MELO3C033061 (gene) Melon (DHL92) v4

Overview
NameMELO3C033061
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptiontransmembrane protein 208 homolog
Locationchr07: 9824690 .. 9824845 (+)
RNA-Seq ExpressionMELO3C033061
SyntenyMELO3C033061
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAGCCAACCTATGGTGATGATGGTGAACTTCTAGATGGTGGATTTGATATGAGTACTGGTGGAATTTGTGGGTTTGTCTTCTTTCTTCTTAATGTATAACCATTACATGTCAGTTTCATGTATGTTTTATCTCCATTACATAAAGAATAG

mRNA sequence

ATGGCAAAGCCAACCTATGGTGATGATGGTGAACTTCTAGATGGTGGATTTGATATGAGTACTGGTGGAATTTGTGGGTTTGTCTTCTTTCTTCTTAATGTATAACCATTACATGTCAGTTTCATGTATGTTTTATCTCCATTACATAAAGAATAG

Coding sequence (CDS)

ATGGCAAAGCCAACCTATGGTGATGATGGTGAACTTCTAGATGGTGGATTTGATATGAGTACTGGTGGAATTTGTGGGTTTGTCTTCTTTCTTCTTAATGTATAA

Protein sequence

MAKPTYGDDGELLDGGFDMSTGGICGFVFFLLNV
Homology
BLAST of MELO3C033061 vs. NCBI nr
Match: XP_023522144.1 (transmembrane protein 208 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-07
Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = 0

Query: 1   MAKPTYGDDGELLDGGFDMSTGGICGFVFFLLNV 35
           MA PTYGDDGELLDGGFDM TGGICG+V  LLNV
Sbjct: 68  MADPTYGDDGELLDGGFDMRTGGICGYVLCLLNV 101

BLAST of MELO3C033061 vs. NCBI nr
Match: XP_022888095.1 (transmembrane protein 208-like [Olea europaea var. sylvestris] >CAA2998791.1 transmembrane 208 homolog [Olea europaea subsp. europaea])

HSP 1 Score: 60.5 bits (145), Expect = 3.3e-06
Identity = 25/34 (73.53%), Postives = 31/34 (91.18%), Query Frame = 0

Query: 1   MAKPTYGDDGELLDGGFDMSTGGICGFVFFLLNV 35
           MAKP+YGDDGELLDGGFDMSTGGICG++  ++ +
Sbjct: 68  MAKPSYGDDGELLDGGFDMSTGGICGYLHDIIYI 101

BLAST of MELO3C033061 vs. NCBI nr
Match: CAA2998793.1 (transmembrane 208 homolog [Olea europaea subsp. europaea])

HSP 1 Score: 60.5 bits (145), Expect = 3.3e-06
Identity = 25/34 (73.53%), Postives = 31/34 (91.18%), Query Frame = 0

Query: 1  MAKPTYGDDGELLDGGFDMSTGGICGFVFFLLNV 35
          MAKP+YGDDGELLDGGFDMSTGGICG++  ++ +
Sbjct: 52 MAKPSYGDDGELLDGGFDMSTGGICGYLHDIIYI 85

BLAST of MELO3C033061 vs. NCBI nr
Match: OAY46856.1 (hypothetical protein MANES_06G033000v8 [Manihot esculenta])

HSP 1 Score: 60.5 bits (145), Expect = 3.3e-06
Identity = 25/28 (89.29%), Postives = 28/28 (100.00%), Query Frame = 0

Query: 1  MAKPTYGDDGELLDGGFDMSTGGICGFV 29
          MAKP+YGDDGELLDGGFDMSTGGICG++
Sbjct: 68 MAKPSYGDDGELLDGGFDMSTGGICGYL 95

BLAST of MELO3C033061 vs. NCBI nr
Match: XP_021614534.1 (transmembrane protein 208 homolog [Manihot esculenta] >OAY46855.1 hypothetical protein MANES_06G033000v8 [Manihot esculenta])

HSP 1 Score: 60.5 bits (145), Expect = 3.3e-06
Identity = 25/28 (89.29%), Postives = 28/28 (100.00%), Query Frame = 0

Query: 1  MAKPTYGDDGELLDGGFDMSTGGICGFV 29
          MAKP+YGDDGELLDGGFDMSTGGICG++
Sbjct: 68 MAKPSYGDDGELLDGGFDMSTGGICGYL 95

BLAST of MELO3C033061 vs. ExPASy TrEMBL
Match: A0A2C9VMN2 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G033000 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-06
Identity = 25/28 (89.29%), Postives = 28/28 (100.00%), Query Frame = 0

Query: 1  MAKPTYGDDGELLDGGFDMSTGGICGFV 29
          MAKP+YGDDGELLDGGFDMSTGGICG++
Sbjct: 68 MAKPSYGDDGELLDGGFDMSTGGICGYL 95

BLAST of MELO3C033061 vs. ExPASy TrEMBL
Match: A0A2C9VMI4 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G033000 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-06
Identity = 25/28 (89.29%), Postives = 28/28 (100.00%), Query Frame = 0

Query: 1  MAKPTYGDDGELLDGGFDMSTGGICGFV 29
          MAKP+YGDDGELLDGGFDMSTGGICG++
Sbjct: 68 MAKPSYGDDGELLDGGFDMSTGGICGYL 95

BLAST of MELO3C033061 vs. ExPASy TrEMBL
Match: A0A6J1DIN6 (transmembrane protein 208 homolog OS=Momordica charantia OX=3673 GN=LOC111020872 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-06
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0

Query: 1  MAKPTYGDDGELLDGGFDMSTGGICGFV 29
          MA PTYGDDGELLDGGFDMSTGGICG++
Sbjct: 68 MANPTYGDDGELLDGGFDMSTGGICGYL 95

BLAST of MELO3C033061 vs. ExPASy TrEMBL
Match: A0A6J1KBQ8 (transmembrane protein 208 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494021 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.7e-06
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0

Query: 1  MAKPTYGDDGELLDGGFDMSTGGICGFV 29
          MA PTYGDDGELLDGGFDMSTGGICG++
Sbjct: 68 MADPTYGDDGELLDGGFDMSTGGICGYM 95

BLAST of MELO3C033061 vs. ExPASy TrEMBL
Match: A0A7J7DC01 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW08G00451 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.7e-06
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0

Query: 1  MAKPTYGDDGELLDGGFDMSTGGICGFV 29
          MAKPTY DDGELLDGGFDMSTGGICG++
Sbjct: 68 MAKPTYADDGELLDGGFDMSTGGICGYL 95

BLAST of MELO3C033061 vs. TAIR 10
Match: AT2G23940.1 (Protein of unknown function (DUF788) )

HSP 1 Score: 52.4 bits (124), Expect = 8.4e-08
Identity = 21/28 (75.00%), Postives = 26/28 (92.86%), Query Frame = 0

Query: 1  MAKPTYGDDGELLDGGFDMSTGGICGFV 29
          MAKP+  DDGEL+DGGFDM+TGGICG++
Sbjct: 68 MAKPSVTDDGELIDGGFDMTTGGICGYL 95

BLAST of MELO3C033061 vs. TAIR 10
Match: AT4G30500.1 (Protein of unknown function (DUF788) )

HSP 1 Score: 48.1 bits (113), Expect = 1.6e-06
Identity = 21/34 (61.76%), Postives = 27/34 (79.41%), Query Frame = 0

Query: 1   MAKPTYGDDGELLDGGFDMSTGGICGFVFFLLNV 35
           MAKP+  D GELLDGGFDMST G+CG++  +L +
Sbjct: 68  MAKPSVSDAGELLDGGFDMSTPGMCGYLHDVLYI 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023522144.11.8e-0785.29transmembrane protein 208 homolog [Cucurbita pepo subsp. pepo][more]
XP_022888095.13.3e-0673.53transmembrane protein 208-like [Olea europaea var. sylvestris] >CAA2998791.1 tra... [more]
CAA2998793.13.3e-0673.53transmembrane 208 homolog [Olea europaea subsp. europaea][more]
OAY46856.13.3e-0689.29hypothetical protein MANES_06G033000v8 [Manihot esculenta][more]
XP_021614534.13.3e-0689.29transmembrane protein 208 homolog [Manihot esculenta] >OAY46855.1 hypothetical p... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2C9VMN21.6e-0689.29Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G033000 PE=3 SV=... [more]
A0A2C9VMI41.6e-0689.29Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G033000 PE=3 SV=... [more]
A0A6J1DIN62.1e-0689.29transmembrane protein 208 homolog OS=Momordica charantia OX=3673 GN=LOC111020872... [more]
A0A6J1KBQ82.7e-0689.29transmembrane protein 208 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494021 PE... [more]
A0A7J7DC012.7e-0689.29Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW08G00451 ... [more]
Match NameE-valueIdentityDescription
AT2G23940.18.4e-0875.00Protein of unknown function (DUF788) [more]
AT4G30500.11.6e-0661.76Protein of unknown function (DUF788) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008506SRP-independent targeting protein 2/TMEM208PFAMPF05620TMEM208_SND2coord: 1..29
e-value: 3.4E-5
score: 23.7

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033061.1MELO3C033061.1mRNA