MELO3C033179 (gene) Melon (DHL92) v4

Overview
NameMELO3C033179
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionBeta-amylase
Locationchr08: 9532525 .. 9533801 (+)
RNA-Seq ExpressionMELO3C033179
SyntenyMELO3C033179
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTGACTATTTCTCAAAACTTGAGTTGTCTGCAGGTGGCTTGTCTACTCCATTTCAAGTACAAGCCAAAACGTTTGAATACTTATAAAAAGAATGATCAGTACAAGTCAAAGTGTTCAAGTACTTATAAAAAGAATGGTCCGTAAGAATTAACTTTTATGATCTCAAAATTTTTTTTCTTCATTTTGATCCTGTTGTACTATCATTGTGCTGAAAGTTCGATTGATGTTGTAATCCCACAAACTCTTTTCGAATGTGATCATATCTTTACCTCTGATTTGTGGTTCTATTTTATAGTCACGATATGCTTTCCAGTGCTATGAAGACTTCATATTCCACTTTGTTAAAAATTTTGGTCACTTAGTTGGAGATTTGATACAGGAAAAGCATTGGTCTTGGCCTTTTTGGAGAGCTTAGGTACTTTTATAATAATTATTGATATTTAAACGGGAACTTCAAAGGTGGTGCTTGAGGGCTTATATAAAGGGACCTTTTACAGGTATCCTGCACATCCTTTTGCTGATGGAAGATGGATGTTTCCCAAGATTGGTGAGTTTCATTGCTATGATAAATACATGTAAGTCTGAAGTTTTTTATTTTTCTTGATTTTCAACTAATATAGTCAATCGTCATCTTCAGTTCTCTTATGATTTACTTAAATAGCTATAATGATTGTTGCTTTAGTTAATGTAGTTTATCGAGGAGTGAGTTTTTAGTCTCTTAATTTAATTTATTGATAATGAGAAATGGAAATATTTATGCTAACTCATGTTTTTAATTTCCTTCAAAAAAAAGTTTTGGGTTCTTTTGCATATTCCGATTGTTGCCATCGATCCATCTAACCACCCTCAGACCCTTCCGCATTGCACAATAAAAGTTATGTTTGGTAACCAACCCTTTACTTTATTAATTAGTAATCAAATGTGAATATTTCTACTAGCAACTAGGTCATAACATTGTTACTTAATTGAACCATCTTGATGTCTTTTACAGGGAGCTATCACTAAACAAATGATTGCAATAGAAGAAATGGTTGCAAGTGAGTACAATTAGCCAGACCCTCATCTTTATGACAAGATCTTGAAGTTGGTCATTTGTGAAGCGTTCTAGTTTACTATTAGTTGAAGTTTTAGTTATTGCTCTCTCAATATATTCTTTTTCTTTCTTTTTTTTTTCAAAGGATGATCGGTGTAATAATTAAGCTTCATAATTTCTTTGTGTTAGGAGCCAGTGTTGTATATAAATGTACACATTATTAAGATTTCATTTTGTA

mRNA sequence

ATGGTGGTGACTATTTCTCAAAACTTGAGTTGTCTGCAGGTGGCTTGTCTACTCCATTTCAAGTACAAGCCAAAACGTTTGAATACTTATAAAAAGAATGATCAGTACAAGTCAAAGTGTTCAAGTATCCTGCACATCCTTTTGCTGATGGAAGATGGATGTTTCCCAAGATTGGGAGCTATCACTAAACAAATGATTGCAATAGAAGAAATGGTTGCAAGTGAGTACAATTAGCCAGACCCTCATCTTTATGACAAGATCTTGAAGTTGGTCATTTGTGAAGCGTTCTAGTTTACTATTAGTTGAAGTTTTAGTTATTGCTCTCTCAATATATTCTTTTTCTTTCTTTTTTTTTTCAAAGGATGATCGGTGTAATAATTAAGCTTCATAATTTCTTTGTGTTAGGAGCCAGTGTTGTATATAAATGTACACATTATTAAGATTTCATTTTGTA

Coding sequence (CDS)

ATGGTGGTGACTATTTCTCAAAACTTGAGTTGTCTGCAGGTGGCTTGTCTACTCCATTTCAAGTACAAGCCAAAACGTTTGAATACTTATAAAAAGAATGATCAGTACAAGTCAAAGTGTTCAAGTATCCTGCACATCCTTTTGCTGATGGAAGATGGATGTTTCCCAAGATTGGGAGCTATCACTAAACAAATGATTGCAATAGAAGAAATGGTTGCAAGTGAGTACAATTAG

Protein sequence

MVVTISQNLSCLQVACLLHFKYKPKRLNTYKKNDQYKSKCSSILHILLLMEDGCFPRLGAITKQMIAIEEMVASEYN
Homology
[Close]
BLAST of MELO3C033179 vs. NCBI nr
Match: TYK26663.1 (peptidyl-prolyl cis-trans isomerase CYP21-1 [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 4.4e-06
Identity = 28/32 (87.50%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 11  CLQVACLLHFKYKPKRLNTYKKNDQYKSKCSS 43
           C  VACLLHFKYK KRLNTYKKNDQYKSK SS
Sbjct: 285 CFSVACLLHFKYKSKRLNTYKKNDQYKSKRSS 316

[Close]
BLAST of MELO3C033179 vs. NCBI nr
Match: TYK07944.1 (aspartic proteinase A1-like [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 2.2e-05
Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 11 CLQVACLLHFKYKPKRLNTYKKNDQYKSKCSS 43
          C  VACLL+FKYK KRLNTYKKNDQYKSK SS
Sbjct: 52 CFSVACLLYFKYKSKRLNTYKKNDQYKSKRSS 83

[Close]
BLAST of MELO3C033179 vs. ExPASy TrEMBL
Match: A0A5D3DSU7 (Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003180 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.1e-06
Identity = 28/32 (87.50%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 11  CLQVACLLHFKYKPKRLNTYKKNDQYKSKCSS 43
           C  VACLLHFKYK KRLNTYKKNDQYKSK SS
Sbjct: 285 CFSVACLLHFKYKSKRLNTYKKNDQYKSKRSS 316

[Close]
BLAST of MELO3C033179 vs. ExPASy TrEMBL
Match: A0A5D3C9N6 (Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00610 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-05
Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 11 CLQVACLLHFKYKPKRLNTYKKNDQYKSKCSS 43
          C  VACLL+FKYK KRLNTYKKNDQYKSK SS
Sbjct: 52 CFSVACLLYFKYKSKRLNTYKKNDQYKSKRSS 83

The following BLAST results are available for this feature:
BLAST of MELO3C033179 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK26663.14.4e-0687.50peptidyl-prolyl cis-trans isomerase CYP21-1 [Cucumis melo var. makuwa][more]
TYK07944.12.2e-0584.38aspartic proteinase A1-like [Cucumis melo var. makuwa][more]
BLAST of MELO3C033179 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033179 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DSU72.1e-0687.50Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003180 ... [more]
A0A5D3C9N61.1e-0584.38Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00610 P... [more]
BLAST of MELO3C033179 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033179.1MELO3C033179.1mRNA