MELO3C033046 (gene) Melon (DHL92) v4

Overview
NameMELO3C033046
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionAcetyl-CoA carboxylase 1-like
Locationchr08: 18891885 .. 18892849 (-)
RNA-Seq ExpressionMELO3C033046
SyntenyMELO3C033046
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACAGTTGAAGATGTGTTATGTTGTCGGAAACTAGAACTTAACGGATCAATCTCAAGGTAGCATTGTTGGTTCTGCACAATTGTATATATTTCAAATGGATTGTTGGTTGTTGATTATGTATTTTGTGCTGATATTTTTGTTATGAAATGCAATGGTAGGAAAGGGGAAGGCCTTTAATAACACTAGAGTGAAGCGGTCGATTAAGGTGCCCACGATTAGTAACAAGCTAGTAGATATGATGATTATTCATGGAGGAAATATGGCCAAAAGCCAATCAAGGCTTCTCCACACCCAAGGTATACAAATATGATTGCTTTACTTTTCAGTTTATTGTGTTGACGTTGCTTATTTCTTTATAGATTGATATTAGTTTTCATAATAATGTTATGTAAAAAAATGTTGATTATTCATTTGGCGGGCAATATTATGAGCTAATCAATTACAAGAGTTCATAGGATGCCACATAAAATATATTTTTTTTATTTGGGAAAAGGATTGTATATGATTGCATCTATGGAATATTTCTAATATTAGATTGAAGAGATTTAGGAAAGCCTGATGGATGGGGTAGACTGAAGAGAGTTATGTGGATTGGGGTGTGGATATAAAATCTTAAGAACTTTTCATCCTTCTCTATAATTTTAGTGCTTCAAATAGCTTTGTTATTCTATAGATAAATGGTTTATTTGGATATTGTTTGTAGATAATTGAAGTCATATCAGGTTGAAAGCTAAGCGATTGTGCAGAGATGGCCAAGCGATCGTTGAAAATTGAAGACTGAGAAGGCATTTAGGATTTTTAATTATTTAATTCTTGTATTAGAATCTTTTCTCATGTACTATTGTAGAATGTATATATAAACATAATATTAAGATTTTATTTTGTGTATTCAAATGTAAAAGACAAATATTATAGTTTCTAACATAATATGAATTTCATTGATTTGTTGGCGTGTGAAAAACA

mRNA sequence

AAACAGTTGAAGATGTGTTATGTTGTCGGAAACTAGAACTTAACGGATCAATCTCAAGGTAGCATTGTTGGTTCTGCACAATTGTATATATTTCAAATGGATTGTTGGTTGTTGATTATGTATTTTGTGCTGATATTTTTGTTATGAAATGCAATGGTAGGAAAGGGGAAGGCCTTTAATAACACTAGAGTGAAGCGGTCGATTAAGGTGCCCACGATTAGTAACAAGCTAGTAGATATGATGATTATTCATGGAGGAAATATGGCCAAAAGCCAATCAAGGCTTCTCCACACCCAAGGAAAGCCTGATGGATGGGGTAGACTGAAGAGAGTTATGTGGATTGGGATAATTGAAGTCATATCAGGTTGAAAGCTAAGCGATTGTGCAGAGATGGCCAAGCGATCGTTGAAAATTGAAGACTGAGAAGGCATTTAGGATTTTTAATTATTTAATTCTTGTATTAGAATCTTTTCTCATGTACTATTGTAGAATGTATATATAAACATAATATTAAGATTTTATTTTGTGTATTCAAATGTAAAAGACAAATATTATAGTTTCTAACATAATATGAATTTCATTGATTTGTTGGCGTGTGAAAAACA

Coding sequence (CDS)

ATGGTAGGAAAGGGGAAGGCCTTTAATAACACTAGAGTGAAGCGGTCGATTAAGGTGCCCACGATTAGTAACAAGCTAGTAGATATGATGATTATTCATGGAGGAAATATGGCCAAAAGCCAATCAAGGCTTCTCCACACCCAAGGAAAGCCTGATGGATGGGGTAGACTGAAGAGAGTTATGTGGATTGGGATAATTGAAGTCATATCAGGTTGA

Protein sequence

MVGKGKAFNNTRVKRSIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQGKPDGWGRLKRVMWIGIIEVISG
Homology
[Close]
BLAST of MELO3C033046 vs. NCBI nr
Match: KAA0032276.1 (NAD-dependent protein deacylase SRT2 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 88.6 bits (218), Expect = 2.4e-14
Identity = 44/47 (93.62%), Postives = 44/47 (93.62%), Query Frame = 0 

Query: 3   GKGKAFNNTRVKRSIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQG 50
           GKGKAFNNTRVKRSIKVPTISNKL DMMIIH GNMAKSQSRLL TQG
Sbjct: 71  GKGKAFNNTRVKRSIKVPTISNKLADMMIIHRGNMAKSQSRLLRTQG 117

[Close]
BLAST of MELO3C033046 vs. NCBI nr
Match: KAA0065344.1 (ABC transporter I family member 6 [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 4.1e-14
Identity = 43/47 (91.49%), Postives = 44/47 (93.62%), Query Frame = 0 

Query: 3   GKGKAFNNTRVKRSIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQG 50
           GKGKAFNNTRVKRSIKVPTISNKL DMMII+ GNM KSQSRLLHTQG
Sbjct: 419 GKGKAFNNTRVKRSIKVPTISNKLADMMIIYRGNMTKSQSRLLHTQG 465

[Close]
BLAST of MELO3C033046 vs. NCBI nr
Match: KAA0045996.1 (acetyl-CoA carboxylase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 82.0 bits (201), Expect = 2.2e-12
Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 0 

Query: 1   MVGKGKAFNNTRVKRSIKVPTISNKLVDMMIIHGGNMAKSQSRL 45
           + GKGKAFNNTRVKRSIKVPTISNKL DMMIIHGGNMAKSQS++
Sbjct: 200 ITGKGKAFNNTRVKRSIKVPTISNKLADMMIIHGGNMAKSQSKI 243

[Close]
BLAST of MELO3C033046 vs. NCBI nr
Match: KAA0042275.1 (transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 8.5e-12
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 0 

Query: 1   MVGKGKAFNNT----RVKRSIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQ 49
           ++ K KAFNNT    RVKRSIKVPTISN+L DMMIIHGGNMAKSQSR+LHTQ
Sbjct: 141 LIRKEKAFNNTRVKHRVKRSIKVPTISNRLADMMIIHGGNMAKSQSRVLHTQ 192

[Close]
BLAST of MELO3C033046 vs. NCBI nr
Match: KAA0042207.1 (triacylglycerol lipase 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 79.7 bits (195), Expect = 1.1e-11
Identity = 41/52 (78.85%), Postives = 44/52 (84.62%), Query Frame = 0 

Query: 1   MVGKGKAFNNTRVKR----SIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQ 49
           + GKGKAFNNTRVK     SIKVPTISNKL DMMIIHGGNMAKSQS++L TQ
Sbjct: 299 ITGKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQSKVLRTQ 350

[Close]
BLAST of MELO3C033046 vs. ExPASy TrEMBL
Match: A0A5A7SQI0 (NAD-dependent protein deacylase SRT2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G001160 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.2e-14
Identity = 44/47 (93.62%), Postives = 44/47 (93.62%), Query Frame = 0 

Query: 3   GKGKAFNNTRVKRSIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQG 50
           GKGKAFNNTRVKRSIKVPTISNKL DMMIIH GNMAKSQSRLL TQG
Sbjct: 71  GKGKAFNNTRVKRSIKVPTISNKLADMMIIHRGNMAKSQSRLLRTQG 117

[Close]
BLAST of MELO3C033046 vs. ExPASy TrEMBL
Match: A0A5A7VDI7 (ABC transporter I family member 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold301G00160 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-14
Identity = 43/47 (91.49%), Postives = 44/47 (93.62%), Query Frame = 0 

Query: 3   GKGKAFNNTRVKRSIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQG 50
           GKGKAFNNTRVKRSIKVPTISNKL DMMII+ GNM KSQSRLLHTQG
Sbjct: 419 GKGKAFNNTRVKRSIKVPTISNKLADMMIIYRGNMTKSQSRLLHTQG 465

[Close]
BLAST of MELO3C033046 vs. ExPASy TrEMBL
Match: A0A5A7TV25 (Acetyl-CoA carboxylase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005560 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.1e-12
Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 0 

Query: 1   MVGKGKAFNNTRVKRSIKVPTISNKLVDMMIIHGGNMAKSQSRL 45
           + GKGKAFNNTRVKRSIKVPTISNKL DMMIIHGGNMAKSQS++
Sbjct: 200 ITGKGKAFNNTRVKRSIKVPTISNKLADMMIIHGGNMAKSQSKI 243

[Close]
BLAST of MELO3C033046 vs. ExPASy TrEMBL
Match: A0A5A7TLF6 (Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00590 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.1e-12
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 0 

Query: 1   MVGKGKAFNNT----RVKRSIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQ 49
           ++ K KAFNNT    RVKRSIKVPTISN+L DMMIIHGGNMAKSQSR+LHTQ
Sbjct: 141 LIRKEKAFNNTRVKHRVKRSIKVPTISNRLADMMIIHGGNMAKSQSRVLHTQ 192

[Close]
BLAST of MELO3C033046 vs. ExPASy TrEMBL
Match: A0A5A7TKJ7 (Triacylglycerol lipase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G007180 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.4e-12
Identity = 41/52 (78.85%), Postives = 44/52 (84.62%), Query Frame = 0 

Query: 1   MVGKGKAFNNTRVKR----SIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQ 49
           + GKGKAFNNTRVK     SIKVPTISNKL DMMIIHGGNMAKSQS++L TQ
Sbjct: 299 ITGKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQSKVLRTQ 350

The following BLAST results are available for this feature:
BLAST of MELO3C033046 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0032276.12.4e-1493.62NAD-dependent protein deacylase SRT2 isoform X2 [Cucumis melo var. makuwa][more]
KAA0065344.14.1e-1491.49ABC transporter I family member 6 [Cucumis melo var. makuwa][more]
KAA0045996.12.2e-1288.64acetyl-CoA carboxylase 1-like [Cucumis melo var. makuwa][more]
KAA0042275.18.5e-1278.85transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. ma... [more]
KAA0042207.11.1e-1178.85triacylglycerol lipase 1 isoform X2 [Cucumis melo var. makuwa][more]
BLAST of MELO3C033046 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033046 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SQI01.2e-1493.62NAD-dependent protein deacylase SRT2 isoform X2 OS=Cucumis melo var. makuwa OX=1... [more]
A0A5A7VDI72.0e-1491.49ABC transporter I family member 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7TV251.1e-1288.64Acetyl-CoA carboxylase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5A7TLF64.1e-1278.85Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo var. ... [more]
A0A5A7TKJ75.4e-1278.85Triacylglycerol lipase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
BLAST of MELO3C033046 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033046.1MELO3C033046.1mRNA