MELO3C033128 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033128
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	50S ribosomal protein L18
Location	chr08: 25794849 .. 25795238 (+)
RNA-Seq Expression	MELO3C033128
Synteny	MELO3C033128

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGTATTAAAGCGCTATGTGTTGCGATTATTCATATCTTTGAAGTACATAACAGCGAATGTGGTAGATAGAAATAATGGACGAGTTGTCGCAACTGCATCCACGGTGGAACACTCCATCAAAAACTCACTTGAATGTGGTCGGTCTTGTAACGCGAAGGCAGCAGCAATTGTTGGAGAGGTGTTGGCTATGCGACTCAAAGTTGACGGTCTCGAACAGGGGCAAGGAAGAGGGATTCACGCGGACATAAACAAAGAAATTGAGAAGAAAGGCTTCAGAAACCGCACAAAAATCTGGGCTATAGTGAATTCACTAAAGAATAACGGAGTTAAACTCATTCTCAACAACAATGTCGACGACGATGCAGCTCAATCGAACTACCAATAA

mRNA sequence

ATGACAGTATTAAAGCGCTATGTGTTGCGATTATTCATATCTTTGAAGTACATAACAGCGAATGTGGTAGATAGAAATAATGGACGAGTTGTCGCAACTGCATCCACGGTGGAACACTCCATCAAAAACTCACTTGAATGTGGTCGGTCTTGTAACGCGAAGGCAGCAGCAATTGTTGGAGAGGTGTTGGCTATGCGACTCAAAGTTGACGGTCTCGAACAGGGGCAAGGAAGAGGGATTCACGCGGACATAAACAAAGAAATTGAGAAGAAAGGCTTCAGAAACCGCACAAAAATCTGGGCTATAGTGAATTCACTAAAGAATAACGGAGTTAAACTCATTCTCAACAACAATGTCGACGACGATGCAGCTCAATCGAACTACCAATAA

Coding sequence (CDS)

ATGACAGTATTAAAGCGCTATGTGTTGCGATTATTCATATCTTTGAAGTACATAACAGCGAATGTGGTAGATAGAAATAATGGACGAGTTGTCGCAACTGCATCCACGGTGGAACACTCCATCAAAAACTCACTTGAATGTGGTCGGTCTTGTAACGCGAAGGCAGCAGCAATTGTTGGAGAGGTGTTGGCTATGCGACTCAAAGTTGACGGTCTCGAACAGGGGCAAGGAAGAGGGATTCACGCGGACATAAACAAAGAAATTGAGAAGAAAGGCTTCAGAAACCGCACAAAAATCTGGGCTATAGTGAATTCACTAAAGAATAACGGAGTTAAACTCATTCTCAACAACAATGTCGACGACGATGCAGCTCAATCGAACTACCAATAA

Protein sequence

MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVDDDAAQSNYQ

Homology

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BLAST of MELO3C033128 vs. NCBI nr
Match: XP_016902998.1 (PREDICTED: uncharacterized protein LOC103501501 [Cucumis melo] >KAA0025753.1 50S ribosomal protein L18 [Cucumis melo var. makuwa])

HSP 1 Score: 249.2 bits (635), Expect = 1.9e-62
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60
           MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG
Sbjct: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD 120
           EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD 120

Query: 121 DDAAQSNYQ 130
           DDAAQSNYQ
Sbjct: 121 DDAAQSNYQ 129

[Close]

BLAST of MELO3C033128 vs. NCBI nr
Match: TYK06187.1 (50S ribosomal protein L18 [Cucumis melo var. makuwa])

HSP 1 Score: 247.3 bits (630), Expect = 7.3e-62
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60
           MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG
Sbjct: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD 120
           EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLIL+NNVD
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILDNNVD 120

Query: 121 DDAAQSNYQ 130
           DDAAQSNYQ
Sbjct: 121 DDAAQSNYQ 129

[Close]

BLAST of MELO3C033128 vs. NCBI nr
Match: XP_011653002.1 (uncharacterized protein LOC101206481 [Cucumis sativus] >XP_031740754.1 uncharacterized protein LOC101206481 [Cucumis sativus] >XP_031740755.1 uncharacterized protein LOC101206481 [Cucumis sativus] >KAE8649072.1 hypothetical protein Csa_014803 [Cucumis sativus])

HSP 1 Score: 238.0 bits (606), Expect = 4.4e-59
Identity = 122/129 (94.57%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60
           MT+LKRYVLRLF+SLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG
Sbjct: 1   MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD 120
           EVLAMRLKVDGLEQGQGRGIHADI KEIEKKGF+N TKIWAIVNSLKNNGVKLIL+NNVD
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIVNSLKNNGVKLILDNNVD 120

Query: 121 DDAAQSNYQ 130
           D+AAQSNYQ
Sbjct: 121 DNAAQSNYQ 129

[Close]

BLAST of MELO3C033128 vs. NCBI nr
Match: XP_038901007.1 (uncharacterized protein LOC120088052 [Benincasa hispida] >XP_038901008.1 uncharacterized protein LOC120088052 [Benincasa hispida] >XP_038901009.1 uncharacterized protein LOC120088052 [Benincasa hispida])

HSP 1 Score: 229.9 bits (585), Expect = 1.2e-56
Identity = 118/129 (91.47%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60
           MTVLKRYVLRLFISLKYITANVVDRNNGR+VATASTVEHSIK SLECGRSCNAKAAA+VG
Sbjct: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD 120
           EVLAMRLKVDGLEQGQGRGIHAD+NKEIEKKGF+NRTKIWAIVN+LKNNGVKLIL+NNV 
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGVKLILDNNV- 120

Query: 121 DDAAQSNYQ 130
           DDA++S+YQ
Sbjct: 121 DDASRSSYQ 128

[Close]

BLAST of MELO3C033128 vs. NCBI nr
Match: XP_022943852.1 (uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943853.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943854.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943855.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943856.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943857.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943858.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943860.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >KAG7010651.1 rplR, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226.1 bits (575), Expect = 1.7e-55
Identity = 116/129 (89.92%), Postives = 125/129 (96.90%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60
           MTVLKRYV+RLFISLKYITANVVDRNNGR+VATASTVEHSIK SLECGRSCNAKAAA+VG
Sbjct: 1   MTVLKRYVVRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD 120
           EVLAMRLKVDGLEQGQGRGIH DINKEIEKKGF+NRTKIWAIVNSLKNNGVKLIL+NN D
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHMDINKEIEKKGFKNRTKIWAIVNSLKNNGVKLILDNN-D 120

Query: 121 DDAAQSNYQ 130
           DDA++ +Y+
Sbjct: 121 DDASRPSYE 128

[Close]

BLAST of MELO3C033128 vs. ExPASy Swiss-Prot
Match: Q5P316 (50S ribosomal protein L18 OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=rplR PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.9e-04
Identity = 33/109 (30.28%), Postives = 57/109 (52.29%), Query Frame = 0


Query: 4   LKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVL 63
           LK   L +F +  +I A V+D +  RV+A ASTVE  +++ L  G   N +AA +VG+++
Sbjct: 21  LKSVRLTVFRTNSHIYAQVIDGSGSRVLAAASTVEADVRSQLPNGG--NKQAAQVVGKLI 80

Query: 64  AMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVK 113
           A R K  G+E               ++ GF+   ++ A+  + +  G+K
Sbjct: 81  AERAKAAGVEA-----------VAFDRAGFQYHGRVKALAEAAREGGLK 116

[Close]

BLAST of MELO3C033128 vs. ExPASy Swiss-Prot
Match: Q5F5U3 (50S ribosomal protein L18 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) OX=242231 GN=rplR PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.5e-04
Identity = 33/108 (30.56%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 4   LKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVL 63
           LK   L +F S  +I A V+     +V+A AST+E  ++ SL+ G   N +AAAIVG+ +
Sbjct: 21  LKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSG--SNVEAAAIVGKRI 80

Query: 64  AMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGV 112
           A + K  G+E+              ++ GF+   ++ A+  + + NG+
Sbjct: 81  AEKAKAAGVEK-----------VAFDRSGFQYHGRVKALAEAARENGL 115

[Close]

BLAST of MELO3C033128 vs. ExPASy Swiss-Prot
Match: A9M3V0 (50S ribosomal protein L18 OS=Neisseria meningitidis serogroup C (strain 053442) OX=374833 GN=rplR PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.5e-04
Identity = 33/108 (30.56%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 4   LKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVL 63
           LK   L +F S  +I A V+     +V+A AST+E  ++ SL+ G   N +AAAIVG+ +
Sbjct: 21  LKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSG--SNVEAAAIVGKRI 80

Query: 64  AMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGV 112
           A + K  G+E+              ++ GF+   ++ A+  + + NG+
Sbjct: 81  AEKAKAAGVEK-----------VAFDRSGFQYHGRVKALAEAARENGL 115

[Close]

BLAST of MELO3C033128 vs. ExPASy Swiss-Prot
Match: Q9JQQ6 (50S ribosomal protein L18 OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=rplR PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.5e-04
Identity = 33/108 (30.56%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 4   LKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVL 63
           LK   L +F S  +I A V+     +V+A AST+E  ++ SL+ G   N +AAAIVG+ +
Sbjct: 21  LKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSG--SNVEAAAIVGKRI 80

Query: 64  AMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGV 112
           A + K  G+E+              ++ GF+   ++ A+  + + NG+
Sbjct: 81  AEKAKAAGVEK-----------VAFDRSGFQYHGRVKALAEAARENGL 115

[Close]

BLAST of MELO3C033128 vs. ExPASy Swiss-Prot
Match: Q7DDT0 (50S ribosomal protein L18 OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=rplR PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.5e-04
Identity = 33/108 (30.56%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 4   LKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVL 63
           LK   L +F S  +I A V+     +V+A AST+E  ++ SL+ G   N +AAAIVG+ +
Sbjct: 21  LKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSG--SNVEAAAIVGKRI 80

Query: 64  AMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGV 112
           A + K  G+E+              ++ GF+   ++ A+  + + NG+
Sbjct: 81  AEKAKAAGVEK-----------VAFDRSGFQYHGRVKALAEAARENGL 115

[Close]

BLAST of MELO3C033128 vs. ExPASy TrEMBL
Match: A0A5A7SM55 (50S ribosomal protein L18 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold653G00440 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 9.3e-63
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60
           MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG
Sbjct: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD 120
           EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD 120

Query: 121 DDAAQSNYQ 130
           DDAAQSNYQ
Sbjct: 121 DDAAQSNYQ 129

[Close]

BLAST of MELO3C033128 vs. ExPASy TrEMBL
Match: A0A1S4E442 (uncharacterized protein LOC103501501 OS=Cucumis melo OX=3656 GN=LOC103501501 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 9.3e-63
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60
           MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG
Sbjct: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD 120
           EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD 120

Query: 121 DDAAQSNYQ 130
           DDAAQSNYQ
Sbjct: 121 DDAAQSNYQ 129

[Close]

BLAST of MELO3C033128 vs. ExPASy TrEMBL
Match: A0A5D3C2Z2 (50S ribosomal protein L18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00440 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.5e-62
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60
           MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG
Sbjct: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD 120
           EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLIL+NNVD
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILDNNVD 120

Query: 121 DDAAQSNYQ 130
           DDAAQSNYQ
Sbjct: 121 DDAAQSNYQ 129

[Close]

BLAST of MELO3C033128 vs. ExPASy TrEMBL
Match: A0A0A0KX15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G007080 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.1e-59
Identity = 122/129 (94.57%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60
           MT+LKRYVLRLF+SLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG
Sbjct: 92  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 151

Query: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD 120
           EVLAMRLKVDGLEQGQGRGIHADI KEIEKKGF+N TKIWAIVNSLKNNGVKLIL+NNVD
Sbjct: 152 EVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIVNSLKNNGVKLILDNNVD 211

Query: 121 DDAAQSNYQ 130
           D+AAQSNYQ
Sbjct: 212 DNAAQSNYQ 220

[Close]

BLAST of MELO3C033128 vs. ExPASy TrEMBL
Match: A0A6J1FXG0 (uncharacterized protein LOC111448460 OS=Cucurbita moschata OX=3662 GN=LOC111448460 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 8.4e-56
Identity = 116/129 (89.92%), Postives = 125/129 (96.90%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60
           MTVLKRYV+RLFISLKYITANVVDRNNGR+VATASTVEHSIK SLECGRSCNAKAAA+VG
Sbjct: 1   MTVLKRYVVRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD 120
           EVLAMRLKVDGLEQGQGRGIH DINKEIEKKGF+NRTKIWAIVNSLKNNGVKLIL+NN D
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHMDINKEIEKKGFKNRTKIWAIVNSLKNNGVKLILDNN-D 120

Query: 121 DDAAQSNYQ 130
           DDA++ +Y+
Sbjct: 121 DDASRPSYE 128

[Close]

BLAST of MELO3C033128 vs. TAIR 10
Match: AT3G45020.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 206.1 bits (523), Expect = 1.7e-53
Identity = 100/122 (81.97%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60
           MTVLKRYVLRLF+S+KYITANVVDRNNGR+V TASTVEH+IKNSLECGR+CNAKAAAIVG
Sbjct: 1   MTVLKRYVLRLFMSIKYITANVVDRNNGRIVTTASTVEHTIKNSLECGRTCNAKAAAIVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD 120
           EVLAMRLKV+GL+ GQGRGIHAD+ KEIEKKGF++RTK+WA++NSL+NNGV LIL+++ D
Sbjct: 61  EVLAMRLKVEGLQDGQGRGIHADVKKEIEKKGFKSRTKVWAVINSLRNNGVTLILDDDDD 120

Query: 121 DD 123
           DD
Sbjct: 121 DD 122

[Close]

BLAST of MELO3C033128 vs. TAIR 10
Match: AT5G27820.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 41.2 bits (95), Expect = 7.4e-04
Identity = 29/111 (26.13%), Postives = 59/111 (53.15%), Query Frame = 0


Query: 4   LKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVL 63
           LK YVL++  + K++ A V+      V  +AS+ E +++ +++  R  +  AA+ +G++L
Sbjct: 16  LKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALRETMDITR--DVAAASKIGKIL 75

Query: 64  AMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLI 115
             RL +  +       +   + KE    G     K+ A+++S++  GVKL+
Sbjct: 76  GERLLMKDIP-----AVTIQMKKEQRYHG-----KVKAVIDSVREAGVKLL 114

The following BLAST results are available for this feature:

BLAST of MELO3C033128 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902998.1	1.9e-62	100.00	PREDICTED: uncharacterized protein LOC103501501 [Cucumis melo] >KAA0025753.1 50S...	[more]
TYK06187.1	7.3e-62	99.22	50S ribosomal protein L18 [Cucumis melo var. makuwa]	[more]
XP_011653002.1	4.4e-59	94.57	uncharacterized protein LOC101206481 [Cucumis sativus] >XP_031740754.1 uncharact...	[more]
XP_038901007.1	1.2e-56	91.47	uncharacterized protein LOC120088052 [Benincasa hispida] >XP_038901008.1 unchara...	[more]
XP_022943852.1	1.7e-55	89.92	uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943853.1 unchar...	[more]

BLAST of MELO3C033128 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5P316	1.9e-04	30.28	50S ribosomal protein L18 OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=rp...	[more]
Q5F5U3	2.5e-04	30.56	50S ribosomal protein L18 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090...	[more]
A9M3V0	2.5e-04	30.56	50S ribosomal protein L18 OS=Neisseria meningitidis serogroup C (strain 053442) ...	[more]
Q9JQQ6	2.5e-04	30.56	50S ribosomal protein L18 OS=Neisseria meningitidis serogroup A / serotype 4A (s...	[more]
Q7DDT0	2.5e-04	30.56	50S ribosomal protein L18 OS=Neisseria meningitidis serogroup B (strain MC58) OX...	[more]

BLAST of MELO3C033128 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SM55	9.3e-63	100.00	50S ribosomal protein L18 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S4E442	9.3e-63	100.00	uncharacterized protein LOC103501501 OS=Cucumis melo OX=3656 GN=LOC103501501 PE=...	[more]
A0A5D3C2Z2	3.5e-62	99.22	50S ribosomal protein L18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0KX15	2.1e-59	94.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G007080 PE=4 SV=1	[more]
A0A6J1FXG0	8.4e-56	89.92	uncharacterized protein LOC111448460 OS=Cucurbita moschata OX=3662 GN=LOC1114484...	[more]

BLAST of MELO3C033128 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45020.1	1.7e-53	81.97	Ribosomal L18p/L5e family protein	[more]
AT5G27820.1	7.4e-04	26.13	Ribosomal L18p/L5e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005484	Ribosomal protein L18	PFAM	PF00861	Ribosomal_L18p	coord: 5..74 e-value: 1.7E-8 score: 34.8
IPR005484	Ribosomal protein L18	PANTHER	PTHR12899	39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL	coord: 1..123
None	No IPR available	GENE3D	3.30.420.100		coord: 1..113 e-value: 6.2E-19 score: 70.5
None	No IPR available	PANTHER	PTHR12899:SF12	OS09G0549700 PROTEIN	coord: 1..123
None	No IPR available	CDD	cd00432	Ribosomal_L18_L5e	coord: 5..111 e-value: 4.07682E-16 score: 66.7947
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 4..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033128.1	MELO3C033128.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome