTAATGTGTGCAAGGCAAGTTTGGAGCGTCGTGACGCTTCAACACAACATTACAATGTTGTGGGCTTTTTGCAAATAAGGACGTAACAGCTTTACGTCTCCGCACACAATGTTATAGGGTGTCATAGCAATGCAAGGTAGAGGCTAATACGGTATTTTATTTGCACTTTGACTTTGTGTTCGCCTAATTAAGCTCTAAATTGACATCAACATCCAAATCTACTCTTGATTTGCTCATGACCTATTAAGTAATTAAATAAGAACGTAAAATCATGGAACGATCCTAAATTAAGCAAAATTAAATATCACACTTTGATGCTATCATAGCCTCCGATGGGGTTTTGTCAGCAATAACTCCATTGGTCATCCCATCAATGGTACTTCTATTAGAAGCAAGCAAATTGAAGTAAAAGTATCGAATAAGGCAACCGTAAAAAAATTGATGATGTGGGAAAGCTAGCATATAATTCTTTATAATGTTTCCAAAACTCAAATAATAACTTTCCTATGACTTGCTTAGTAAACTTTAAATCTGAAAGAACTTTTCAAGTCTTTAAAGAAACTTAAGAGATGATTTTGGGTTAAGAGGTTAAAAGAGAAAGATTGAGAAATTATCATTAAGGTTGTTGGTGGCAATAACTAGAGTTTATAACCCTTACAAACCTCTTAAGACAAGTGTGGTGGTTAAGAGAAAATTTTATTTCAAAAGTTACTTAAGAAGAACATTTGGGTAATATGATTCTAATGTCATAGAAGGTACGTGAGTAGTGTTATGTTTGAAGCATCGTGGAAACTTAAATTAAAAAGGGAAGAAGAATGTCAAAGAAATAGGCTTAGTGGCAAGAAGGAATGGGCATGTCTTGACAAGAGAGTTTTGTTGCTATTAGGTAGGAGATGTAGAGCATGCAAGGCACCTAGAACATGCCTAGGGTAGGCTAGGAGAAGGTGTCAAAACCATGAAATGCAAGCATGAGATGGATGTTAGGTGTCAATCTCAAACCATGTAGCCTTTTTATAAATAGGTTAACTTTGGAGAAGTGCATCAAATCCACTCATGAAATTTTCTTGTTTCCACTTGAAAAACCTCCTAAATTGAGTCTAGTTGTGAGGGTGAGGTTGCTGAATCGAAAAGAGTTGAGGAGAAATATCAAAATTAGACTTGAAGCATGAAAGGTCATTTCACTTTTTGGAGGCAAGAGGGTGCACATTTAGAAGTTTTGAGCTGAAATTTGAAGGTAACATACTTAAAACATTTCTAAGAAACTTTGTAGAACGAAATTTTGTCATTTGAGTTCTAGATTTTACATTATTAAGTTATGGTTATGACCGAAAAACCTAGTTTTTGGACATTGTATGAAGGGGTCAATCGTTGGGGAGGGGCTATGCGGAAGAGGGTGATGGTGCCTTGGGATGTGCCAGGTGTGCATGGTAGGTGCACGCTGCACACAGTAGTGAGGTTGGCGGGCAGCCATGCGCGCTAGCACCAGGTCTGTCTCTCATACTTGCTCACCAACCAACCATTTTAGGCTTTTCTGGGTGTTTTTTGCGAATTTTGCTTGATGTTTTGGTATTTTTGGTTCTTAGGGATTAATTGGAGTATAAATATTTTATTTTCAGGAAAACTGAAATTTGGTGAAATTTCTCGAGCTAAGGAAGGAATCAACATGTGAGTAAAATTGGTTTTAAAATGTTATTTGATACCATGATTTGAAGCATACAAGCATTATTTTGTGAGTACTTTATTTTGAATGATTTCTAAGGAAATTTACAAGTTTTGTAGTATTTAAAGGCTTTCTTAAATGTTTATGGTTTCCAAGCTAAGGTACAAGCTTATTTAAATGTTTTTCTTGGAATTATGCCAGTACTATACAATTACCTCTAAATGTGCACATCTGGTTTCCAATCCAATTACTGGTGTCAAGGCTTTATAGAGGGGCCTATTACTATTACATCAGTTAATGTTTTGTGGCCTATGGAAAAAAAAGGTTTAGTAATATCTGACCTATGTTACAAATGTAAGAGATCACTAGTATAATATGATAAAATGTTATGGATGTTTGAAAAATCTTATGAAAAGTTTCTAAAAGCTTTATTGTACTATGTTTTCAATGATTTATATGTTTGAAGCTAAAACATCGAGCATAACTATTTAGAAATTATGGTTTGAAAATATAACTCACTGAGCATTTTAAGCCCATTCTTTCAAAATGTTTACTCTTTTTCCAGGTAAAGATCATGTTGTCCCGAGTTGAGCTCATTGCTGCCAAGCCAACCAGTCTCTCTAGAAGAAACTATGAGTTATTATAGATAAGTAGTATTGAGGTGGATGGAGGTTGTATAGAGAATTGTATAGAAATCTACATAGTCAAAACCTCTACACGTAAAATTATGTATATAATTGAATATTGTAATGAGTTGGGCTGCACTTGAATATCATTAAGATAAGAATGAGGTTTATGCTTCTGCTATATTTTTAAAAGATTAAAGGAGTAGGGTCGGCAAGTAAGATTGAGGTAAGAGATGGTATCAATTGACCTCACACCATCTCTCAGGTCATGAGAAGGTGATTCAGGAGGGGGTATCATGCTTTATATAAAAGTTCTCTTTTCTAATGTTACGGGATATAGAACTTCTCTACAAAAATATTTCTTAAATCGTTCCATGTAGTGGTGGACTTGAAAGAGAAGTAATACAATCATCTCTTTGCTCCATCAGTTCATGGAAAAGAAAAGGCCCAGGTTGAGTTGTTCCTTAGAGATACTGTGGGGCCTCATCCCGTCACCAACTATGTGAAATCCTTGAAATGCTTATGAGGACCTTCACTAGAGCTTCCTTTGAATATGAACAAGAGATGCATGAGCCCCAGTTTGAACTCGAACGGTATGGTTGTCTTGGATACATTATGCACAATGATCTTTATGTCAAGTTCAGTTTGACAACCTTTCTAAGTATTTTTTCTCTTACTTCACCCATGTATCCCTTGTAACTCTTCCTCTCCTTCTTCATTATGCACTCCTTGATCGTTCTCCTCTAATGGATCTTGATCTTGATGAAGTCTTTCTCCTATCCTTTCCCTTTGTATTCATCATTTCTTTTGATCGATATCTACGAAGAAATTCAACTCAAAACTCCCAGAAGAGCAGTAGATTAAACCAAAGAAAATTTTAA

mRNA sequence

ATGAATTGTGCGTTGGGAAAACTTCTTATTCCCGACATCTTACTTTATGCATCGAGAAGAGATTTTTCTCTCGACGTCTTACTTTATGCGTCAAGAGAACCTCTTATTCCTGACGTCTTTTATGCCGATGTCTTTTTTGGAATCGGAAAAAGCCCGATTTCTTGTAGTGGGAATCTAATAGGAGCATACTATGTTGTGAATTTTGATTTCCCTTTTCCTTCACTACTCTTCAGCCATAGGTTAAAGGCTTCCTCATGGTTTAATGCTACAAATAATGCCAAATCGAACCCAAGTCTGAAGAATCCAGTGGTTGCTCGACAAAGACCAAGGCGAGGTGGTGGTAGCTCATGGGAGGGCCTGCACGAGGTGACTGCATTAAAAGCATCGTGGTGCTCACAATTTAATGTGTGCAAGGCAAGTTTGGAGCGTCGTGACGCTTCAACACAACATTACAATGTTGTGGGCTTTTTGCAAATAAGGACGTACGTGAGTAGTGTTATGTTTGAAGCATCGTGGAAACTTAAATTAAAAAGGGAAGAAGAATGTCAAAGAAATAGGCTTAGTGGCAAGAAGGAATGGGCATGTCTTGACAAGAGAGTTTTGTTGCTATTAGTTATGGTTATGACCGAAAAACCTAGTTTTTGGACATTGTATGAAGGGGTCAATCGTTGGGGAGGGGCTATGCGGAAGAGGGTGATGGTGCCTTGGGATGTGCCAGGAAAACTGAAATTTGGTGAAATTTCTCGAGCTAAGGAAGGAATCAACATTATTGAGGTGGATGGAGGTTGTATAGAGAATTGTATAGAAATCTACATAGTCAAAACCTCTACACGGTCGGCAAGTAAGATTGAGTTTGACAACCTTTCTAAGTATTTTTTCTCTTACTTCACCCATGTATCCCTTGTAACTCTTCCTCTCCTTCTTCATTATGCACTCCTTGATCGTTCTCCTCTAATGGATCTTGATCTTGATGAAGTCTTTCTCCTATCCTTTCCCTTTGTATTCATCATTTCTTTTGATCGATATCTACGAAGAAATTCAACTCAAAACTCCCAGAAGAGCAGTAGATTAAACCAAAGAAAATTTTAA

Coding sequence (CDS)

ATGAATTGTGCGTTGGGAAAACTTCTTATTCCCGACATCTTACTTTATGCATCGAGAAGAGATTTTTCTCTCGACGTCTTACTTTATGCGTCAAGAGAACCTCTTATTCCTGACGTCTTTTATGCCGATGTCTTTTTTGGAATCGGAAAAAGCCCGATTTCTTGTAGTGGGAATCTAATAGGAGCATACTATGTTGTGAATTTTGATTTCCCTTTTCCTTCACTACTCTTCAGCCATAGGTTAAAGGCTTCCTCATGGTTTAATGCTACAAATAATGCCAAATCGAACCCAAGTCTGAAGAATCCAGTGGTTGCTCGACAAAGACCAAGGCGAGGTGGTGGTAGCTCATGGGAGGGCCTGCACGAGGTGACTGCATTAAAAGCATCGTGGTGCTCACAATTTAATGTGTGCAAGGCAAGTTTGGAGCGTCGTGACGCTTCAACACAACATTACAATGTTGTGGGCTTTTTGCAAATAAGGACGTACGTGAGTAGTGTTATGTTTGAAGCATCGTGGAAACTTAAATTAAAAAGGGAAGAAGAATGTCAAAGAAATAGGCTTAGTGGCAAGAAGGAATGGGCATGTCTTGACAAGAGAGTTTTGTTGCTATTAGTTATGGTTATGACCGAAAAACCTAGTTTTTGGACATTGTATGAAGGGGTCAATCGTTGGGGAGGGGCTATGCGGAAGAGGGTGATGGTGCCTTGGGATGTGCCAGGAAAACTGAAATTTGGTGAAATTTCTCGAGCTAAGGAAGGAATCAACATTATTGAGGTGGATGGAGGTTGTATAGAGAATTGTATAGAAATCTACATAGTCAAAACCTCTACACGGTCGGCAAGTAAGATTGAGTTTGACAACCTTTCTAAGTATTTTTTCTCTTACTTCACCCATGTATCCCTTGTAACTCTTCCTCTCCTTCTTCATTATGCACTCCTTGATCGTTCTCCTCTAATGGATCTTGATCTTGATGAAGTCTTTCTCCTATCCTTTCCCTTTGTATTCATCATTTCTTTTGATCGATATCTACGAAGAAATTCAACTCAAAACTCCCAGAAGAGCAGTAGATTAAACCAAAGAAAATTTTAA

Protein sequence

MNCALGKLLIPDILLYASRRDFSLDVLLYASREPLIPDVFYADVFFGIGKSPISCSGNLIGAYYVVNFDFPFPSLLFSHRLKASSWFNATNNAKSNPSLKNPVVARQRPRRGGGSSWEGLHEVTALKASWCSQFNVCKASLERRDASTQHYNVVGFLQIRTYVSSVMFEASWKLKLKREEECQRNRLSGKKEWACLDKRVLLLLVMVMTEKPSFWTLYEGVNRWGGAMRKRVMVPWDVPGKLKFGEISRAKEGINIIEVDGGCIENCIEIYIVKTSTRSASKIEFDNLSKYFFSYFTHVSLVTLPLLLHYALLDRSPLMDLDLDEVFLLSFPFVFIISFDRYLRRNSTQNSQKSSRLNQRKF
Homology
[Close]
BLAST of MELO3C033234 vs. NCBI nr
Match: KAA0035670.1 (Bromodomain-containing protein [Cucumis melo var. makuwa] >TYK30873.1 Bromodomain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 2.1e-13
Identity = 44/56 (78.57%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 1   MNCALGKLLIPDILLYASRRDFSLDVLLYASREPLIPDVFYADVFFGIGKSPISCS 57
           MNCA GK LI D+LLYASR  FS DVLLYA  EPLIP+VFYADVFF +GKSPISCS
Sbjct: 118 MNCASGKPLIFDVLLYASRIAFSPDVLLYALGEPLIPEVFYADVFFDVGKSPISCS 173

[Close]
BLAST of MELO3C033234 vs. NCBI nr
Match: KAA0045152.1 (global transcription factor [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 7.9e-13
Identity = 42/53 (79.25%), Postives = 45/53 (84.91%), Query Frame = 0 

Query: 7   KLLIPDILLYASRRDFSLDVLLYASREPLIPDVFYADVFFGIGKSPISCSGNL 60
           K LIPDILLYASR  FS DVLLYAS +PLIPD+FYADVFF +GKSPISCS  L
Sbjct: 235 KALIPDILLYASRITFSPDVLLYASGKPLIPDIFYADVFFDVGKSPISCSDRL 287

[Close]
BLAST of MELO3C033234 vs. NCBI nr
Match: KAA0063981.1 (Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK05155.1 Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 59.7 bits (143), Expect = 6.0e-05
Identity = 34/54 (62.96%), Postives = 36/54 (66.67%), Query Frame = 0 

Query: 1  MNCALGKLLIPDILLYASRRDFSLDVLLYASREPLIPDVFYADVFFGIGKSPIS 55
          +NCALGK LI             LDVLLYAS EPLIPDVFYADVF  IGK+ IS
Sbjct: 53 VNCALGKPLI-------------LDVLLYASGEPLIPDVFYADVFLDIGKNSIS 93

[Close]
BLAST of MELO3C033234 vs. ExPASy TrEMBL
Match: A0A5A7SXA5 (Bromodomain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00740 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.0e-13
Identity = 44/56 (78.57%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 1   MNCALGKLLIPDILLYASRRDFSLDVLLYASREPLIPDVFYADVFFGIGKSPISCS 57
           MNCA GK LI D+LLYASR  FS DVLLYA  EPLIP+VFYADVFF +GKSPISCS
Sbjct: 118 MNCASGKPLIFDVLLYASRIAFSPDVLLYALGEPLIPEVFYADVFFDVGKSPISCS 173

[Close]
BLAST of MELO3C033234 vs. ExPASy TrEMBL
Match: A0A5A7TP57 (Global transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G001530 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.8e-13
Identity = 42/53 (79.25%), Postives = 45/53 (84.91%), Query Frame = 0 

Query: 7   KLLIPDILLYASRRDFSLDVLLYASREPLIPDVFYADVFFGIGKSPISCSGNL 60
           K LIPDILLYASR  FS DVLLYAS +PLIPD+FYADVFF +GKSPISCS  L
Sbjct: 235 KALIPDILLYASRITFSPDVLLYASGKPLIPDIFYADVFFDVGKSPISCSDRL 287

[Close]
BLAST of MELO3C033234 vs. ExPASy TrEMBL
Match: A0A5D3C1C4 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00110 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.9e-05
Identity = 34/54 (62.96%), Postives = 36/54 (66.67%), Query Frame = 0 

Query: 1  MNCALGKLLIPDILLYASRRDFSLDVLLYASREPLIPDVFYADVFFGIGKSPIS 55
          +NCALGK LI             LDVLLYAS EPLIPDVFYADVF  IGK+ IS
Sbjct: 53 VNCALGKPLI-------------LDVLLYASGEPLIPDVFYADVFLDIGKNSIS 93

The following BLAST results are available for this feature:
BLAST of MELO3C033234 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0035670.12.1e-1378.57Bromodomain-containing protein [Cucumis melo var. makuwa] >TYK30873.1 Bromodomai... [more]
KAA0045152.17.9e-1379.25global transcription factor [Cucumis melo var. makuwa][more]
KAA0063981.16.0e-0562.96Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK05155.1 Ulp1-like peptidase [... [more]
BLAST of MELO3C033234 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033234 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SXA51.0e-1378.57Bromodomain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5A7TP573.8e-1379.25Global transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5D3C1C42.9e-0562.96Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415... [more]
BLAST of MELO3C033234 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033234.1MELO3C033234.1mRNA