MELO3C033060 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACACTCCCCTTTCCTTCTTCAAAATCTCTCCCCTCACGAACGATGAACAACGCACAACGAAAACCCTAACCTTAACCCTATTCTTCTCATCTCCACGTCGTTTCTTCTCGACGACGAAGACCCACGGCGAGGAGACCCATATCGTCGATGATGAGTTCTTGATCTTTCTTTTTTCTTTTCTTCTCCCTCTGTTTATCTCTTCCTCTGTGCACAGTCCCACAAATTACCTTAATAAATTCAAGAGGAAGTAGGGTTCTAAGAGACATATAAAGAGCACTGATTTCTTGTCTTCTTTGTCTCTCCCTTTCTCTCCCTAACTCAACAACGCCTTTGTCCATTCCCTAAGGTACCTAACTTAAAAACGCTTTTTAACTATTTTGTGATTCTTTAAAGGTATATTGATGGTTTTGTGAAATATATTATTGGCTATGTGATGAAGCATTTTGGTAGCTTACAATGTGTTTGATGAAATGTCTCAATGAAGCCTTTGGTTGATTTTTAATTGATTTTTGTTTGTTTGAATTAGGAAATCAAGGCCAAGGGAGATTTCATGGCTAAGGGAGGAAGCTTTGAGAAAAAGAGAATGAAAATGAATGGTTAGATTTTAAACTTTGATGATGTGTAGGGCCTTTAAGTATTTTCTAGAGTTTAGTTGTTACGGTCTTACATGTTTAATGTTAGGTTTTATTTCTAGTAGTGCAGGAATTTCAATCTCCTCTCTTATTGAAAAGAATATTTAGTCTTAGGAAGTATTTAGGATTGTTTCTCAAGGAATGAATTTTTGAATGAATCAAAAATTATTTGGATACATGGTTCTATATTCTGATATGGTTTCTTACATAGCACTTTAAGGTGCTTACATATTTTTTTAAAACATGAAAATTTTCAGAAGACTGTTGCCAAAGACACTCTCAAGGATGGCTTTCAATTTTAAAATTCAATCAACCAAAAAAGGAAAAGTGCCAACTTTTTTAATGTAATTAAAAAGGCTTCAATTTCACTCATTCCCTCGATGACTGTTCATGAAAAGGCGTGAAAGAACTGAGATCGTGTCTATATCTTATAAGCCCATGATATAGCATTGCATCTTCCCACTTCTTTTTCATTTTTCAACAACTTTTTGAGTATTTTCATTGGTTTCTCTTCTTCAGGTAAATGTTTTCTCTTTGGTATAACATTTTTTGGGTTTCGTATCTTTTTTAAAATTCAAAGTTTGATTGGAAAATTTTTTATAACGAAGAATTATTTATTTACTTTCAGATCTAGATGACACTCTTTATCCTTTTAACTCTGGATTGACAAAGAAAATCACCAACAAAATTCTAGGTTAGATGGAATTTCCTTTCCCCTTTTCCCTCTGGATTCAGAAACCTTTGGGGTTGATAGTGTTTAGAGAAATGAGACTCTTCGTATATCTATGATATTGTCCATTTTGAACTTGAGTTTGCATGAGGCTCTTCGTATATTTATGATATTGTCCATTTTGAACTTGAGTTTGCATGATGCTCTTCGTATATCTATGATATTGTCCATTTTGAACTTGAGTTTGCATGAATTTATCTTTTTAAAATCTTATCTTATGATCAGTACTCATTATGTTGGAGAAACTTTTAACTAGAAACATGGAGGACATCATGTGTTGGTGTATGTATTGAGGTTTTCTTTTGTGTTGGTGTATGTGTTGAAAATGTTCTGGTTTTCACAAATTTTCGTTATGTAGCTGAGATTCTAATGTCGAAGAATCGAAGATACAAAGAAACTATAGGATTTCTGTTCACGATGTCGAAAGTACTACAAGCTAGTGAATTATGTATGTTTGCTCGTGTTCGAGGATTTTACTGTTGAACTTTCAAGATTGAGTAAAATGTAGTTGTTGATATTTACTTTCAAATTTGACGTGTTTGATTATCTGAAATGTGGTCGTGATAATTATAGTTTTTGATTCTTTTTTTAGGATGGATTAAGCGAAATGTAGTTGATTGACATGTACTTTCAAATTGAATTTGCTTAATGATACAAATGGGTTTGAGGCATAATTTTAGTTTTTGATTGTTTAGGATGAGGAATGGTTTGTTTATTTGCCAAAATTTCAAATGGGTATGTGGGTCATCATGGTTGAATTTTTTACCTCTCATCATGTTTGTACTTCTCATGTCCAAGGTAGGTTAATAAATTGAAAATTGAAAATTTAACCGTTCAGCAAGTTTATTTCCACGTGAGAGTGGGTAAAGTATATAATCACTTCAGACTGTCGGTGATGCCTTTAATGAAGGCCTGTATGAAGAGCAAGCTGAATTGAAGGGTATTCCATTACTGGAATGA ATGCACACTCCCCTTTCCTTCTTCAAAATCTCTCCCCTCACGAACGATGAACAACGCACAACGAAAACCCTAACCTTAACCCTATTCTTCTCATCTCCACGTCGTTTCTTCTCGACGACGAAGACCCACGGCGAGGAGACCCATATCGTCGATGATGAGTTCTTGATCTTTCTTTTTTCTTTTCTTCTCCCTCTGTTTATCTCTTCCTCTGTGCACAGTCCCACAAATTACCTTAATAAATTCAAGAGGAAGTATATTGATGGTTTTGTGAAATATATTATTGGCTATGTGATGAAGCATTTTGGTAGCTTACAATGTGAAATCAAGGCCAAGGGAGATTTCATGGCTAAGGGAGGAAGCTTTGAGAAAAAGAGAATGAAAATGAATGATCTAGATGACACTCTTTATCCTTTTAACTCTGGATTGACAAAGAAAATCACCAACAAAATTCTAGCTGAGATTCTAATGTCGAAGAATCGAAGATACAAAGAAACTATAGGATTTCTGTTCACGATGTCGAAAGATGGATTAAGCGAAATGATGAGGAATGGTTTGTTTATTTGCCAAAATTTCAAATGGGTATGTGGGTCATCATGGTTGAATTTTTTACCTCTCATCATGTTTGTACTTCTCATGTCCAAGACTGTCGGTGATGCCTTTAATGAAGGCCTGTATGAAGAGCAAGCTGAATTGAAGGGTATTCCATTACTGGAATGA ATGCACACTCCCCTTTCCTTCTTCAAAATCTCTCCCCTCACGAACGATGAACAACGCACAACGAAAACCCTAACCTTAACCCTATTCTTCTCATCTCCACGTCGTTTCTTCTCGACGACGAAGACCCACGGCGAGGAGACCCATATCGTCGATGATGAGTTCTTGATCTTTCTTTTTTCTTTTCTTCTCCCTCTGTTTATCTCTTCCTCTGTGCACAGTCCCACAAATTACCTTAATAAATTCAAGAGGAAGTATATTGATGGTTTTGTGAAATATATTATTGGCTATGTGATGAAGCATTTTGGTAGCTTACAATGTGAAATCAAGGCCAAGGGAGATTTCATGGCTAAGGGAGGAAGCTTTGAGAAAAAGAGAATGAAAATGAATGATCTAGATGACACTCTTTATCCTTTTAACTCTGGATTGACAAAGAAAATCACCAACAAAATTCTAGCTGAGATTCTAATGTCGAAGAATCGAAGATACAAAGAAACTATAGGATTTCTGTTCACGATGTCGAAAGATGGATTAAGCGAAATGATGAGGAATGGTTTGTTTATTTGCCAAAATTTCAAATGGGTATGTGGGTCATCATGGTTGAATTTTTTACCTCTCATCATGTTTGTACTTCTCATGTCCAAGACTGTCGGTGATGCCTTTAATGAAGGCCTGTATGAAGAGCAAGCTGAATTGAAGGGTATTCCATTACTGGAATGA MHTPLSFFKISPLTNDEQRTTKTLTLTLFFSSPRRFFSTTKTHGEETHIVDDEFLIFLFSFLLPLFISSSVHSPTNYLNKFKRKYIDGFVKYIIGYVMKHFGSLQCEIKAKGDFMAKGGSFEKKRMKMNDLDDTLYPFNSGLTKKITNKILAEILMSKNRRYKETIGFLFTMSKDGLSEMMRNGLFICQNFKWVCGSSWLNFLPLIMFVLLMSKTVGDAFNEGLYEEQAELKGIPLLE Homology
BLAST of MELO3C033060 vs. NCBI nr
Match: KAA0061703.1 (chloride channel protein CLC-d [Cucumis melo var. makuwa] >TYK21178.1 chloride channel protein CLC-d [Cucumis melo var. makuwa]) HSP 1 Score: 72.4 bits (176), Expect = 5.9e-09 Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 0
BLAST of MELO3C033060 vs. NCBI nr
Match: XP_023548210.1 (chloride channel protein CLC-d isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 72.4 bits (176), Expect = 5.9e-09 Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 0
BLAST of MELO3C033060 vs. NCBI nr
Match: XP_022959117.1 (chloride channel protein CLC-d isoform X1 [Cucurbita moschata]) HSP 1 Score: 72.4 bits (176), Expect = 5.9e-09 Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 0
BLAST of MELO3C033060 vs. NCBI nr
Match: XP_023548208.1 (chloride channel protein CLC-d isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 72.4 bits (176), Expect = 5.9e-09 Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 0
BLAST of MELO3C033060 vs. NCBI nr
Match: XP_011657577.1 (chloride channel protein CLC-d [Cucumis sativus]) HSP 1 Score: 72.4 bits (176), Expect = 5.9e-09 Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 0
BLAST of MELO3C033060 vs. ExPASy Swiss-Prot
Match: P92943 (Chloride channel protein CLC-d OS=Arabidopsis thaliana OX=3702 GN=CLC-D PE=1 SV=2) HSP 1 Score: 64.7 bits (156), Expect = 1.6e-09 Identity = 32/39 (82.05%), Postives = 33/39 (84.62%), Query Frame = 0
BLAST of MELO3C033060 vs. ExPASy Swiss-Prot
Match: Q96282 (Chloride channel protein CLC-c OS=Arabidopsis thaliana OX=3702 GN=CLC-C PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 7.0e-05 Identity = 21/39 (53.85%), Postives = 29/39 (74.36%), Query Frame = 0
BLAST of MELO3C033060 vs. ExPASy Swiss-Prot
Match: P92941 (Chloride channel protein CLC-a OS=Arabidopsis thaliana OX=3702 GN=CLC-A PE=1 SV=2) HSP 1 Score: 48.9 bits (115), Expect = 9.2e-05 Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0
BLAST of MELO3C033060 vs. ExPASy Swiss-Prot
Match: P92942 (Chloride channel protein CLC-b OS=Arabidopsis thaliana OX=3702 GN=CLC-B PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 6.0e-04 Identity = 21/39 (53.85%), Postives = 28/39 (71.79%), Query Frame = 0
BLAST of MELO3C033060 vs. ExPASy TrEMBL
Match: A0A5D3DCE9 (Chloride channel protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00500 PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 2.9e-09 Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 0
BLAST of MELO3C033060 vs. ExPASy TrEMBL
Match: A0A0A0KI42 (Chloride channel protein OS=Cucumis sativus OX=3659 GN=Csa_6G425060 PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 2.9e-09 Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 0
BLAST of MELO3C033060 vs. ExPASy TrEMBL
Match: A0A6J1H3N7 (Chloride channel protein OS=Cucurbita moschata OX=3662 GN=LOC111460209 PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 2.9e-09 Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 0
BLAST of MELO3C033060 vs. ExPASy TrEMBL
Match: A0A6J1H514 (Chloride channel protein OS=Cucurbita moschata OX=3662 GN=LOC111460209 PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 2.9e-09 Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 0
BLAST of MELO3C033060 vs. ExPASy TrEMBL
Match: A0A1S3BMB3 (Chloride channel protein OS=Cucumis melo OX=3656 GN=LOC103491408 PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 2.9e-09 Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 0
BLAST of MELO3C033060 vs. TAIR 10
Match: AT5G26240.1 (chloride channel D ) HSP 1 Score: 64.7 bits (156), Expect = 1.2e-10 Identity = 32/39 (82.05%), Postives = 33/39 (84.62%), Query Frame = 0
BLAST of MELO3C033060 vs. TAIR 10
Match: AT5G49890.1 (chloride channel C ) HSP 1 Score: 49.3 bits (116), Expect = 5.0e-06 Identity = 21/39 (53.85%), Postives = 29/39 (74.36%), Query Frame = 0
BLAST of MELO3C033060 vs. TAIR 10
Match: AT5G40890.1 (chloride channel A ) HSP 1 Score: 48.9 bits (115), Expect = 6.5e-06 Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0
BLAST of MELO3C033060 vs. TAIR 10
Match: AT5G40890.2 (chloride channel A ) HSP 1 Score: 48.9 bits (115), Expect = 6.5e-06 Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0
BLAST of MELO3C033060 vs. TAIR 10
Match: AT3G27170.1 (chloride channel B ) HSP 1 Score: 46.2 bits (108), Expect = 4.2e-05 Identity = 21/39 (53.85%), Postives = 28/39 (71.79%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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