MELO3C033200 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033200
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Beta-glucosidase
Location	chr12: 1051171 .. 1052098 (+)
RNA-Seq Expression	MELO3C033200
Synteny	MELO3C033200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTCTTTAGTTGAAGGGTTGCAGGGGAAGCCACCTAAAGGATACCCAAAAGGCTATCCATTTGTAGCTGGAAGGTAATTAAAACAAAAGTTTATCTCACATACCCATTAGATATCAATACTTTTACGTGTTTTCTAAATATGTATCTAGTATTCAATTTGTATTCAATTTGACGCATATGTATTTGGCGTATCTGTTCTTATCGTGTGTCCTTTGTTTTATATATGTGAAGGGGATGCATTGCGACCTTCAAAAGAAAAACAGTTATTTGATATTTCTCGATCTAAAATTAAATGGGAGGAAAAAACAAATAAAAACAAAATCCTTAAATCATCTAATCTTACTTTTCCATGCTTGAGTACCCACGAGGTAATGCAAAAAATAACTCAATGTTTTCAACGATTCAACTAAAGAAGTTCTTCATTTATCTATCACACTTATATTTCACATTTTATGCTTTTTAGTGTATTGCATTTGATATCTTTTTGTCTAGTTTTCATATATACTAGATTTTTTAATTAAAAATAATGTATCCTCAATGTACCATTATCATAGTTCTTTTAGAAATTGACAATTTGACATGTTATCGTAATCTATCCTATTTGTATTTGTGACTCATTGACTCCACTTATAATGATGGCAATCAAGATTAGTCAGTATGAACATATTTTTGTTTTTGAATACTATTGTTCTTAATGATTATTGTTTCTTTCTATTTTACCTCAGAAATAATGTAATTGCATGTGCAAAACATTTTGTTGGAGATGGAGGAACTGATAAAGGTTTGAATGAAGGAAATACCATTATTGATTCTTATGATGAATTGGAAAGGATCCATATGGCTCCTTACTTGGACTGTATTGCTCAAGGAGTTTCAACTGTTATGGCATCTTATTCCAGCTGGAATGGAAATCCCCTTCATGCT

mRNA sequence

ATGACTTCTTTAGTTGAAGGGTTGCAGGGGAAGCCACCTAAAGGATACCCAAAAGGCTATCCATTTGTAGCTGGAAGAAATAATGTAATTGCATGTGCAAAACATTTTGTTGGAGATGGAGGAACTGATAAAGGTTTGAATGAAGGAAATACCATTATTGATTCTTATGATGAATTGGAAAGGATCCATATGGCTCCTTACTTGGACTGTATTGCTCAAGGAGTTTCAACTGTTGAATGGAAATCCCCTTCATGCT

Coding sequence (CDS)

ATGACTTCTTTAGTTGAAGGGTTGCAGGGGAAGCCACCTAAAGGATACCCAAAAGGCTATCCATTTGTAGCTGGAAGAAATAATGTAATTGCATGTGCAAAACATTTTGTTGGAGATGGAGGAACTGATAAAGGTTTGAATGAAGGAAATACCATTATTGATTCTTATGATGAATTGGAAAGGATCCATATGGCTCCTTACTTGGACTGTATTGCTCAAGGAGTTTCAACTGTTGAATGGAAATCCCCTTCATGC

Protein sequence

MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELERIHMAPYLDCIAQGVSTVEWKSPSC

Homology

[Close]

BLAST of MELO3C033200 vs. NCBI nr
Match: XP_008457398.2 (PREDICTED: beta-glucosidase BoGH3B-like [Cucumis melo])

HSP 1 Score: 169.5 bits (428), Expect = 1.3e-38
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1   MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 60
           MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE
Sbjct: 185 MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 244

Query: 61  RIHMAPYLDCIAQGVSTV 79
           RIHMAPYLDCIAQGVSTV
Sbjct: 245 RIHMAPYLDCIAQGVSTV 262

[Close]

BLAST of MELO3C033200 vs. NCBI nr
Match: TYJ97332.1 (beta-glucosidase BoGH3B-like [Cucumis melo var. makuwa])

HSP 1 Score: 169.5 bits (428), Expect = 1.3e-38
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1   MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 60
           MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE
Sbjct: 177 MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 236

Query: 61  RIHMAPYLDCIAQGVSTV 79
           RIHMAPYLDCIAQGVSTV
Sbjct: 237 RIHMAPYLDCIAQGVSTV 254

[Close]

BLAST of MELO3C033200 vs. NCBI nr
Match: KAA0031800.1 (beta-glucosidase BoGH3B-like [Cucumis melo var. makuwa])

HSP 1 Score: 169.5 bits (428), Expect = 1.3e-38
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 60
          MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE
Sbjct: 1  MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 60

Query: 61 RIHMAPYLDCIAQGVSTV 79
          RIHMAPYLDCIAQGVSTV
Sbjct: 61 RIHMAPYLDCIAQGVSTV 78

[Close]

BLAST of MELO3C033200 vs. NCBI nr
Match: XP_004150629.2 (uncharacterized protein LOC101214999 isoform X1 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 2.4e-37
Identity = 75/78 (96.15%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1   MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 60
           MTSLVEGLQGKPP+GYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE
Sbjct: 190 MTSLVEGLQGKPPEGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 249

Query: 61  RIHMAPYLDCIAQGVSTV 79
           RIH+APYLDCIAQG+STV
Sbjct: 250 RIHIAPYLDCIAQGLSTV 267

[Close]

BLAST of MELO3C033200 vs. NCBI nr
Match: KAE8653276.1 (hypothetical protein Csa_023195 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 2.4e-37
Identity = 75/78 (96.15%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1   MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 60
           MTSLVEGLQGKPP+GYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE
Sbjct: 170 MTSLVEGLQGKPPEGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 229

Query: 61  RIHMAPYLDCIAQGVSTV 79
           RIH+APYLDCIAQG+STV
Sbjct: 230 RIHIAPYLDCIAQGLSTV 247

[Close]

BLAST of MELO3C033200 vs. ExPASy TrEMBL
Match: A0A5D3BBX9 (Beta-glucosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001380 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.2e-39
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1   MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 60
           MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE
Sbjct: 177 MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 236

Query: 61  RIHMAPYLDCIAQGVSTV 79
           RIHMAPYLDCIAQGVSTV
Sbjct: 237 RIHMAPYLDCIAQGVSTV 254

[Close]

BLAST of MELO3C033200 vs. ExPASy TrEMBL
Match: A0A5A7SM16 (Beta-glucosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00430 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.2e-39
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 60
          MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE
Sbjct: 1  MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 60

Query: 61 RIHMAPYLDCIAQGVSTV 79
          RIHMAPYLDCIAQGVSTV
Sbjct: 61 RIHMAPYLDCIAQGVSTV 78

[Close]

BLAST of MELO3C033200 vs. ExPASy TrEMBL
Match: A0A1S3C6Q1 (Beta-glucosidase OS=Cucumis melo OX=3656 GN=LOC107990298 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.2e-39
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1   MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 60
           MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE
Sbjct: 185 MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 244

Query: 61  RIHMAPYLDCIAQGVSTV 79
           RIHMAPYLDCIAQGVSTV
Sbjct: 245 RIHMAPYLDCIAQGVSTV 262

[Close]

BLAST of MELO3C033200 vs. ExPASy TrEMBL
Match: A0A0A0LXK2 (Beta-glucosidase OS=Cucumis sativus OX=3659 GN=Csa_1G528540 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.2e-37
Identity = 75/78 (96.15%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1   MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 60
           MTSLVEGLQGKPP+GYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE
Sbjct: 177 MTSLVEGLQGKPPEGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 236

Query: 61  RIHMAPYLDCIAQGVSTV 79
           RIH+APYLDCIAQG+STV
Sbjct: 237 RIHIAPYLDCIAQGLSTV 254

[Close]

BLAST of MELO3C033200 vs. ExPASy TrEMBL
Match: A0A0A0LV38 (Beta-glucosidase OS=Cucumis sativus OX=3659 GN=Csa_1G528550 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.4e-35
Identity = 74/78 (94.87%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1   MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 60
           MT LVEGLQGKPP GYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTI  SYDELE
Sbjct: 176 MTCLVEGLQGKPPTGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIA-SYDELE 235

Query: 61  RIHMAPYLDCIAQGVSTV 79
           RIHMAPYLDCIAQGVSTV
Sbjct: 236 RIHMAPYLDCIAQGVSTV 252

[Close]

BLAST of MELO3C033200 vs. TAIR 10
Match: AT3G47040.1 (Glycosyl hydrolase family protein )

HSP 1 Score: 140.2 bits (352), Expect = 7.7e-34
Identity = 61/78 (78.21%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1   MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 60
           ++SLV GLQG+PPK +P GYPF+AGRNNV+ACAKHFVGDGGTDKG+NEGNTI+ SY+ELE
Sbjct: 203 LSSLVSGLQGEPPKEHPNGYPFLAGRNNVVACAKHFVGDGGTDKGINEGNTIV-SYEELE 262

Query: 61  RIHMAPYLDCIAQGVSTV 79
           +IH+APYL+C+AQGVSTV
Sbjct: 263 KIHLAPYLNCLAQGVSTV 279

[Close]

BLAST of MELO3C033200 vs. TAIR 10
Match: AT3G47040.2 (Glycosyl hydrolase family protein )

HSP 1 Score: 140.2 bits (352), Expect = 7.7e-34
Identity = 61/78 (78.21%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1   MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 60
           ++SLV GLQG+PPK +P GYPF+AGRNNV+ACAKHFVGDGGTDKG+NEGNTI+ SY+ELE
Sbjct: 211 LSSLVSGLQGEPPKEHPNGYPFLAGRNNVVACAKHFVGDGGTDKGINEGNTIV-SYEELE 270

Query: 61  RIHMAPYLDCIAQGVSTV 79
           +IH+APYL+C+AQGVSTV
Sbjct: 271 KIHLAPYLNCLAQGVSTV 287

[Close]

BLAST of MELO3C033200 vs. TAIR 10
Match: AT3G47000.1 (Glycosyl hydrolase family protein )

HSP 1 Score: 135.2 bits (339), Expect = 2.5e-32
Identity = 61/78 (78.21%), Postives = 69/78 (88.46%), Query Frame = 0


Query: 1   MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 60
           MTSLV GLQG PP+ +P GYPFVAGRNNV+AC KHFVGDGGTDKG+NEGNTI  SY+ELE
Sbjct: 178 MTSLVSGLQGVPPEEHPNGYPFVAGRNNVVACVKHFVGDGGTDKGINEGNTIA-SYEELE 237

Query: 61  RIHMAPYLDCIAQGVSTV 79
           +IH+ PYL C+AQGVSTV
Sbjct: 238 KIHIPPYLKCLAQGVSTV 254

[Close]

BLAST of MELO3C033200 vs. TAIR 10
Match: AT3G47010.1 (Glycosyl hydrolase family protein )

HSP 1 Score: 131.7 bits (330), Expect = 2.7e-31
Identity = 59/78 (75.64%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 1   MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 60
           M+ L+ GLQG+PP+ +P GYPF+AGRNNVIACAKHFVGDGGT+KGL+EGNT I SY++LE
Sbjct: 179 MSLLISGLQGEPPEEHPYGYPFLAGRNNVIACAKHFVGDGGTEKGLSEGNT-ITSYEDLE 238

Query: 61  RIHMAPYLDCIAQGVSTV 79
           +IH+APYL+CIAQGVSTV
Sbjct: 239 KIHVAPYLNCIAQGVSTV 255

[Close]

BLAST of MELO3C033200 vs. TAIR 10
Match: AT3G47010.2 (Glycosyl hydrolase family protein )

HSP 1 Score: 131.7 bits (330), Expect = 2.7e-31
Identity = 59/78 (75.64%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 1   MTSLVEGLQGKPPKGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELE 60
           M+ L+ GLQG+PP+ +P GYPF+AGRNNVIACAKHFVGDGGT+KGL+EGNT I SY++LE
Sbjct: 179 MSLLISGLQGEPPEEHPYGYPFLAGRNNVIACAKHFVGDGGTEKGLSEGNT-ITSYEDLE 238

Query: 61  RIHMAPYLDCIAQGVSTV 79
           +IH+APYL+CIAQGVSTV
Sbjct: 239 KIHVAPYLNCIAQGVSTV 255

The following BLAST results are available for this feature:

BLAST of MELO3C033200 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C033200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457398.2	1.3e-38	100.00	PREDICTED: beta-glucosidase BoGH3B-like [Cucumis melo]	[more]
TYJ97332.1	1.3e-38	100.00	beta-glucosidase BoGH3B-like [Cucumis melo var. makuwa]	[more]
KAA0031800.1	1.3e-38	100.00	beta-glucosidase BoGH3B-like [Cucumis melo var. makuwa]	[more]
XP_004150629.2	2.4e-37	96.15	uncharacterized protein LOC101214999 isoform X1 [Cucumis sativus]	[more]
KAE8653276.1	2.4e-37	96.15	hypothetical protein Csa_023195 [Cucumis sativus]	[more]

BLAST of MELO3C033200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BBX9	6.2e-39	100.00	Beta-glucosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001...	[more]
A0A5A7SM16	6.2e-39	100.00	Beta-glucosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G004...	[more]
A0A1S3C6Q1	6.2e-39	100.00	Beta-glucosidase OS=Cucumis melo OX=3656 GN=LOC107990298 PE=3 SV=1	[more]
A0A0A0LXK2	1.2e-37	96.15	Beta-glucosidase OS=Cucumis sativus OX=3659 GN=Csa_1G528540 PE=3 SV=1	[more]
A0A0A0LV38	5.4e-35	94.87	Beta-glucosidase OS=Cucumis sativus OX=3659 GN=Csa_1G528550 PE=3 SV=1	[more]

BLAST of MELO3C033200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47040.1	7.7e-34	78.21	Glycosyl hydrolase family protein	[more]
AT3G47040.2	7.7e-34	78.21	Glycosyl hydrolase family protein	[more]
AT3G47000.1	2.5e-32	78.21	Glycosyl hydrolase family protein	[more]
AT3G47010.1	2.7e-31	75.64	Glycosyl hydrolase family protein	[more]
AT3G47010.2	2.7e-31	75.64	Glycosyl hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001764	Glycoside hydrolase, family 3, N-terminal	PFAM	PF00933	Glyco_hydro_3	coord: 3..78 e-value: 1.6E-8 score: 34.4
IPR036962	Glycoside hydrolase, family 3, N-terminal domain superfamily	GENE3D	3.20.20.300		coord: 1..79 e-value: 2.3E-17 score: 64.9
None	No IPR available	PANTHER	PTHR30620	PERIPLASMIC BETA-GLUCOSIDASE-RELATED	coord: 1..78
None	No IPR available	PANTHER	PTHR30620:SF92	BETA-GLUCOSIDASE BOGH3B-LIKE	coord: 1..78
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 3..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033200.1	MELO3C033200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds