MELO3C033098 (gene) Melon (DHL92) v4

Overview
NameMELO3C033098
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionKinesin heavy chain-like
Locationchr08: 23277215 .. 23277822 (-)
RNA-Seq ExpressionMELO3C033098
SyntenyMELO3C033098
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTAAAATAAAGAACCTCCCTTTGGATTACTGGAGCAGGAGAACCTTCGAGGTTATCGGGATCATTTTGGGGGACATGAAAGCATCGTCATGGACACTTTAAATCTTACCAACTACAATGAAGCTAGGATTCAAGTTAAACAGAATCTTTGTGGTTTTGTACCTTCCACGATTCAGATTACTGATCCTAAAAAGGGAAACATTTTTTTAAACTTTGGTGATTTCGAATGTTTGAAGCCTCCCTTTCTTACCGTTGGTACTATTATGGTTAGTGATTTTAAAAATTCTATTGACTTATTAAGAATTAGAGAGGCCTTGCAAGATGAAGGTTCAAACCTCTCTTTTTTACCCTCGATTTTAAATGTCCCGAAATCAACTTTTGCACATCTTCACATAGCAAGAAATTCATTTGCAATTCTGGAACACCTTCAAGAACCCTCATCTGTGCCAGAGAAGACGAAAGAAGCAAGAAGTCAGGCCTAAACTTCCTTGCTTGCACTGGAATTCAAAAAGTCATCTCTATTGGATTCTGTAAAACCTGTAAGAACAACTGTCTTGTTGGTTTTGTGGGCCACACTAAGTTAGATTCCCCATTTAAAAAACAG

mRNA sequence

ATGGCTTAAAATAAAGAACCTCCCTTTGGATTACTGGAGCAGGAGAACCTTCGAGGTTATCGGGATCATTTTGGGGGACATGAAAGCATCGTCATGGACACTTTAAATCTTACCAACTACAATGAAGCTAGGATTCAAGTTAAACAGAATCTTTGTGGTTTTGTACCTTCCACGATTCAGATTACTGATCCTAAAAAGGGAAACATTTTTTTAAACTTTGGTGATTTCGAATGTTTGAAGCCTCCCTTTCTTACCGTTGGTACTATTATGGTTAGTGATTTTAAAAATTCTATTGACTTATTAAGAATTAGAGAGGCCTTGCAAGATGAAGGTTCAAACCTCTCTTTTTTACCCTCGATTTTAAATGTCCCGAAATCAACTTTTGCACATCTTCACATAGCAAGAAATTCATTTGCAATTCTGGAACACCTTCAAGAACCCTCATCTGTGCCAGAGAAGACGAAAGAAGCAAGAAGTCAGGCCTAAACTTCCTTGCTTGCACTGGAATTCAAAAAGTCATCTCTATTGGATTCTGTAAAACCTGTAAGAACAACTGTCTTGTTGGTTTTGTGGGCCACACTAAGTTAGATTCCCCATTTAAAAAACAG

Coding sequence (CDS)

ATGGACACTTTAAATCTTACCAACTACAATGAAGCTAGGATTCAAGTTAAACAGAATCTTTGTGGTTTTGTACCTTCCACGATTCAGATTACTGATCCTAAAAAGGGAAACATTTTTTTAAACTTTGGTGATTTCGAATGTTTGAAGCCTCCCTTTCTTACCGTTGGTACTATTATGGTTAGTGATTTTAAAAATTCTATTGACTTATTAAGAATTAGAGAGGCCTTGCAAGATGAAGGTTCAAACCTCTCTTTTTTACCCTCGATTTTAAATGTCCCGAAATCAACTTTTGCACATCTTCACATAGCAAGAAATTCATTTGCAATTCTGGAACACCTTCAAGAACCCTCATCTGTGCCAGAGAAGACGAAAGAAGCAAGAAGTCAGGCCTAA

Protein sequence

MDTLNLTNYNEARIQVKQNLCGFVPSTIQITDPKKGNIFLNFGDFECLKPPFLTVGTIMVSDFKNSIDLLRIREALQDEGSNLSFLPSILNVPKSTFAHLHIARNSFAILEHLQEPSSVPEKTKEARSQA
Homology
BLAST of MELO3C033098 vs. NCBI nr
Match: XP_031738083.1 (uncharacterized protein LOC116402658 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 6.9e-28
Identity = 71/128 (55.47%), Postives = 88/128 (68.75%), Query Frame = 0

Query: 2   DTLNLTNYNEARIQVKQNLCGFVPSTIQITDPKKGNIFLNFGDFECLKPPFLTVGTIMVS 61
           +TLNLTN +EARIQVK+NLCGFV ST +I+D K+GNIFL+FG+FE L PP       +  
Sbjct: 50  ETLNLTNCSEARIQVKRNLCGFVLSTNEISDHKRGNIFLHFGEFEFLSPPISRKSPSVHD 109

Query: 62  DFKNSIDLLRIREALQDEGSNLSFLPSILNVPKSTFAHLHIARNSFAILEHLQEPSSVPE 121
            +KNS+D LRIREAL DEG +LS  P IL+VPKS FA L  +R+ F  L+H    S  PE
Sbjct: 110 VYKNSLDRLRIREALFDEGCDLSSFPPILSVPKSVFATLPRSRSPFQPLQHFPATSPAPE 169

Query: 122 KTKEARSQ 130
           K   +  Q
Sbjct: 170 KMNSSGKQ 177

BLAST of MELO3C033098 vs. NCBI nr
Match: KAA0062494.1 (uncharacterized protein E6C27_scaffold130G00900 [Cucumis melo var. makuwa] >TYK27390.1 uncharacterized protein E5676_scaffold325G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 129.8 bits (325), Expect = 1.7e-26
Identity = 68/125 (54.40%), Postives = 91/125 (72.80%), Query Frame = 0

Query: 1   MDTLNLTNYNEARIQVKQNLCGFVPSTIQITDPKKGNIFLNFGDFECLKPPFLTVGTIMV 60
           ++TLNLTN ++ARIQV +NLCGFV ST +ITD K+GNI+L+FGDFE L PP  +   I++
Sbjct: 82  IETLNLTNCSDARIQVDKNLCGFVLSTFEITDLKRGNIYLHFGDFEFLNPPRPSKVLILL 141

Query: 61  SDFKNSIDLLRIREALQDEGSNLSFLPSILNVPKSTFAHLHIARNSFAILEHLQE-PSSV 120
            DFKNSID L+IR+ L DE  ++S  PS+LN  KS FA L  +RN FAIL+     P ++
Sbjct: 142 DDFKNSIDRLKIRDVLLDEDLDVSSFPSVLNASKSVFAALPRSRNHFAILKLFPAIPPAL 201

Query: 121 PEKTK 125
            +KT+
Sbjct: 202 EKKTE 206

BLAST of MELO3C033098 vs. NCBI nr
Match: KAA0047189.1 (hypothetical protein E6C27_scaffold83G00690 [Cucumis melo var. makuwa] >TYK29739.1 hypothetical protein E5676_scaffold1280G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 128.6 bits (322), Expect = 3.8e-26
Identity = 62/78 (79.49%), Postives = 66/78 (84.62%), Query Frame = 0

Query: 10  NEARIQVKQNLCGFVPSTIQITDPKKGNIFLNFGDFECLKPPFLTVGTIMVSDFKNSIDL 69
           +EARIQVK NLCGFVPSTI+I DPK+GNIFLNFGDFE L PPF T  TIMVSDFK SI L
Sbjct: 169 SEARIQVKHNLCGFVPSTIEIIDPKRGNIFLNFGDFEFLNPPFPTSDTIMVSDFKKSIHL 228

Query: 70  LRIREALQDEGSNLSFLP 88
           LRI E LQDEGS+LSF P
Sbjct: 229 LRIMEVLQDEGSDLSFFP 246

BLAST of MELO3C033098 vs. NCBI nr
Match: KAA0041895.1 (uncharacterized protein E6C27_scaffold67G002950 [Cucumis melo var. makuwa])

HSP 1 Score: 128.3 bits (321), Expect = 5.0e-26
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0

Query: 1   MDTLNLTNYNEARIQVKQNLCGFVPSTIQITDPKKGNIFLNFGDFECLKPPFLTVGTIM 60
           MDTLNLTNYNEARIQVKQNLCGFVPSTIQITDPKKGNIFLNFGDFECLKPPFLTVGTIM
Sbjct: 76  MDTLNLTNYNEARIQVKQNLCGFVPSTIQITDPKKGNIFLNFGDFECLKPPFLTVGTIM 134

BLAST of MELO3C033098 vs. NCBI nr
Match: TYK05420.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-24
Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 0

Query: 1    MDTLNLTNYNEARIQVKQNLCGFVPSTIQITDPKKGNIFLNFGDFECLKPPFLTVGTIM 60
            MDTLNLTNYNEARIQVKQNLCGFVPSTIQITDPK+GNIFLNFG FECLKPPFLTVGTIM
Sbjct: 1200 MDTLNLTNYNEARIQVKQNLCGFVPSTIQITDPKRGNIFLNFGYFECLKPPFLTVGTIM 1258

BLAST of MELO3C033098 vs. ExPASy TrEMBL
Match: A0A5D3DVS9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00720 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 8.3e-27
Identity = 68/125 (54.40%), Postives = 91/125 (72.80%), Query Frame = 0

Query: 1   MDTLNLTNYNEARIQVKQNLCGFVPSTIQITDPKKGNIFLNFGDFECLKPPFLTVGTIMV 60
           ++TLNLTN ++ARIQV +NLCGFV ST +ITD K+GNI+L+FGDFE L PP  +   I++
Sbjct: 82  IETLNLTNCSDARIQVDKNLCGFVLSTFEITDLKRGNIYLHFGDFEFLNPPRPSKVLILL 141

Query: 61  SDFKNSIDLLRIREALQDEGSNLSFLPSILNVPKSTFAHLHIARNSFAILEHLQE-PSSV 120
            DFKNSID L+IR+ L DE  ++S  PS+LN  KS FA L  +RN FAIL+     P ++
Sbjct: 142 DDFKNSIDRLKIRDVLLDEDLDVSSFPSVLNASKSVFAALPRSRNHFAILKLFPAIPPAL 201

Query: 121 PEKTK 125
            +KT+
Sbjct: 202 EKKTE 206

BLAST of MELO3C033098 vs. ExPASy TrEMBL
Match: A0A5A7U128 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1280G00090 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.8e-26
Identity = 62/78 (79.49%), Postives = 66/78 (84.62%), Query Frame = 0

Query: 10  NEARIQVKQNLCGFVPSTIQITDPKKGNIFLNFGDFECLKPPFLTVGTIMVSDFKNSIDL 69
           +EARIQVK NLCGFVPSTI+I DPK+GNIFLNFGDFE L PPF T  TIMVSDFK SI L
Sbjct: 169 SEARIQVKHNLCGFVPSTIEIIDPKRGNIFLNFGDFEFLNPPFPTSDTIMVSDFKKSIHL 228

Query: 70  LRIREALQDEGSNLSFLP 88
           LRI E LQDEGS+LSF P
Sbjct: 229 LRIMEVLQDEGSDLSFFP 246

BLAST of MELO3C033098 vs. ExPASy TrEMBL
Match: A0A5A7TKC9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G002950 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.4e-26
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0

Query: 1   MDTLNLTNYNEARIQVKQNLCGFVPSTIQITDPKKGNIFLNFGDFECLKPPFLTVGTIM 60
           MDTLNLTNYNEARIQVKQNLCGFVPSTIQITDPKKGNIFLNFGDFECLKPPFLTVGTIM
Sbjct: 76  MDTLNLTNYNEARIQVKQNLCGFVPSTIQITDPKKGNIFLNFGDFECLKPPFLTVGTIM 134

BLAST of MELO3C033098 vs. ExPASy TrEMBL
Match: A0A5D3C234 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001090 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.9e-25
Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 0

Query: 1    MDTLNLTNYNEARIQVKQNLCGFVPSTIQITDPKKGNIFLNFGDFECLKPPFLTVGTIM 60
            MDTLNLTNYNEARIQVKQNLCGFVPSTIQITDPK+GNIFLNFG FECLKPPFLTVGTIM
Sbjct: 1200 MDTLNLTNYNEARIQVKQNLCGFVPSTIQITDPKRGNIFLNFGYFECLKPPFLTVGTIM 1258

BLAST of MELO3C033098 vs. ExPASy TrEMBL
Match: A0A5A7U6A9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G001030 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 6.6e-24
Identity = 67/128 (52.34%), Postives = 81/128 (63.28%), Query Frame = 0

Query: 2   DTLNLTNYNEARIQVKQNLCGFVPSTIQITDPKKGNIFLNFGDFECLKPPFLTVGTIMVS 61
           +TLNLTN  EA IQVK+NLCGFVP TI+ITD K+ NI+L+FGDFE L P   +    +  
Sbjct: 97  ETLNLTNITEAWIQVKKNLCGFVPPTIEITDLKRKNIYLHFGDFEFLNPTGPSKVPSLWD 156

Query: 62  DFKNSIDLLRIREALQDEGSNLSFLPSILNVPKSTFAHLHIARNSFAILEHLQEPSSVPE 121
           DF NSID LR+R+ L DE  + S  PSI  VPKS FA L   RN + IL+      S P+
Sbjct: 157 DFNNSIDCLRVRDVLLDEDIDPSSFPSIPKVPKSVFAVLPRGRNPYEILKKFPAIPSAPK 216

Query: 122 KTKEARSQ 130
           K   A  Q
Sbjct: 217 KKTAADIQ 224

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_031738083.16.9e-2855.47uncharacterized protein LOC116402658 [Cucumis sativus][more]
KAA0062494.11.7e-2654.40uncharacterized protein E6C27_scaffold130G00900 [Cucumis melo var. makuwa] >TYK2... [more]
KAA0047189.13.8e-2679.49hypothetical protein E6C27_scaffold83G00690 [Cucumis melo var. makuwa] >TYK29739... [more]
KAA0041895.15.0e-26100.00uncharacterized protein E6C27_scaffold67G002950 [Cucumis melo var. makuwa][more]
TYK05420.11.2e-2496.61Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DVS98.3e-2754.40Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U1281.8e-2679.49Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TKC92.4e-26100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3C2345.9e-2596.61Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7U6A96.6e-2452.34Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033098.1MELO3C033098.1mRNA