MELO3C033215.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C033215.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3
Location	chr08: 10178148 .. 10179689 (-)
RNA-Seq Expression	MELO3C033215.jh1
Synteny	MELO3C033215.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAAAGAAAATATTCACAAACACAATCATGTACACCTATCGAAGGATTTGGCTTTCAAAGTCAAAGTGAAATACCTTCAATCTCATCTAGTGGATCTTATAAGGCACGTGCTGCTGTTCATGGTAGATTTAAACAAAATAACAAAACATATCTAGATGATGCTAAAACAGAGGTGGCTCGTTATCTGGATGAGGCTCGTATAGAAGATGAATATTTAGATTTGCTAAATTAGTGGAAGGTGAATTCCTCTCGCTTTAAGATCATTAGCCAAGTAGCCAGGAACATCTACAGTATTCCTATATCAACTGTGCCTTCTGAGTCCGTCTTTAGCACTGGAGGATGGGTGTTAGATTCTTTTCGAAGTTCTCTAACTCCTCAAATGGCAGAGGCACTCATTTGTGCTCATAATTGGATTCAATCTAAACCTTTGGATGACATGACCGAAGAAATTGACGGGGCTGAAGAAATTGATGAAGGTAATATTCTTTTTGAAGTACGCATTTAAAATTTTCAATTATCCCATATAAGCTAACTGTTTGTCATTTTGATCTAGAATTCATAAACATAGGAAAGGAGATGGAAGCCGCATTTGAGAATTTGAATAATGACTCTATGGTTTAAATCTCTACTCTTAAATCTTTATTTACATTTTTTCAAAATTGTTAACTTGTTAAATATCGAATCTTGTTTTTTTAGAGTCTTGAAGCACATTGATGGAAGCACTTTGGGTTATATGAACAAGGTGGTCTCATGAAGATGTTCATTAATTCATACCTTCACATTGCTTCATGAAGATTCTTGGGATTCAACATATGGTTACTTGTGTATTCTGAGTATTCATGAGCGGGGTTAACCGATGTGTTATGTTATTTCAGTTTTAAGACCTCGTAGTTAGTGAGGGTTTAGATTTCATTCTGTGGATTTCTAGAGGTTACTGTATGACTATTGGAGAAGCTTTAATTTGGAATTGTGCCATTTTTCGCTTGTATGTTATGACTTGTTTAGACTGCACTTTTTGAAATTGAAAATACTGTTCATTCATGGTCATGTAGTGATGGCATGCTCTTGCATTACATTTGTTTGATATCTGTTTATGAGCAGAAAAAGAAGTATCACCAGCTTAGAAGAGTTATCTGTAGGCTGTTGATTGTTGAATATAGTCTGCTGAATTGTTGACTATCATATTCTTGTTTTTTATTGTCAAATAGAGCAGAAATATTATAATTTATATCTTGTTAACTAACATTGCTTCATGAAGGTTTTTGGGATTTAGCATATGGTTTTTAATAACTTCTTTTTGGCTTCAAAGTTCTGGAAAACCATTTGGTTTCTCATTTGTCTATCACATGCACTTGGTGGTTTCAGACATAAGGTAGCTTCAGTTTGCATCTCATCATTCATTTGCTTTGATCTTTACGTATTTTTCTCTGCTTGTAGATGTAGATTCTTATATATTTTCATTGATTTATAACTTTCCAAAGAGTATCAAAGATGTTCATATTACAATGCTGGATGTTTCTGATTGGCAAGTGGATCGA

mRNA sequence

ATGTCAAAAGAAAATATTCACAAACACAATCATGTACACCTATCGAAGGATTTGGCTTTCAAAGTCAAAGTGAAATACCTTCAATCTCATCTAGTGGATCTTATAAGGCACGTGCTGCTGTTCATGGTGAATTCCTCTCGCTTTAAGATCATTAGCCAAGTAGCCAGGAACATCTACAGTATTCCTATATCAACTGTGCCTTCTGAGTCCGTCTTTAGCACTGGAGGATGGGTGTTAGATTCTTTTCGAAGTTCTCTAACTCCTCAAATGGCAGAGGCACTCATTTGTGCTCATAATTGGATTCAATCTAAACCTTTGGATGACATGACCGAAGAAATTGACGGGGCTGAAGAAATTGATGAAGAATTCATAAACATAGGAAAGGAGATGGAAGCCGCATTTGAGAATTTGAATAATGACTCTATGACTGCACTTTTTGAAATTGAAAATACTGTTCATTCATGGTCATGTAGTGATGGCATGCTCTTGCATTACATTTGTTTGATATCTGTTTATGAGCAGAAAAAGAAGTATCACCAGCTTAGAAGATTCTGGAAAACCATTTGGTTTCTCATTTGTCTATCACATGCACTTGGTGGTTTCAGACATAAGGTAGCTTCAGTTTGCATCTCATCATTCATTTGCTTTGATCTTTACAGTATCAAAGATGTTCATATTACAATGCTGGATGTTTCTGATTGGCAAGTGGATCGA

Coding sequence (CDS)

ATGTCAAAAGAAAATATTCACAAACACAATCATGTACACCTATCGAAGGATTTGGCTTTCAAAGTCAAAGTGAAATACCTTCAATCTCATCTAGTGGATCTTATAAGGCACGTGCTGCTGTTCATGGTGAATTCCTCTCGCTTTAAGATCATTAGCCAAGTAGCCAGGAACATCTACAGTATTCCTATATCAACTGTGCCTTCTGAGTCCGTCTTTAGCACTGGAGGATGGGTGTTAGATTCTTTTCGAAGTTCTCTAACTCCTCAAATGGCAGAGGCACTCATTTGTGCTCATAATTGGATTCAATCTAAACCTTTGGATGACATGACCGAAGAAATTGACGGGGCTGAAGAAATTGATGAAGAATTCATAAACATAGGAAAGGAGATGGAAGCCGCATTTGAGAATTTGAATAATGACTCTATGACTGCACTTTTTGAAATTGAAAATACTGTTCATTCATGGTCATGTAGTGATGGCATGCTCTTGCATTACATTTGTTTGATATCTGTTTATGAGCAGAAAAAGAAGTATCACCAGCTTAGAAGATTCTGGAAAACCATTTGGTTTCTCATTTGTCTATCACATGCACTTGGTGGTTTCAGACATAAGGTAGCTTCAGTTTGCATCTCATCATTCATTTGCTTTGATCTTTACAGTATCAAAGATGTTCATATTACAATGCTGGATGTTTCTGATTGGCAAGTGGATCGA

Protein sequence

MSKENIHKHNHVHLSKDLAFKVKVKYLQSHLVDLIRHVLLFMVNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSMTALFEIENTVHSWSCSDGMLLHYICLISVYEQKKKYHQLRRFWKTIWFLICLSHALGGFRHKVASVCISSFICFDLYSIKDVHITMLDVSDWQVDR

Homology

[Close]

BLAST of MELO3C033215.jh1 vs. NCBI nr
Match: KAA0062757.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis melo var. makuwa] >TYK08831.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 181 bits (458), Expect = 5.80e-54
Identity = 95/100 (95.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 43  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQ 102
           VNSSRFKIISQVARNIYSIPISTVPSESVFSTGG VLDSFRSSLTPQMA+ALICA NWIQ
Sbjct: 52  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGRVLDSFRSSLTPQMAKALICAQNWIQ 111

Query: 103 SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM 142
           SKPLDDMTEEIDG EEIDEEFINIGKEMEA FENLNNDSM
Sbjct: 112 SKPLDDMTEEIDGTEEIDEEFINIGKEMEATFENLNNDSM 151

[Close]

BLAST of MELO3C033215.jh1 vs. NCBI nr
Match: TYK11242.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 178 bits (452), Expect = 1.40e-53
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 43  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQ 102
           VN+SRFKIISQVAR+IYSIPISTVPSES FSTGG VLDSFRSSLTPQ AEALICA NWIQ
Sbjct: 14  VNASRFKIISQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQ 73

Query: 103 SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM 142
           SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
Sbjct: 74  SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM 113

[Close]

BLAST of MELO3C033215.jh1 vs. NCBI nr
Match: TYK29141.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 179 bits (455), Expect = 1.02e-52
Identity = 95/100 (95.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 43  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQ 102
           VNSSRFKIISQVAR+IYSIPISTVPSES FSTGG VLDSFRSSLTPQ AEALICA NWIQ
Sbjct: 110 VNSSRFKIISQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQ 169

Query: 103 SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM 142
           SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
Sbjct: 170 SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM 209

[Close]

BLAST of MELO3C033215.jh1 vs. NCBI nr
Match: TYK26632.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 178 bits (452), Expect = 2.99e-52
Identity = 93/100 (93.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 43  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQ 102
           VNSSRFKII QVAR+IYSIPISTVPSES FST GWVLDSFRSSLTPQ AEALICAHNWIQ
Sbjct: 111 VNSSRFKIIRQVARDIYSIPISTVPSESAFSTEGWVLDSFRSSLTPQTAEALICAHNWIQ 170

Query: 103 SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM 142
           SKPLDDMTEEIDG EEIDEEFINI KEMEAAFENLNNDSM
Sbjct: 171 SKPLDDMTEEIDGTEEIDEEFINIEKEMEAAFENLNNDSM 210

[Close]

BLAST of MELO3C033215.jh1 vs. NCBI nr
Match: KAA0068144.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 177 bits (449), Expect = 3.91e-52
Identity = 94/100 (94.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 43  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQ 102
           VNSSRFKIISQVAR+IYSIPISTVP ES FSTGG VLDSFRSSLTPQ AEALICA NWIQ
Sbjct: 86  VNSSRFKIISQVARDIYSIPISTVPFESAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQ 145

Query: 103 SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM 142
           SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
Sbjct: 146 SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM 185

[Close]

BLAST of MELO3C033215.jh1 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.0e-08
Identity = 31/66 (46.97%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 43  VNSSRFKIISQVARNIYSIPISTVPS-ESVFS--TGGWVLDSFRSSLTPQMAEALICAHN 102
           +N+ +F  +S++AR+I +IP+S V S  S+FS  TG  +LD +RSSL P++ EAL+CA +
Sbjct: 641 LNTLKFPTLSRMARDILAIPMSMVSSGNSIFSAGTGTRMLDDYRSSLRPEIVEALVCAKD 700

Query: 103 WIQSKP 106
           W+Q  P
Sbjct: 701 WLQYLP 706

[Close]

BLAST of MELO3C033215.jh1 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 8.9e-08
Identity = 37/108 (34.26%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 1   MSKENIHKHNHVHLSKDLAFKVKVKYLQSHLVD-LIRHVLLFMVNS------SRFKIISQ 60
           M  E+    N++H  KD   +V+   L  ++ + L++H   F + S      + + I++Q
Sbjct: 645 MENEDDEFQNYLHELKDYD-QVESNELDKYMSEPLLKHSGQFDILSWWRGRVAEYPILTQ 704

Query: 61  VARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWI 102
           +AR++ +I +STV SES FS GG V+D +R+ L  ++ EALIC  +W+
Sbjct: 705 IARDVLAIQVSTVASESAFSAGGRVVDPYRNRLGSEIVEALICTKDWV 751

[Close]

BLAST of MELO3C033215.jh1 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.9e-08
Identity = 37/108 (34.26%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 1   MSKENIHKHNHVHLSKDLAFKVKVKYLQSHLVD-LIRHVLLFMVNS------SRFKIISQ 60
           M  E+    N++H  KD   +V+   L  ++ + L++H   F + S      + + I++Q
Sbjct: 614 MENEDDEFQNYLHELKDYD-QVESNELDKYMSEPLLKHSGQFDILSWWRGRVAEYPILTQ 673

Query: 61  VARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWI 102
           +AR++ +I +STV SES FS GG V+D +R+ L  ++ EALIC  +W+
Sbjct: 674 IARDVLAIQVSTVASESAFSAGGRVVDPYRNRLGSEIVEALICTKDWV 720

[Close]

BLAST of MELO3C033215.jh1 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.0e-07
Identity = 34/88 (38.64%), Postives = 56/88 (63.64%), Query Frame = 0


Query: 25  KYLQSHLVDLIRHVLL---FMVNSSRFKIISQVARNIYSIPISTVPS-ESVFS---TGGW 84
           +YL+  L+  I+   +   + +N+ +F  +S++AR++ +IP+S V S  S+FS   TG  
Sbjct: 650 QYLEEALMPRIQDFEILEWWKLNTIKFPTLSKMARDVLAIPMSMVSSGSSIFSATATGSQ 709

Query: 85  VLDSFRSSLTPQMAEALICAHNWIQSKP 106
           +LD +RSSL P+  EAL CA +W+Q  P
Sbjct: 710 MLDDYRSSLRPETVEALFCAKDWLQYPP 737

[Close]

BLAST of MELO3C033215.jh1 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.4e-07
Identity = 29/66 (43.94%), Postives = 47/66 (71.21%), Query Frame = 0


Query: 43  VNSSRFKIISQVARNIYSIPISTVPS-ESVFS--TGGWVLDSFRSSLTPQMAEALICAHN 102
           +N+ ++  +S++AR+I +IP+S V S  S+FS  TG  +LD +RSS  P++ EAL+CA +
Sbjct: 641 LNTLKYPTLSKMARDILAIPMSMVSSGNSIFSAGTGTRMLDDYRSSSRPEIVEALVCAKD 700

Query: 103 WIQSKP 106
           W+Q  P
Sbjct: 701 WLQYLP 706

[Close]

BLAST of MELO3C033215.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V6W1 (Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold87G00140 PE=4 SV=1)

HSP 1 Score: 181 bits (458), Expect = 2.81e-54
Identity = 95/100 (95.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 43  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQ 102
           VNSSRFKIISQVARNIYSIPISTVPSESVFSTGG VLDSFRSSLTPQMA+ALICA NWIQ
Sbjct: 52  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGRVLDSFRSSLTPQMAKALICAQNWIQ 111

Query: 103 SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM 142
           SKPLDDMTEEIDG EEIDEEFINIGKEMEA FENLNNDSM
Sbjct: 112 SKPLDDMTEEIDGTEEIDEEFINIGKEMEATFENLNNDSM 151

[Close]

BLAST of MELO3C033215.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CIX0 (Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00970 PE=4 SV=1)

HSP 1 Score: 178 bits (452), Expect = 6.76e-54
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 43  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQ 102
           VN+SRFKIISQVAR+IYSIPISTVPSES FSTGG VLDSFRSSLTPQ AEALICA NWIQ
Sbjct: 14  VNASRFKIISQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQ 73

Query: 103 SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM 142
           SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
Sbjct: 74  SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM 113

[Close]

BLAST of MELO3C033215.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E0B8 (Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G002890 PE=4 SV=1)

HSP 1 Score: 179 bits (455), Expect = 4.95e-53
Identity = 95/100 (95.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 43  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQ 102
           VNSSRFKIISQVAR+IYSIPISTVPSES FSTGG VLDSFRSSLTPQ AEALICA NWIQ
Sbjct: 110 VNSSRFKIISQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQ 169

Query: 103 SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM 142
           SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
Sbjct: 170 SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM 209

[Close]

BLAST of MELO3C033215.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DT32 (Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002780 PE=4 SV=1)

HSP 1 Score: 178 bits (452), Expect = 1.45e-52
Identity = 93/100 (93.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 43  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQ 102
           VNSSRFKII QVAR+IYSIPISTVPSES FST GWVLDSFRSSLTPQ AEALICAHNWIQ
Sbjct: 111 VNSSRFKIIRQVARDIYSIPISTVPSESAFSTEGWVLDSFRSSLTPQTAEALICAHNWIQ 170

Query: 103 SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM 142
           SKPLDDMTEEIDG EEIDEEFINI KEMEAAFENLNNDSM
Sbjct: 171 SKPLDDMTEEIDGTEEIDEEFINIEKEMEAAFENLNNDSM 210

[Close]

BLAST of MELO3C033215.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VL49 (Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001090 PE=4 SV=1)

HSP 1 Score: 177 bits (449), Expect = 1.89e-52
Identity = 94/100 (94.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 43  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQ 102
           VNSSRFKIISQVAR+IYSIPISTVP ES FSTGG VLDSFRSSLTPQ AEALICA NWIQ
Sbjct: 86  VNSSRFKIISQVARDIYSIPISTVPFESAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQ 145

Query: 103 SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM 142
           SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
Sbjct: 146 SKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM 185

[Close]

BLAST of MELO3C033215.jh1 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-06
Identity = 22/58 (37.93%), Postives = 36/58 (62.07%), Query Frame = 0


Query: 44  NSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWI 102
           N  ++  +S++AR+I SIP+S    + VF      +D +++SL P+  EALICA  W+
Sbjct: 617 NKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALICAREWL 674

The following BLAST results are available for this feature:

BLAST of MELO3C033215.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062757.1	5.80e-54	95.00	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis...	[more]
TYK11242.1	1.40e-53	94.00	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis...	[more]
TYK29141.1	1.02e-52	95.00	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis...	[more]
TYK26632.1	2.99e-52	93.00	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis...	[more]
KAA0068144.1	3.91e-52	94.00	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis...	[more]

BLAST of MELO3C033215.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AVI0	4.0e-08	46.97	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
P08770	8.9e-08	34.26	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]
P03010	8.9e-08	34.26	Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1	[more]
Q75HY5	2.0e-07	38.64	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
B9FJG3	4.4e-07	43.94	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]

BLAST of MELO3C033215.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V6W1	2.81e-54	95.00	Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucum...	[more]
A0A5D3CIX0	6.76e-54	94.00	Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucum...	[more]
A0A5D3E0B8	4.95e-53	95.00	Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucum...	[more]
A0A5D3DT32	1.45e-52	93.00	Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucum...	[more]
A0A5A7VL49	1.89e-52	94.00	Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucum...	[more]

BLAST of MELO3C033215.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	1.7e-06	37.93	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 42..101 e-value: 1.0E-17 score: 63.7
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 24..110
None	No IPR available	PANTHER	PTHR23272:SF138	SUBFAMILY NOT NAMED	coord: 24..110
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 42..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033215.jh1.t1	MELO3C033215.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity