MELO3C033126 (gene) Melon (DHL92) v4

Overview
NameMELO3C033126
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Locationchr03: 20930855 .. 20932242 (+)
RNA-Seq ExpressionMELO3C033126
SyntenyMELO3C033126
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGTATGCTAAATGATTTACAAGCTCCCGTTGAGCATGAAGAGGAAATAGAGTTATGTCGTTTGGAAGATGAAATGGCGATGAATGTTGGGGTAGATATAGATGAAGATAGAACAAACAATATATATCAGGACTTATTGAATGAAGCACGTAATGAGTTATACCCCGGTTGTTCTGAATTTTCATCGTTGAATTTGTTGGTTAAGTTGATGCATGTGAAGATTCTAAATGGTTGGAGTAACAAGTTGTTCGACATGTTGTTAGAACTCTTAAGAGCAGCGTTTCCAATGTGTAGTAATACTATCCTTAGTTCATTTTATGAAGCAAAACAAAAACTTCGTGACTTGGGCTTGGGATACGGAACTATTCATGCGTGTAAGTTTTTGGTATGCGAAGGAACCTGTAATTTCTACGGTGTTCTAGACGAAGTGTTGCACGTACAATATCCGTTGGAAATAAATGTATGGCTATTTAAATGTCGGTGGTATGACACCGACGTAAACAAAAGTCAAAGAACACACGTTGAAGTAGGGTACAAATCTCTCAACACGTCCCATTTTTGTTACGCGAAGGAACCTGTAATTCTTACGACTCAAGCACATCAAGTTTTTTATGTTGATGACCCAAAATATGGTAACAATTGGAAAGTTGTGCAAGTCATCCAAAATAAGCGTATATGGGATGTGCCAGAAGTGGAGGATGTTGAGAATGAGCACATTAACATACTAGAAGTTGTTGTAAGCCATCAAGTGGATGACCACATCGAGGATGACACTCTGTGTAGAATTTATGTTGATCCCATGATCGTTGAAAGACCGATTGTTCGTCATGTCACTGATGACTTCATCGACGATGTGGATGAACACTTGTCACATGCAAGCGACGACGACGAATTATAGTGACAAACCACATACCCACATATTTATGTAGTTTATATATTTTGATTCTATGTGTTCGTATTTGCTTATTCAATGTTTGTTTTCTATGTCCACAGGCATTATGTCATCGTCATATCCACGTCATAGTTTTATGGAGACAGACGCTATGTTCCTCAAATTTGAGGACGAGTTAAATAACTTTGCGGGAGGGTCATTGTCCGTGGGCGACAATGCGGGTGAGTATAAGAATTTCTTTCATTTTAACTTACGATTATTTCATGTTTTTTCTAACATTATATTGTGCAAGGTCATCTTCTCAACAACCTGAGACTCCAACTCCTAGAAGACGTGCTCAGTTTTGACTCTTAGAGTTTGGGCGTCACGTTGCAGTACATGAGCGCATTCCGATGACAATTGCCCCTGGTGCGGAGAAACCTATTTCCCCACATGTCGTTCGCTTCAGCTAGGCGATAGGCGTATGCGTGCGAAAGGATTTCCTGTTCGCT

mRNA sequence

ATGTTTGGTATGCTAAATGATTTACAAGCTCCCGTTGAGCATGAAGAGGAAATAGAGTTATGTCGTTTGGAAGATGAAATGGCGATGAATGTTGGGGTAGATATAGATGAAGATAGAACAAACAATATATTGACAAACCACATACCCACATATTTATGTAGTTTATATATTTTGATTCTATGTGTTCGTATTTGCTTATTCAATGTTTGTTTTCTATGTCCACAGGCATTATGTCATCGTCATATCCACGTCATAGTTTTATGGAGACAGACGCTATGTTCCTCAAATTTGAGGACGAGTTAAATAACTTTGCGGGAGGGTCATTGTCCGTGGGCGACAATGCGGGTGAGTAGTTTGGGCGTCACGTTGCAGTACATGAGCGCATTCCGATGACAATTGCCCCTGGTGCGGAGAAACCTATTTCCCCACATGTCGTTCGCTTCAGCTAGGCGATAGGCGTATGCGTGCGAAAGGATTTCCTGTTCGCT

Coding sequence (CDS)

ATGTTTGGTATGCTAAATGATTTACAAGCTCCCGTTGAGCATGAAGAGGAAATAGAGTTATGTCGTTTGGAAGATGAAATGGCGATGAATGTTGGGGTAGATATAGATGAAGATAGAACAAACAATATATTGACAAACCACATACCCACATATTTATGTAGTTTATATATTTTGATTCTATGTGTTCGTATTTGCTTATTCAATGTTTGTTTTCTATGTCCACAGGCATTATGTCATCGTCATATCCACGTCATAGTTTTATGGAGACAGACGCTATGTTCCTCAAATTTGAGGACGAGTTAA

Protein sequence

MFGMLNDLQAPVEHEEEIELCRLEDEMAMNVGVDIDEDRTNNILTNHIPTYLCSLYILILCVRICLFNVCFLCPQALCHRHIHVIVLWRQTLCSSNLRTS
Homology
[Close]
BLAST of MELO3C033126 vs. NCBI nr
Match: TYK11771.1 (uncharacterized protein E5676_scaffold304G00980 [Cucumis melo var. makuwa])

HSP 1 Score: 90.5 bits (223), Expect = 8.8e-15
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 0 

Query: 1   MFGMLNDLQAPVEHEEEIELCRLEDEMAMNVGVDIDEDRTNNI 44
           MFGMLNDLQAPVEHEEEIELCRLEDEMAMNVGVDIDEDRTNNI
Sbjct: 273 MFGMLNDLQAPVEHEEEIELCRLEDEMAMNVGVDIDEDRTNNI 315

[Close]
BLAST of MELO3C033126 vs. NCBI nr
Match: KAA0040862.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 5.9e-11
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 0 

Query: 1  MFGMLNDLQAPVEHEEEIELCRLEDEMAMNVGVDIDEDRTNNI 44
          MFGMLNDLQAP+EHEEE E  RLEDE+ MNVG+DIDEDRTNNI
Sbjct: 1  MFGMLNDLQAPIEHEEETEELRLEDEIPMNVGIDIDEDRTNNI 43

[Close]
BLAST of MELO3C033126 vs. NCBI nr
Match: TYK18968.1 (uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 7.7e-11
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 0 

Query: 1   MFGMLNDLQAPVEHEEEIELCRLEDEMAMNVGVDIDEDRTNNI 44
           +FGMLNDLQAP+EHEEEIE  RLEDEMAMNVGV+IDED TNNI
Sbjct: 184 IFGMLNDLQAPIEHEEEIEEFRLEDEMAMNVGVNIDEDTTNNI 226

[Close]
BLAST of MELO3C033126 vs. NCBI nr
Match: KAA0056368.1 (uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 7.7e-11
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 0 

Query: 1   MFGMLNDLQAPVEHEEEIELCRLEDEMAMNVGVDIDEDRTNNI 44
           +FGMLNDLQAP+EHEEEIE  RLEDEMAMNVGV+IDED TNNI
Sbjct: 110 IFGMLNDLQAPIEHEEEIEEFRLEDEMAMNVGVNIDEDTTNNI 152

[Close]
BLAST of MELO3C033126 vs. NCBI nr
Match: KAA0032327.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 3.8e-10
Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 0 

Query: 1  MFGMLNDLQAPVEHEEEIELCRLEDEMAMNVGVDIDEDRTNNI 44
          MFGMLNDL AP+EHEEEIE  RLEDEM MNVGV+ID DRTNNI
Sbjct: 1  MFGMLNDLPAPIEHEEEIEELRLEDEMPMNVGVEIDGDRTNNI 43

[Close]
BLAST of MELO3C033126 vs. ExPASy TrEMBL
Match: A0A5D3CIW6 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00980 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.3e-15
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 0 

Query: 1   MFGMLNDLQAPVEHEEEIELCRLEDEMAMNVGVDIDEDRTNNI 44
           MFGMLNDLQAPVEHEEEIELCRLEDEMAMNVGVDIDEDRTNNI
Sbjct: 273 MFGMLNDLQAPVEHEEEIELCRLEDEMAMNVGVDIDEDRTNNI 315

[Close]
BLAST of MELO3C033126 vs. ExPASy TrEMBL
Match: A0A5A7TBN0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold345G00100 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.9e-11
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 0 

Query: 1  MFGMLNDLQAPVEHEEEIELCRLEDEMAMNVGVDIDEDRTNNI 44
          MFGMLNDLQAP+EHEEE E  RLEDE+ MNVG+DIDEDRTNNI
Sbjct: 1  MFGMLNDLQAPIEHEEETEELRLEDEIPMNVGIDIDEDRTNNI 43

[Close]
BLAST of MELO3C033126 vs. ExPASy TrEMBL
Match: A0A5D3D5X7 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00580 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.7e-11
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 0 

Query: 1   MFGMLNDLQAPVEHEEEIELCRLEDEMAMNVGVDIDEDRTNNI 44
           +FGMLNDLQAP+EHEEEIE  RLEDEMAMNVGV+IDED TNNI
Sbjct: 184 IFGMLNDLQAPIEHEEEIEEFRLEDEMAMNVGVNIDEDTTNNI 226

[Close]
BLAST of MELO3C033126 vs. ExPASy TrEMBL
Match: A0A5A7UMP4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001050 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.7e-11
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 0 

Query: 1   MFGMLNDLQAPVEHEEEIELCRLEDEMAMNVGVDIDEDRTNNI 44
           +FGMLNDLQAP+EHEEEIE  RLEDEMAMNVGV+IDED TNNI
Sbjct: 110 IFGMLNDLQAPIEHEEEIEEFRLEDEMAMNVGVNIDEDTTNNI 152

[Close]
BLAST of MELO3C033126 vs. ExPASy TrEMBL
Match: A0A5A7SSE5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G001860 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.9e-10
Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 0 

Query: 1  MFGMLNDLQAPVEHEEEIELCRLEDEMAMNVGVDIDEDRTNNI 44
          MFGMLNDL AP+EHEEEIE  RLEDEM MNVGV+ID DRTNNI
Sbjct: 1  MFGMLNDLPAPIEHEEEIEELRLEDEMPMNVGVEIDGDRTNNI 43

The following BLAST results are available for this feature:
BLAST of MELO3C033126 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK11771.18.8e-15100.00uncharacterized protein E5676_scaffold304G00980 [Cucumis melo var. makuwa][more]
KAA0040862.15.9e-1183.72CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
TYK18968.17.7e-1186.05uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa][more]
KAA0056368.17.7e-1186.05uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa][more]
KAA0032327.13.8e-1083.72CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C033126 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033126 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CIW64.3e-15100.00DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TBN02.9e-1183.72CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3D5X73.7e-1186.05Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7UMP43.7e-1186.05Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SSE51.9e-1083.72CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
BLAST of MELO3C033126 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033126.1MELO3C033126.1mRNA