MELO3C033206.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C033206.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionNBS-LRR type resistance protein
Locationchr08: 9891798 .. 9894938 (+)
RNA-Seq ExpressionMELO3C033206.jh1
SyntenyMELO3C033206.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTTCACGCGTCCTTCCTGCCTCTCGCCGGTATGCCCCTCGCTGTGCCCTTACCTGAAAAGTTAAAGAAGAGAAAAGGGTGAGTATAAACATACCCAGTAAGGGACCTACTACTGGGCCCGTTAGGGGACAACAGTTAACTTCCTATTCGGGGGTACCCTACATAACAGTCTAGTGGTTCCGTAGAACGCACATATCAGTCTAGTGCTCCCGAAGGATGCACATATCAGTCTAGTGCTCCCGAAGGTTGCACATATCAGTCTAGTGCTCCCGAAGGATGCACACATCAGTCTAGTGCTCCCGAAGGATGCACACATCAGTCTCGTGCTCCCGAAGGATGCACACATCAGTCTCGTGCTCCCGAAGGATGCACACATCAGTCTAGTGCTCCCGAAGGATGCACACATCAGTCTAGTGCTCCCGAAGGATGTACACATCAGTCTAGTGCTCCCGAAGGATGCACACATCAGTCTAGTGCTCCCGAAGGATGCACACATCAGTCTAGTGCTCCCGAAGGATGCACACATCAATCTAGTGCTCCCGAAGGATGCACACATCAGTCTAGTGCTCCCGAAGGATGCACACATCAGTCTAGTGCTCCCGAAGGATGCACAGATCAGTCTAGTGCTCCCGAAGGATGCACATATCCGTAAGGCACACTACCCCATAGATGAAGCTAACCGTTACCCCTCAGTCCATACTAAACCGTCTACAACAGTCACACCCCAACGACATTCATATTACAATTCCGCCATAGGCTTTGTCAGTCAGATAGTATAGGTTTAAACAACTACACCCTCAGTTGTTATACGCATCACCAATTCGCACACCATTAGGAAAAACCCTAGACCCAATCAACTAACCAACCAAAACCGGACTCACTGTCCTTCCCCGTCCAAACTCCATGATCAACATCCAGACCAATGATTACTACATACTGAACCGTAACTTCAAGGTCCATCAACATAAAATTTCAATCTACAATTAGCAGTCACAGTACCTTTACATCAGACAAAATATAATAACAGTGCTTAACAGTCAACACACATACAGTTATTCAGTACAGTCACTAACGTGTAATCCCCTGTGGATTACTATGTTTTCAGCCTCGATCCGAGGTCCAGTAGTAGGAAAACCCTTACCTGATACTCGGTTATGCCCCTCGATCGAATCCACGCTCAACGGATCAACCTAAAAGAAAACACAAAGGTTTTAGTTGATGACTCTAGTAGAAGTCGTTTTAAAAGGTCCGAAACGACACCCGTTGACTTACCCAAAGAAAGGAAAGCTATCTCCAAACAAGCCTGCCGTGGGATCCGAGAACTTAAGCGTCAACTCCTTACTACCTTCAAGGCAGAAAAGTAGGGCCATATCTTATTTCAACATTCAAACTCGAATCGGATGTGGTAACATTAAGGAATTCATCAAAACAATCCTTACCGAAGACTCACCGTGACCCGAAGTGGAGGGAGGAAGGCTTAGGTGGCTCGGCTCGGCTCGGCTCACTCTCGGCTCGGCTCGGTTTGGCCCCGGCTCACGGCTCGGCTCACTCTCGGCTCGGCTCGGCTTGGCCTCGGCTCGCGGCTCGGCTCAACTCGGCTCGGCTCGGCTTGGCCTCGGCTCGGCTCGGCTCGGCTCGGTCTTCGGCTTGTCTTGGCTCGCGGCTTGACTCGGCTGGTCTTCGGCTTGCCTCGGCTCGCGGCTCGGCTCGCGGCTCGTGGCTTGGCGCGGATCGCTACTCGGCTCGGATTTGCTTGTGGCTCGCGGCTCTGCTGGAAATGGGTCTCGGGTCGGGTCAGCTTGGAAACGGGTTCTCGGGTCGGCTTCACTTCACAGCTCGTGCATTCCTTCCCCCTTCCGGCGACGACGGCGCTCCCCTCTGTGTTCTGTCGGCGTCGGAAACACGAGATGAGAACGGAGAGGCTGCCGGCGGTGGCAGAAACGAAGAGAGAGAGAGAGAAACGTCGGCTGTAGGTGGACGGCAGGCGGCGCGACTTGCGGATGGTGGCTGCGGCGAACGACCGGCGAAGCTAAGAACGCCGACGGAGATGGAGATAGGGACAGAGGACGGAGACGGAGAGGATGGAAGAGAGGTGGTGGCGGACACGGTCGGAAGGAGAAGAGAATGAAGAGGAAGAGATGAGGCGGCGGAGAGAAATCGAAAACGAAGGGGCGTGTGTTCGCGCGCGCCTCCTTTAGGGTTTTTTTAAAAAAAAAATTATTATATATATATATACATACTTTTAATAATTATAAAATAATAATAATAATAATATAAAGTAATAATAATAATATATAAAAATATTAATATTAAATAATAAAATAAATTAACATTAGATAATGATAATGTTATTGTTTTAAAATAATTATATTACTATAATATTAAATAATAATAATAATTATAATATTAATATTATAATAAATAAAATAAATATTAATAATAATAATATAATTAATATTATATTATTATTATATCAACTTACACCAACATTTTAGATTTCCGAAAAATTTACATAAAACGAGAAAATTTTACCTCGAATTTTCGGGGCGTTACACACGTCTTGTAGGATTCTTGCTCAACAGTGGAAAACTTATAGAATTCAATTGATTTATAATATCTTGTCTAGATAAAATATTTGGACTTGCTCGTAATTCTTGTTTTCCATAATGTTGCCTACTTTTACGCCATGCATGTGTTAAAGGTAGATATCTACAATGTCCCATATAACAATCTCTTTAGTCCCATTGAGCTTGTATCAACATTGAAAATTTCGGCATGCTTTATAACCTTTTGTCCTCCAACCAGATAAATCACCATAAGCTGGAAAATCATTTATTGTCCACAGCAGTGCAGCTCGAAGTTGGAAGAAATAAGCACTGAAACTATCATACGTTTGAATACCATCCACCTACAACTCATTTAACTCACCTATCAATGGTTGTAAGTAAATATCAATTTCTTTTCCAGGAGACCTTGGACCAAGGATGAGTAAAGATAGAAAAGTGAATTGTGCTTTCATACACTTCCAAAAAGGCAAGTTGTATGGAATGAGTATTACTGGCCACATGCTGTATGATGTGCTCATGTTTCCAAATGGATTAAACCCATCAGAAGAAAGTGCTAATCTGACATTTTGA

mRNA sequence

ATGGCCTTCACGCGTCCTTCCTGCCTCTCGCCGGTATGCCCCTCGCTGTGCCCTTACCTGAAAAAACGCACATATCAGTCTAGTGCTCCCGAAGGATGCACATATCAGTCTAGTGCTCCCGAAGGTTGCACATATCAGTCTAGTGCTCCCGAAGGATGCACACATCAGTCTAGTGCTCCCGAAGGATGCACACATCAGTCTCGTGCTCCCGAAGGATGCACACATCAGTCTCGAGACCTTGGACCAAGGATGAGTAAAGATAGAAAAGTGAATTGTGCTTTCATACACTTCCAAAAAGGCAAGTTGTATGGAATGAGTATTACTGGCCACATGCTGTATGATGTGCTCATGTTTCCAAATGGATTAAACCCATCAGAAGAAAGTGCTAATCTGACATTTTGA

Coding sequence (CDS)

ATGGCCTTCACGCGTCCTTCCTGCCTCTCGCCGGTATGCCCCTCGCTGTGCCCTTACCTGAAAAAACGCACATATCAGTCTAGTGCTCCCGAAGGATGCACATATCAGTCTAGTGCTCCCGAAGGTTGCACATATCAGTCTAGTGCTCCCGAAGGATGCACACATCAGTCTAGTGCTCCCGAAGGATGCACACATCAGTCTCGTGCTCCCGAAGGATGCACACATCAGTCTCGAGACCTTGGACCAAGGATGAGTAAAGATAGAAAAGTGAATTGTGCTTTCATACACTTCCAAAAAGGCAAGTTGTATGGAATGAGTATTACTGGCCACATGCTGTATGATGTGCTCATGTTTCCAAATGGATTAAACCCATCAGAAGAAAGTGCTAATCTGACATTTTGA

Protein sequence

MAFTRPSCLSPVCPSLCPYLKKRTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSRAPEGCTHQSRDLGPRMSKDRKVNCAFIHFQKGKLYGMSITGHMLYDVLMFPNGLNPSEESANLTF
Homology
[Close]
BLAST of MELO3C033206.jh1 vs. NCBI nr
Match: TYK14620.1 (mucin-3A-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 148 bits (373), Expect = 3.36e-43
Identity = 72/77 (93.51%), Postives = 73/77 (94.81%), Query Frame = 0 

Query: 1  MAFTRPSCLSPVCPSLCPYLKKRTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCTHQSSAP 60
          MAFTRPSCLS VCPSLCPYLKKRTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCTHQSSA 
Sbjct: 1  MAFTRPSCLSSVCPSLCPYLKKRTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCTHQSSAL 60

Query: 61 EGCTHQSRAPEGCTHQS 77
          EGCTHQS A EGCT+QS
Sbjct: 61 EGCTHQSSALEGCTYQS 77

[Close]
BLAST of MELO3C033206.jh1 vs. NCBI nr
Match: KAA0066505.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 144 bits (363), Expect = 1.34e-41
Identity = 72/83 (86.75%), Postives = 74/83 (89.16%), Query Frame = 0 

Query: 1  MAFTRPSCLSPVCPSLCPYLK------KRTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCT 60
          MAFTRPSCLS VCPSLCPYLK      +RTYQSSAPEGCTYQSSAPEGCT+QSSA EGCT
Sbjct: 1  MAFTRPSCLSLVCPSLCPYLKSLRREKERTYQSSAPEGCTYQSSAPEGCTHQSSASEGCT 60

Query: 61 HQSSAPEGCTHQSRAPEGCTHQS 77
          HQSSAPEGCTHQS APEGCTHQS
Sbjct: 61 HQSSAPEGCTHQSSAPEGCTHQS 83

[Close]
BLAST of MELO3C033206.jh1 vs. NCBI nr
Match: KAA0037271.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 143 bits (360), Expect = 1.54e-41
Identity = 70/83 (84.34%), Postives = 75/83 (90.36%), Query Frame = 0 

Query: 1  MAFTRPSCLSPVCPSLCPYLK------KRTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCT 60
          MAFTRPSCLS VCP+LCPYLK      +RTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCT
Sbjct: 1  MAFTRPSCLSSVCPALCPYLKSLRREKERTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCT 60

Query: 61 HQSSAPEGCTHQSRAPEGCTHQS 77
          HQS+APEGCT+QS APEGCT+QS
Sbjct: 61 HQSTAPEGCTYQSSAPEGCTYQS 83

[Close]
BLAST of MELO3C033206.jh1 vs. NCBI nr
Match: KAA0056295.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK05206.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 143 bits (360), Expect = 2.08e-41
Identity = 71/84 (84.52%), Postives = 75/84 (89.29%), Query Frame = 0 

Query: 1  MAFTRPSCLSPVCPSLCPYLK------KRTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCT 60
          MAFTRPSCLS VCPSLCPYLK      +RTYQS+APEG TYQSSAPEGCT+QSSAPEGCT
Sbjct: 1  MAFTRPSCLSSVCPSLCPYLKSQRREKERTYQSNAPEGYTYQSSAPEGCTHQSSAPEGCT 60

Query: 61 HQSSAPEGCTHQSRAPEGCTHQSR 78
          +QS APEGCTHQSRAPEGCTHQSR
Sbjct: 61 YQSGAPEGCTHQSRAPEGCTHQSR 84

[Close]
BLAST of MELO3C033206.jh1 vs. NCBI nr
Match: TYK08735.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 143 bits (360), Expect = 2.83e-41
Identity = 71/83 (85.54%), Postives = 73/83 (87.95%), Query Frame = 0 

Query: 1  MAFTRPSCLSPVCPSLCPYLK------KRTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCT 60
          MAFTRPSCLS VCP LCPYLK      +RTYQSSAPEGCTYQSSAPEGCTYQ SAPEGCT
Sbjct: 1  MAFTRPSCLSSVCPWLCPYLKSLRREKERTYQSSAPEGCTYQSSAPEGCTYQPSAPEGCT 60

Query: 61 HQSSAPEGCTHQSRAPEGCTHQS 77
          HQSSAPEGCTHQS APEGCT+QS
Sbjct: 61 HQSSAPEGCTHQSSAPEGCTYQS 83

[Close]
BLAST of MELO3C033206.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CT56 (Mucin-3A-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1275G00060 PE=4 SV=1)

HSP 1 Score: 148 bits (373), Expect = 1.63e-43
Identity = 72/77 (93.51%), Postives = 73/77 (94.81%), Query Frame = 0 

Query: 1  MAFTRPSCLSPVCPSLCPYLKKRTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCTHQSSAP 60
          MAFTRPSCLS VCPSLCPYLKKRTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCTHQSSA 
Sbjct: 1  MAFTRPSCLSSVCPSLCPYLKKRTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCTHQSSAL 60

Query: 61 EGCTHQSRAPEGCTHQS 77
          EGCTHQS A EGCT+QS
Sbjct: 61 EGCTHQSSALEGCTYQS 77

[Close]
BLAST of MELO3C033206.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VL90 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G00530 PE=4 SV=1)

HSP 1 Score: 144 bits (363), Expect = 6.51e-42
Identity = 72/83 (86.75%), Postives = 74/83 (89.16%), Query Frame = 0 

Query: 1  MAFTRPSCLSPVCPSLCPYLK------KRTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCT 60
          MAFTRPSCLS VCPSLCPYLK      +RTYQSSAPEGCTYQSSAPEGCT+QSSA EGCT
Sbjct: 1  MAFTRPSCLSLVCPSLCPYLKSLRREKERTYQSSAPEGCTYQSSAPEGCTHQSSASEGCT 60

Query: 61 HQSSAPEGCTHQSRAPEGCTHQS 77
          HQSSAPEGCTHQS APEGCTHQS
Sbjct: 61 HQSSAPEGCTHQSSAPEGCTHQS 83

[Close]
BLAST of MELO3C033206.jh1 vs. ExPASy TrEMBL
Match: A0A5A7T6P6 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold68G00040 PE=4 SV=1)

HSP 1 Score: 143 bits (360), Expect = 7.46e-42
Identity = 70/83 (84.34%), Postives = 75/83 (90.36%), Query Frame = 0 

Query: 1  MAFTRPSCLSPVCPSLCPYLK------KRTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCT 60
          MAFTRPSCLS VCP+LCPYLK      +RTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCT
Sbjct: 1  MAFTRPSCLSSVCPALCPYLKSLRREKERTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCT 60

Query: 61 HQSSAPEGCTHQSRAPEGCTHQS 77
          HQS+APEGCT+QS APEGCT+QS
Sbjct: 61 HQSTAPEGCTYQSSAPEGCTYQS 83

[Close]
BLAST of MELO3C033206.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C459 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00070 PE=4 SV=1)

HSP 1 Score: 143 bits (360), Expect = 1.01e-41
Identity = 71/84 (84.52%), Postives = 75/84 (89.29%), Query Frame = 0 

Query: 1  MAFTRPSCLSPVCPSLCPYLK------KRTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCT 60
          MAFTRPSCLS VCPSLCPYLK      +RTYQS+APEG TYQSSAPEGCT+QSSAPEGCT
Sbjct: 1  MAFTRPSCLSSVCPSLCPYLKSQRREKERTYQSNAPEGYTYQSSAPEGCTHQSSAPEGCT 60

Query: 61 HQSSAPEGCTHQSRAPEGCTHQSR 78
          +QS APEGCTHQSRAPEGCTHQSR
Sbjct: 61 YQSGAPEGCTHQSRAPEGCTHQSR 84

[Close]
BLAST of MELO3C033206.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CB72 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00440 PE=4 SV=1)

HSP 1 Score: 143 bits (360), Expect = 1.37e-41
Identity = 71/83 (85.54%), Postives = 73/83 (87.95%), Query Frame = 0 

Query: 1  MAFTRPSCLSPVCPSLCPYLK------KRTYQSSAPEGCTYQSSAPEGCTYQSSAPEGCT 60
          MAFTRPSCLS VCP LCPYLK      +RTYQSSAPEGCTYQSSAPEGCTYQ SAPEGCT
Sbjct: 1  MAFTRPSCLSSVCPWLCPYLKSLRREKERTYQSSAPEGCTYQSSAPEGCTYQPSAPEGCT 60

Query: 61 HQSSAPEGCTHQSRAPEGCTHQS 77
          HQSSAPEGCTHQS APEGCT+QS
Sbjct: 61 HQSSAPEGCTHQSSAPEGCTYQS 83

The following BLAST results are available for this feature:
BLAST of MELO3C033206.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK14620.13.36e-4393.51mucin-3A-like isoform X2 [Cucumis melo var. makuwa][more]
KAA0066505.11.34e-4186.75NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0037271.11.54e-4184.34NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0056295.12.08e-4184.52NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK05206.1 NBS-LRR t... [more]
TYK08735.12.83e-4185.54NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C033206.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033206.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CT561.63e-4393.51Mucin-3A-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A5A7VL906.51e-4286.75NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7T6P67.46e-4284.34NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3C4591.01e-4184.52NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3CB721.37e-4185.54NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
BLAST of MELO3C033206.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033206.jh1.t1MELO3C033206.jh1.t1mRNA