Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAAACGACGTAACTCGCCCCATTAACACCATTCTTGATGGTACAAATTATATTACATGGGCACACCAAATGAGAAGTTTTTTGATAGGTCGGAAGTTATGGCGTATTGTTACGGGAGATATCACCAAACCTATCAAACCCACTCCTCCAATGAAAAACACTGGTAATACTGTAAACACTTCTGATGTATTGATCCATGAAACGACTACAGAGGATATTAAATACATTAAAAGATTTGAGGACTGGGATATCAAAAACCATCAAATGATCACCTGGTTAGGTAACACTTCTATTCCAACCATCCATACTCAGTTTGATGCTTTCGATACTGCGAAAGAACTTTGGGATTTTTTGTCTACACATTTTCAGTCTATAGGTATTGCTCATTATTATCAGTTGCATTCTACACTTATTAGTCTAAATCAGGAAGTGGGTCAATCTGTGAATGAATATCTAGCTACTCTTCAGCCCATTTAG
mRNA sequence
ATGGAGAAAAACGACGTAACTCGCCCCATTAACACCATTCTTGATGGTACAAATTATATTACATGGGCACACCAAATGAGAAGTTTTTTGATAGGTCGGAAGTTATGGCGTATTGTTACGGGAGATATCACCAAACCTATCAAACCCACTCCTCCAATGAAAAACACTGGTAATACTGTAAACACTTCTGATGTATTGATCCATGAAACGACTACAGAGGATATTAAATACATTAAAAGATTTGAGGACTGGGATATCAAAAACCATCAAATGATCACCTGGTTAGGTATTGCTCATTATTATCAGTTGCATTCTACACTTATTAGTCTAAATCAGGAAGTGGGTCAATCTGTGAATGAATATCTAGCTACTCTTCAGCCCATTTAG
Coding sequence (CDS)
ATGGAGAAAAACGACGTAACTCGCCCCATTAACACCATTCTTGATGGTACAAATTATATTACATGGGCACACCAAATGAGAAGTTTTTTGATAGGTCGGAAGTTATGGCGTATTGTTACGGGAGATATCACCAAACCTATCAAACCCACTCCTCCAATGAAAAACACTGGTAATACTGTAAACACTTCTGATGTATTGATCCATGAAACGACTACAGAGGATATTAAATACATTAAAAGATTTGAGGACTGGGATATCAAAAACCATCAAATGATCACCTGGTTAGGTATTGCTCATTATTATCAGTTGCATTCTACACTTATTAGTCTAAATCAGGAAGTGGGTCAATCTGTGAATGAATATCTAGCTACTCTTCAGCCCATTTAG
Protein sequence
MEKNDVTRPINTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPIKPTPPMKNTGNTVNTSDVLIHETTTEDIKYIKRFEDWDIKNHQMITWLGIAHYYQLHSTLISLNQEVGQSVNEYLATLQPI
Homology
BLAST of MELO3C033139 vs. NCBI nr
Match:
XP_016901896.1 (PREDICTED: uncharacterized protein LOC107991463 [Cucumis melo])
HSP 1 Score: 215.3 bits (547), Expect = 3.0e-52
Identity = 110/160 (68.75%), Postives = 118/160 (73.75%), Query Frame = 0
Query: 1 MEKNDVTRPINTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPIKPTPPMKNTGNTV 60
M+KN+V R I+TILDGTNYITWAH MRSFLIGRKLWRIVTGDITKPIKPT PMKN NT
Sbjct: 1 MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVTGDITKPIKPTTPMKNIDNTA 60
Query: 61 NTSDVLIHETTTEDIKYIKRFEDWDIKNHQMITWL------------------------- 120
NTSDVLIHETT EDIKYI+R EDWD KNHQ+ITWL
Sbjct: 61 NTSDVLIHETTAEDIKYIERLEDWDSKNHQIITWLGNTSIPAIHTQLDSFDTAKELWDFL 120
Query: 121 -------GIAHYYQLHSTLISLNQEVGQSVNEYLATLQPI 129
G+AHYYQL+STLI+LNQEVGQSVNEYLATLQPI
Sbjct: 121 ATRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPI 160
BLAST of MELO3C033139 vs. NCBI nr
Match:
KAA0047794.1 (putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 207.2 bits (526), Expect = 8.3e-50
Identity = 105/166 (63.25%), Postives = 116/166 (69.88%), Query Frame = 0
Query: 1 MEKNDVTRPINTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPIKPTPPMKNTG--- 60
MEKN V RPI+TILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKP+KPT PMKNT
Sbjct: 1 MEKNYVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPTFPMKNTSKNN 60
Query: 61 ---NTVNTSDVLIHETTTEDIKYIKRFEDWDIKNHQMITWL------------------- 120
N NTSD+++HE T EDI+YI+R EDWD KNHQ+ITWL
Sbjct: 61 TEHNDANTSDIIVHEPTVEDIQYIERLEDWDSKNHQIITWLGNTSIPAIHTQFDTFDSAK 120
Query: 121 -------------GIAHYYQLHSTLISLNQEVGQSVNEYLATLQPI 129
G+AHYYQLHSTL++LNQEVGQSVNEYL T QPI
Sbjct: 121 ELWNFLYTRFQSIGLAHYYQLHSTLVNLNQEVGQSVNEYLVTFQPI 166
BLAST of MELO3C033139 vs. NCBI nr
Match:
KAA0065380.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 206.1 bits (523), Expect = 1.8e-49
Identity = 97/128 (75.78%), Postives = 108/128 (84.38%), Query Frame = 0
Query: 1 MEKNDVTRPINTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPIKPTPPMKNTGNTV 60
MEKNDV RPI+TILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKP+KP
Sbjct: 1 MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKP----------- 60
Query: 61 NTSDVLIHETTTEDIKYIKRFEDWDIKNHQMITWLGIAHYYQLHSTLISLNQEVGQSVNE 120
++HET+ EDI+YI+R EDWD KNHQ+ITWLG+AHYYQLHSTL+SLNQE+GQSVNE
Sbjct: 61 -----IVHETSAEDIQYIERLEDWDSKNHQIITWLGLAHYYQLHSTLVSLNQEMGQSVNE 112
Query: 121 YLATLQPI 129
YLATLQPI
Sbjct: 121 YLATLQPI 112
BLAST of MELO3C033139 vs. NCBI nr
Match:
KAA0045094.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYJ96233.1 putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 205.7 bits (522), Expect = 2.4e-49
Identity = 104/147 (70.75%), Postives = 115/147 (78.23%), Query Frame = 0
Query: 1 MEKNDVTRPINTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPIKPTPPMKNTG--- 60
MEK D+ RPI+TILDG+NYITWA+QMRSFLIGRKLWRIVTGDITKPIKPTPP+KNT
Sbjct: 1 MEKGDIARPISTILDGSNYITWANQMRSFLIGRKLWRIVTGDITKPIKPTPPVKNTSKNN 60
Query: 61 ---NTVNTSDVLIHETTTEDIKYIKRFEDWDIKNHQMITWL-------------GIAHYY 120
N NTSD ETT ED KYI+R EDWD KNHQ+ITWL G+AHYY
Sbjct: 61 TEHNDANTSD----ETTAEDTKYIERLEDWDSKNHQIITWLELWDFLYPRFQSIGLAHYY 120
Query: 121 QLHSTLISLNQEVGQSVNEYLATLQPI 129
QLHSTL++LNQEVGQSVN+YLATLQPI
Sbjct: 121 QLHSTLVNLNQEVGQSVNKYLATLQPI 143
BLAST of MELO3C033139 vs. NCBI nr
Match:
XP_008450155.1 (PREDICTED: uncharacterized protein LOC103491828 [Cucumis melo])
HSP 1 Score: 205.7 bits (522), Expect = 2.4e-49
Identity = 104/147 (70.75%), Postives = 115/147 (78.23%), Query Frame = 0
Query: 1 MEKNDVTRPINTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPIKPTPPMKNTG--- 60
MEK D+ RPI+TILDG+NYITWA+QMRSFLIGRKLWRIVTGDITKPIKPTPP+KNT
Sbjct: 1 MEKGDIARPISTILDGSNYITWANQMRSFLIGRKLWRIVTGDITKPIKPTPPVKNTSKNN 60
Query: 61 ---NTVNTSDVLIHETTTEDIKYIKRFEDWDIKNHQMITWL-------------GIAHYY 120
N NTSD ETT ED KYI+R EDWD KNHQ+ITWL G+AHYY
Sbjct: 61 TEHNDANTSD----ETTAEDTKYIERLEDWDSKNHQIITWLELWDFLYPRFQSIGLAHYY 120
Query: 121 QLHSTLISLNQEVGQSVNEYLATLQPI 129
QLHSTL++LNQEVGQSVN+YLATLQPI
Sbjct: 121 QLHSTLVNLNQEVGQSVNKYLATLQPI 143
BLAST of MELO3C033139 vs. ExPASy TrEMBL
Match:
A0A1S4E0Y9 (uncharacterized protein LOC107991463 OS=Cucumis melo OX=3656 GN=LOC107991463 PE=4 SV=1)
HSP 1 Score: 215.3 bits (547), Expect = 1.5e-52
Identity = 110/160 (68.75%), Postives = 118/160 (73.75%), Query Frame = 0
Query: 1 MEKNDVTRPINTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPIKPTPPMKNTGNTV 60
M+KN+V R I+TILDGTNYITWAH MRSFLIGRKLWRIVTGDITKPIKPT PMKN NT
Sbjct: 1 MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVTGDITKPIKPTTPMKNIDNTA 60
Query: 61 NTSDVLIHETTTEDIKYIKRFEDWDIKNHQMITWL------------------------- 120
NTSDVLIHETT EDIKYI+R EDWD KNHQ+ITWL
Sbjct: 61 NTSDVLIHETTAEDIKYIERLEDWDSKNHQIITWLGNTSIPAIHTQLDSFDTAKELWDFL 120
Query: 121 -------GIAHYYQLHSTLISLNQEVGQSVNEYLATLQPI 129
G+AHYYQL+STLI+LNQEVGQSVNEYLATLQPI
Sbjct: 121 ATRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPI 160
BLAST of MELO3C033139 vs. ExPASy TrEMBL
Match:
A0A5A7TXR0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00330 PE=4 SV=1)
HSP 1 Score: 207.2 bits (526), Expect = 4.0e-50
Identity = 105/166 (63.25%), Postives = 116/166 (69.88%), Query Frame = 0
Query: 1 MEKNDVTRPINTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPIKPTPPMKNTG--- 60
MEKN V RPI+TILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKP+KPT PMKNT
Sbjct: 1 MEKNYVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPTFPMKNTSKNN 60
Query: 61 ---NTVNTSDVLIHETTTEDIKYIKRFEDWDIKNHQMITWL------------------- 120
N NTSD+++HE T EDI+YI+R EDWD KNHQ+ITWL
Sbjct: 61 TEHNDANTSDIIVHEPTVEDIQYIERLEDWDSKNHQIITWLGNTSIPAIHTQFDTFDSAK 120
Query: 121 -------------GIAHYYQLHSTLISLNQEVGQSVNEYLATLQPI 129
G+AHYYQLHSTL++LNQEVGQSVNEYL T QPI
Sbjct: 121 ELWNFLYTRFQSIGLAHYYQLHSTLVNLNQEVGQSVNEYLVTFQPI 166
BLAST of MELO3C033139 vs. ExPASy TrEMBL
Match:
A0A5A7VDW0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00430 PE=4 SV=1)
HSP 1 Score: 206.1 bits (523), Expect = 8.9e-50
Identity = 97/128 (75.78%), Postives = 108/128 (84.38%), Query Frame = 0
Query: 1 MEKNDVTRPINTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPIKPTPPMKNTGNTV 60
MEKNDV RPI+TILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKP+KP
Sbjct: 1 MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKP----------- 60
Query: 61 NTSDVLIHETTTEDIKYIKRFEDWDIKNHQMITWLGIAHYYQLHSTLISLNQEVGQSVNE 120
++HET+ EDI+YI+R EDWD KNHQ+ITWLG+AHYYQLHSTL+SLNQE+GQSVNE
Sbjct: 61 -----IVHETSAEDIQYIERLEDWDSKNHQIITWLGLAHYYQLHSTLVSLNQEMGQSVNE 112
Query: 121 YLATLQPI 129
YLATLQPI
Sbjct: 121 YLATLQPI 112
BLAST of MELO3C033139 vs. ExPASy TrEMBL
Match:
A0A5A7TPN5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00220 PE=4 SV=1)
HSP 1 Score: 205.7 bits (522), Expect = 1.2e-49
Identity = 104/147 (70.75%), Postives = 115/147 (78.23%), Query Frame = 0
Query: 1 MEKNDVTRPINTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPIKPTPPMKNTG--- 60
MEK D+ RPI+TILDG+NYITWA+QMRSFLIGRKLWRIVTGDITKPIKPTPP+KNT
Sbjct: 1 MEKGDIARPISTILDGSNYITWANQMRSFLIGRKLWRIVTGDITKPIKPTPPVKNTSKNN 60
Query: 61 ---NTVNTSDVLIHETTTEDIKYIKRFEDWDIKNHQMITWL-------------GIAHYY 120
N NTSD ETT ED KYI+R EDWD KNHQ+ITWL G+AHYY
Sbjct: 61 TEHNDANTSD----ETTAEDTKYIERLEDWDSKNHQIITWLELWDFLYPRFQSIGLAHYY 120
Query: 121 QLHSTLISLNQEVGQSVNEYLATLQPI 129
QLHSTL++LNQEVGQSVN+YLATLQPI
Sbjct: 121 QLHSTLVNLNQEVGQSVNKYLATLQPI 143
BLAST of MELO3C033139 vs. ExPASy TrEMBL
Match:
A0A1S3BPL0 (uncharacterized protein LOC103491828 OS=Cucumis melo OX=3656 GN=LOC103491828 PE=4 SV=1)
HSP 1 Score: 205.7 bits (522), Expect = 1.2e-49
Identity = 104/147 (70.75%), Postives = 115/147 (78.23%), Query Frame = 0
Query: 1 MEKNDVTRPINTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPIKPTPPMKNTG--- 60
MEK D+ RPI+TILDG+NYITWA+QMRSFLIGRKLWRIVTGDITKPIKPTPP+KNT
Sbjct: 1 MEKGDIARPISTILDGSNYITWANQMRSFLIGRKLWRIVTGDITKPIKPTPPVKNTSKNN 60
Query: 61 ---NTVNTSDVLIHETTTEDIKYIKRFEDWDIKNHQMITWL-------------GIAHYY 120
N NTSD ETT ED KYI+R EDWD KNHQ+ITWL G+AHYY
Sbjct: 61 TEHNDANTSD----ETTAEDTKYIERLEDWDSKNHQIITWLELWDFLYPRFQSIGLAHYY 120
Query: 121 QLHSTLISLNQEVGQSVNEYLATLQPI 129
QLHSTL++LNQEVGQSVN+YLATLQPI
Sbjct: 121 QLHSTLVNLNQEVGQSVNKYLATLQPI 143
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_016901896.1 | 3.0e-52 | 68.75 | PREDICTED: uncharacterized protein LOC107991463 [Cucumis melo] | [more] |
| KAA0047794.1 | 8.3e-50 | 63.25 | putative mitochondrial protein [Cucumis melo var. makuwa] | [more] |
| KAA0065380.1 | 1.8e-49 | 75.78 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
| KAA0045094.1 | 2.4e-49 | 70.75 | putative mitochondrial protein [Cucumis melo var. makuwa] >TYJ96233.1 putative m... | [more] |
| XP_008450155.1 | 2.4e-49 | 70.75 | PREDICTED: uncharacterized protein LOC103491828 [Cucumis melo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S4E0Y9 | 1.5e-52 | 68.75 | uncharacterized protein LOC107991463 OS=Cucumis melo OX=3656 GN=LOC107991463 PE=... | [more] |
| A0A5A7TXR0 | 4.0e-50 | 63.25 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... | [more] |
| A0A5A7VDW0 | 8.9e-50 | 75.78 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
| A0A5A7TPN5 | 1.2e-49 | 70.75 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
| A0A1S3BPL0 | 1.2e-49 | 70.75 | uncharacterized protein LOC103491828 OS=Cucumis melo OX=3656 GN=LOC103491828 PE=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
