MELO3C033105 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033105
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	SWIM-type domain-containing protein
Location	chr08: 23785487 .. 23785831 (-)
RNA-Seq Expression	MELO3C033105
Synteny	MELO3C033105

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAGAAGAAGAGAACGGAAGGATCTCTTCTGAGATATTTACACAGATAGATTGGGACATTAGAAATTTTGTTTGTGAACAAGGGACTACTTTGGCAAATAGGGATGAATCTGTAGACACATCATGTTTAATTCAGAAGGGAATGTTATTTGACTGCAAGAAAAATCTTCAATTAGCTGTAAAAAAGTACCGTGTGACCCAACACTACGAAATTGTTGTAGTCGAATCGAACCAGAATATTTGGTCTGTTCGATACAAACAGTGGAGTAATGGTTGCAATTGGAGGTTACGTGGAAATACGCGTAAAAGCCACGAATTGTTTGAAATCAGTCAACTGGAAGAAGAG

mRNA sequence

ATAGAAGAAGAGAACGGAAGGATCTCTTCTGAGATATTTACACAGATAGATTGGGACATTAGAAATTTTGTTTGTGAACAAGGGACTACTTTGGCAAATAGGGATGAATCTGTAGACACATCATGTTTAATTCAGAAGGGAATGTTATTTGACTGCAAGAAAAATCTTCAATTAGCTGTAAAAAAGTACCGTGTGACCCAACACTACGAAATTGTTGTAGTCGAATCGAACCAGAATATTTGGTCTGTTCGATACAAACAGTGGAGTAATGGTTGCAATTGGAGGTTACGTGGAAATACGCGTAAAAGCCACGAATTGTTTGAAATCAGTCAACTGGAAGAAGAG

Coding sequence (CDS)

ATAGAAGAAGAGAACGGAAGGATCTCTTCTGAGATATTTACACAGATAGATTGGGACATTAGAAATTTTGTTTGTGAACAAGGGACTACTTTGGCAAATAGGGATGAATCTGTAGACACATCATGTTTAATTCAGAAGGGAATGTTATTTGACTGCAAGAAAAATCTTCAATTAGCTGTAAAAAAGTACCGTGTGACCCAACACTACGAAATTGTTGTAGTCGAATCGAACCAGAATATTTGGTCTGTTCGATACAAACAGTGGAGTAATGGTTGCAATTGGAGGTTACGTGGAAATACGCGTAAAAGCCACGAATTGTTTGAAATCAGTCAACTGGAAGAAGAG

Protein sequence

IEEENGRISSEIFTQIDWDIRNFVCEQGTTLANRDESVDTSCLIQKGMLFDCKKNLQLAVKKYRVTQHYEIVVVESNQNIWSVRYKQWSNGCNWRLRGNTRKSHELFEISQLEEE

Homology

[Close]

BLAST of MELO3C033105 vs. NCBI nr
Match: KAA0054037.1 (uncharacterized protein E6C27_scaffold318G001000 [Cucumis melo var. makuwa])

HSP 1 Score: 205.7 bits (522), Expect = 2.2e-49
Identity = 100/115 (86.96%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   IEEENGRISSEIFTQIDWDIRNFVCEQGTTLANRDESVDTSCLIQKGMLFDCKKNLQLAV 60
           +EEEN RI SEIFTQIDWDI N VCEQG+TLANRDESVDTSCLIQKGMLFDCK++LQLAV
Sbjct: 35  MEEENERIPSEIFTQIDWDITNSVCEQGSTLANRDESVDTSCLIQKGMLFDCKEDLQLAV 94

Query: 61  KKYRVTQHYEIVVVESNQNIWSVRYKQWSNGCNWRLRGNTRKSHELFEISQLEEE 116
           KKY VTQHYEIVVVESNQNIWSVR KQWSNGCNWRLRG+ RKSH LFEIS+LE E
Sbjct: 95  KKYCVTQHYEIVVVESNQNIWSVRCKQWSNGCNWRLRGSRRKSHGLFEISRLEGE 149

[Close]

BLAST of MELO3C033105 vs. NCBI nr
Match: KAA0044308.1 (uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 201.8 bits (512), Expect = 3.1e-48
Identity = 98/115 (85.22%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 1   IEEENGRISSEIFTQIDWDIRNFVCEQGTTLANRDESVDTSCLIQKGMLFDCKKNLQLAV 60
           +EEEN RI SEIFTQIDWDI N VCEQG+TL NRDE VDTSCLIQKGMLFDCK++LQLAV
Sbjct: 35  MEEENERIPSEIFTQIDWDITNSVCEQGSTLGNRDEFVDTSCLIQKGMLFDCKEDLQLAV 94

Query: 61  KKYRVTQHYEIVVVESNQNIWSVRYKQWSNGCNWRLRGNTRKSHELFEISQLEEE 116
           KKY VTQHYEIVVVESNQNIWSVR KQWSNGCNWRLRG+ RKSH LFEIS+LE E
Sbjct: 95  KKYCVTQHYEIVVVESNQNIWSVRCKQWSNGCNWRLRGSRRKSHGLFEISRLEGE 149

[Close]

BLAST of MELO3C033105 vs. NCBI nr
Match: TYK02543.1 (uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 201.8 bits (512), Expect = 3.1e-48
Identity = 98/115 (85.22%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 1   IEEENGRISSEIFTQIDWDIRNFVCEQGTTLANRDESVDTSCLIQKGMLFDCKKNLQLAV 60
           +EEEN RI SEIFTQIDWDI N VCEQG+TL NRDE VDTSCLIQKGMLFDCK++LQLAV
Sbjct: 35  MEEENERIPSEIFTQIDWDITNSVCEQGSTLGNRDEFVDTSCLIQKGMLFDCKEDLQLAV 94

Query: 61  KKYRVTQHYEIVVVESNQNIWSVRYKQWSNGCNWRLRGNTRKSHELFEISQLEEE 116
           KKY VTQHYEIVVVESNQNIWSVR KQWSNGCNWRLRG+ RKSH LFEIS+LE E
Sbjct: 95  KKYCVTQHYEIVVVESNQNIWSVRCKQWSNGCNWRLRGSRRKSHGLFEISRLEGE 149

[Close]

BLAST of MELO3C033105 vs. NCBI nr
Match: KAA0026169.1 (uncharacterized protein E6C27_scaffold19G001250 [Cucumis melo var. makuwa])

HSP 1 Score: 199.5 bits (506), Expect = 1.6e-47
Identity = 97/115 (84.35%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 1   IEEENGRISSEIFTQIDWDIRNFVCEQGTTLANRDESVDTSCLIQKGMLFDCKKNLQLAV 60
           +EEEN RI SEIFTQIDWDI N VCEQG+TLANRDE VDT CLIQKGMLFDCK++LQLAV
Sbjct: 35  MEEENERIPSEIFTQIDWDITNSVCEQGSTLANRDEFVDTLCLIQKGMLFDCKEDLQLAV 94

Query: 61  KKYRVTQHYEIVVVESNQNIWSVRYKQWSNGCNWRLRGNTRKSHELFEISQLEEE 116
           KKY VTQHY+IVVVESNQNIWSVR KQWSNGCNWRLRG+ RKSH LFEIS+LE E
Sbjct: 95  KKYCVTQHYKIVVVESNQNIWSVRCKQWSNGCNWRLRGSRRKSHGLFEISRLEGE 149

[Close]

BLAST of MELO3C033105 vs. NCBI nr
Match: XP_031741740.1 (uncharacterized protein LOC116403936 [Cucumis sativus])

HSP 1 Score: 180.6 bits (457), Expect = 7.5e-42
Identity = 85/115 (73.91%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 1   IEEENGRISSEIFTQIDWDIRNFVCEQGTTLANRDESVDTSCLIQKGMLFDCKKNLQLAV 60
           IEEEN  ISS+IFTQIDWDI N VCEQG+TLA+R+  VDTSCLI+KGM+FDCK++L LAV
Sbjct: 35  IEEENEIISSDIFTQIDWDIANSVCEQGSTLADRNVYVDTSCLIRKGMIFDCKEDLLLAV 94

Query: 61  KKYRVTQHYEIVVVESNQNIWSVRYKQWSNGCNWRLRGNTRKSHELFEISQLEEE 116
           K+Y VTQHYEIVVVESNQ++W++R KQWSNGC WRLR   RKSH LFEI++L+EE
Sbjct: 95  KRYCVTQHYEIVVVESNQHLWNIRCKQWSNGCTWRLRATKRKSHGLFEITKLQEE 149

[Close]

BLAST of MELO3C033105 vs. ExPASy TrEMBL
Match: A0A5A7UHL3 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold318G001000 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.0e-49
Identity = 100/115 (86.96%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   IEEENGRISSEIFTQIDWDIRNFVCEQGTTLANRDESVDTSCLIQKGMLFDCKKNLQLAV 60
           +EEEN RI SEIFTQIDWDI N VCEQG+TLANRDESVDTSCLIQKGMLFDCK++LQLAV
Sbjct: 35  MEEENERIPSEIFTQIDWDITNSVCEQGSTLANRDESVDTSCLIQKGMLFDCKEDLQLAV 94

Query: 61  KKYRVTQHYEIVVVESNQNIWSVRYKQWSNGCNWRLRGNTRKSHELFEISQLEEE 116
           KKY VTQHYEIVVVESNQNIWSVR KQWSNGCNWRLRG+ RKSH LFEIS+LE E
Sbjct: 95  KKYCVTQHYEIVVVESNQNIWSVRCKQWSNGCNWRLRGSRRKSHGLFEISRLEGE 149

[Close]

BLAST of MELO3C033105 vs. ExPASy TrEMBL
Match: A0A5D3BS92 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00230 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.5e-48
Identity = 98/115 (85.22%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 1   IEEENGRISSEIFTQIDWDIRNFVCEQGTTLANRDESVDTSCLIQKGMLFDCKKNLQLAV 60
           +EEEN RI SEIFTQIDWDI N VCEQG+TL NRDE VDTSCLIQKGMLFDCK++LQLAV
Sbjct: 35  MEEENERIPSEIFTQIDWDITNSVCEQGSTLGNRDEFVDTSCLIQKGMLFDCKEDLQLAV 94

Query: 61  KKYRVTQHYEIVVVESNQNIWSVRYKQWSNGCNWRLRGNTRKSHELFEISQLEEE 116
           KKY VTQHYEIVVVESNQNIWSVR KQWSNGCNWRLRG+ RKSH LFEIS+LE E
Sbjct: 95  KKYCVTQHYEIVVVESNQNIWSVRCKQWSNGCNWRLRGSRRKSHGLFEISRLEGE 149

[Close]

BLAST of MELO3C033105 vs. ExPASy TrEMBL
Match: A0A5A7TN56 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00290 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.5e-48
Identity = 98/115 (85.22%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 1   IEEENGRISSEIFTQIDWDIRNFVCEQGTTLANRDESVDTSCLIQKGMLFDCKKNLQLAV 60
           +EEEN RI SEIFTQIDWDI N VCEQG+TL NRDE VDTSCLIQKGMLFDCK++LQLAV
Sbjct: 35  MEEENERIPSEIFTQIDWDITNSVCEQGSTLGNRDEFVDTSCLIQKGMLFDCKEDLQLAV 94

Query: 61  KKYRVTQHYEIVVVESNQNIWSVRYKQWSNGCNWRLRGNTRKSHELFEISQLEEE 116
           KKY VTQHYEIVVVESNQNIWSVR KQWSNGCNWRLRG+ RKSH LFEIS+LE E
Sbjct: 95  KKYCVTQHYEIVVVESNQNIWSVRCKQWSNGCNWRLRGSRRKSHGLFEISRLEGE 149

[Close]

BLAST of MELO3C033105 vs. ExPASy TrEMBL
Match: A0A5A7SLM1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G001250 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.5e-48
Identity = 97/115 (84.35%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 1   IEEENGRISSEIFTQIDWDIRNFVCEQGTTLANRDESVDTSCLIQKGMLFDCKKNLQLAV 60
           +EEEN RI SEIFTQIDWDI N VCEQG+TLANRDE VDT CLIQKGMLFDCK++LQLAV
Sbjct: 35  MEEENERIPSEIFTQIDWDITNSVCEQGSTLANRDEFVDTLCLIQKGMLFDCKEDLQLAV 94

Query: 61  KKYRVTQHYEIVVVESNQNIWSVRYKQWSNGCNWRLRGNTRKSHELFEISQLEEE 116
           KKY VTQHY+IVVVESNQNIWSVR KQWSNGCNWRLRG+ RKSH LFEIS+LE E
Sbjct: 95  KKYCVTQHYKIVVVESNQNIWSVRCKQWSNGCNWRLRGSRRKSHGLFEISRLEGE 149

[Close]

BLAST of MELO3C033105 vs. ExPASy TrEMBL
Match: A0A5A7TW29 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00010 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.6e-36
Identity = 77/90 (85.56%), Postives = 82/90 (91.11%), Query Frame = 0


Query: 1   IEEENGRISSEIFTQIDWDIRNFVCEQGTTLANRDESVDTSCLIQKGMLFDCKKNLQLAV 60
           +EEEN RI SEIFTQIDWDI N VCEQG+TLANRDE VDTSCLIQKG+LFDCK++ QLAV
Sbjct: 35  MEEENERIPSEIFTQIDWDITNSVCEQGSTLANRDEFVDTSCLIQKGILFDCKEDFQLAV 94

Query: 61  KKYRVTQHYEIVVVESNQNIWSVRYKQWSN 91
           KKY VTQHYEIVVVESNQNIWSVR KQWSN
Sbjct: 95  KKYCVTQHYEIVVVESNQNIWSVRCKQWSN 124

The following BLAST results are available for this feature:

BLAST of MELO3C033105 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054037.1	2.2e-49	86.96	uncharacterized protein E6C27_scaffold318G001000 [Cucumis melo var. makuwa]	[more]
KAA0044308.1	3.1e-48	85.22	uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa]	[more]
TYK02543.1	3.1e-48	85.22	uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa]	[more]
KAA0026169.1	1.6e-47	84.35	uncharacterized protein E6C27_scaffold19G001250 [Cucumis melo var. makuwa]	[more]
XP_031741740.1	7.5e-42	73.91	uncharacterized protein LOC116403936 [Cucumis sativus]	[more]

BLAST of MELO3C033105 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C033105 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UHL3	1.0e-49	86.96	SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3BS92	1.5e-48	85.22	SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7TN56	1.5e-48	85.22	SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5A7SLM1	7.5e-48	84.35	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TW29	6.6e-36	85.56	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]

BLAST of MELO3C033105 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004332	Transposase, MuDR, plant	PFAM	PF03108	DBD_Tnp_Mut	coord: 45..109 e-value: 3.5E-8 score: 33.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033105.1	MELO3C033105.1	mRNA