MELO3C033034 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033034
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	6-phosphogluconate dehydrogenase, decarboxylating
Location	chr07: 11465871 .. 11466068 (+)
RNA-Seq Expression	MELO3C033034
Synteny	MELO3C033034

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAATCACACATTAAGTATAGGCGTGCTAGGCTGCCTGCCAATCTTGTGAAGGCTCAAAGAGACTTATTTGAGGCTCATACATATGAGCGGGTGGATCGCCTAGACTCCTACCACACGGGGTGGACAAAGCTGGCTCGCAATGCTAATACTGGAGTTGGCATTTTCAACTTAGCTTTTGAGCTGCCTACCAATTTG

mRNA sequence

GGAAAATCACACATTAAGTATAGGCGTGCTAGGCTGCCTGCCAATCTTGTGAAGGCTCAAAGAGACTTATTTGAGGCTCATACATATGAGCGGGTGGATCGCCTAGACTCCTACCACACGGGGTGGACAAAGCTGGCTCGCAATGCTAATACTGGAGTTGGCATTTTCAACTTAGCTTTTGAGCTGCCTACCAATTTG

Coding sequence (CDS)

GGAAAATCACACATTAAGTATAGGCGTGCTAGGCTGCCTGCCAATCTTGTGAAGGCTCAAAGAGACTTATTTGAGGCTCATACATATGAGCGGGTGGATCGCCTAGACTCCTACCACACGGGGTGGACAAAGCTGGCTCGCAATGCTAATACTGGAGTTGGCATTTTCAACTTAGCTTTTGAGCTGCCTACCAATTTG

Protein sequence

GKSHIKYRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFNLAFELPTNL

Homology

[Close]

BLAST of MELO3C033034 vs. NCBI nr
Match: KAA0045322.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 120.2 bits (300), Expect = 6.9e-24
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1   GKSHIKYRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFN 58
           GKSHIKYRRARLPANLV+AQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFN
Sbjct: 143 GKSHIKYRRARLPANLVEAQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFN 199

[Close]

BLAST of MELO3C033034 vs. NCBI nr
Match: KAA0054542.1 (6-phosphogluconate dehydrogenase [Cucumis melo var. makuwa])

HSP 1 Score: 120.2 bits (300), Expect = 6.9e-24
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1   GKSHIKYRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFN 58
           GKSHIKYRRARLPANLV+AQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFN
Sbjct: 61  GKSHIKYRRARLPANLVEAQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFN 117

[Close]

BLAST of MELO3C033034 vs. NCBI nr
Match: KAA0059825.1 (6-phosphogluconate dehydrogenase [Cucumis melo var. makuwa] >TYK24784.1 6-phosphogluconate dehydrogenase [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 4.0e-16
Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 7  YRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFNLAFELPTNL 66
          YR ARL ANLV+AQ DLF A+TYERVDR  SYHT WTKLARNA+ GVGI N AF+LPTNL
Sbjct: 28 YRCARLSANLVQAQSDLFGAYTYERVDRQGSYHTEWTKLARNADAGVGILNRAFDLPTNL 87

[Close]

BLAST of MELO3C033034 vs. NCBI nr
Match: KAA0044873.1 (6-phosphogluconate dehydrogenase [Cucumis melo var. makuwa])

HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15
Identity = 44/51 (86.27%), Postives = 46/51 (90.20%), Query Frame = 0


Query: 7   YRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFN 58
           YRRARLPANLV+AQRDLF AHTYERVDR  SYHT WTKLARNA+ GVGIFN
Sbjct: 445 YRRARLPANLVQAQRDLFGAHTYERVDRQGSYHTEWTKLARNADAGVGIFN 495

[Close]

BLAST of MELO3C033034 vs. NCBI nr
Match: XP_008451978.1 (PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic [Cucumis melo] >TYK16597.1 6-phosphogluconate dehydrogenase [Cucumis melo var. makuwa])

HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15
Identity = 44/51 (86.27%), Postives = 46/51 (90.20%), Query Frame = 0


Query: 7   YRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFN 58
           YRRARLPANLV+AQRDLF AHTYERVDR  SYHT WTKLARNA+ GVGIFN
Sbjct: 445 YRRARLPANLVQAQRDLFGAHTYERVDRQGSYHTEWTKLARNADAGVGIFN 495

[Close]

BLAST of MELO3C033034 vs. ExPASy Swiss-Prot
Match: Q9FFR3 (6-phosphogluconate dehydrogenase, decarboxylating 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGD3 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 9.7e-13
Identity = 34/43 (79.07%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 7   YRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNA 50
           YRRARLPANLV+AQRDLF AHTYER DR  +YHT WTKLAR +
Sbjct: 444 YRRARLPANLVQAQRDLFGAHTYERTDRPGAYHTEWTKLARKS 486

[Close]

BLAST of MELO3C033034 vs. ExPASy Swiss-Prot
Match: Q9SH69 (6-phosphogluconate dehydrogenase, decarboxylating 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGD1 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-12
Identity = 34/41 (82.93%), Postives = 36/41 (87.80%), Query Frame = 0


Query: 7   YRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLAR 48
           YRRARLPANLV+AQRDLF AHTYER DR  +YHT WTKLAR
Sbjct: 444 YRRARLPANLVQAQRDLFGAHTYERTDRPGAYHTEWTKLAR 484

[Close]

BLAST of MELO3C033034 vs. ExPASy Swiss-Prot
Match: Q2R480 (6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=G6PGH2 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.8e-12
Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 0


Query: 7   YRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNAN 51
           YR +RLPANL++AQRDLF AHTYER+DR  S+HT WTKLAR +N
Sbjct: 461 YRCSRLPANLIQAQRDLFGAHTYERIDRPGSFHTEWTKLARKSN 504

[Close]

BLAST of MELO3C033034 vs. ExPASy Swiss-Prot
Match: Q94KU2 (6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic OS=Spinacia oleracea OX=3562 GN=pgdP PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.8e-12
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 7   YRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGV 54
           YRRARLPANLV+AQRD F AHTYERVD   SYHT W+KLAR ++  V
Sbjct: 486 YRRARLPANLVQAQRDYFGAHTYERVDLPGSYHTEWSKLARKSDPNV 532

[Close]

BLAST of MELO3C033034 vs. ExPASy Swiss-Prot
Match: Q9LI00 (6-phosphogluconate dehydrogenase, decarboxylating 1 OS=Oryza sativa subsp. japonica OX=39947 GN=G6PGH1 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.4e-10
Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 7   YRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNA 50
           YRR RLPANLV+AQRD F AHTYERVD   S+HT W K+AR A
Sbjct: 436 YRRDRLPANLVQAQRDYFGAHTYERVDMPGSFHTEWFKIARAA 478

[Close]

BLAST of MELO3C033034 vs. ExPASy TrEMBL
Match: A0A5A7UFK0 (Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G003260 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.3e-24
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1   GKSHIKYRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFN 58
           GKSHIKYRRARLPANLV+AQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFN
Sbjct: 61  GKSHIKYRRARLPANLVEAQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFN 117

[Close]

BLAST of MELO3C033034 vs. ExPASy TrEMBL
Match: A0A5A7TPM9 (Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00940 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.3e-24
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1   GKSHIKYRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFN 58
           GKSHIKYRRARLPANLV+AQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFN
Sbjct: 143 GKSHIKYRRARLPANLVEAQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFN 199

[Close]

BLAST of MELO3C033034 vs. ExPASy TrEMBL
Match: A0A5A7V1S9 (Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00260 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.0e-16
Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 7  YRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFNLAFELPTNL 66
          YR ARL ANLV+AQ DLF A+TYERVDR  SYHT WTKLARNA+ GVGI N AF+LPTNL
Sbjct: 28 YRCARLSANLVQAQSDLFGAYTYERVDRQGSYHTEWTKLARNADAGVGILNRAFDLPTNL 87

[Close]

BLAST of MELO3C033034 vs. ExPASy TrEMBL
Match: A0A5D3CXH5 (6-phosphogluconate dehydrogenase, decarboxylating OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004200 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.7e-16
Identity = 44/51 (86.27%), Postives = 46/51 (90.20%), Query Frame = 0


Query: 7   YRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFN 58
           YRRARLPANLV+AQRDLF AHTYERVDR  SYHT WTKLARNA+ GVGIFN
Sbjct: 445 YRRARLPANLVQAQRDLFGAHTYERVDRQGSYHTEWTKLARNADAGVGIFN 495

[Close]

BLAST of MELO3C033034 vs. ExPASy TrEMBL
Match: A0A5A7TMY9 (6-phosphogluconate dehydrogenase, decarboxylating OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001660 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.7e-16
Identity = 44/51 (86.27%), Postives = 46/51 (90.20%), Query Frame = 0


Query: 7   YRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNANTGVGIFN 58
           YRRARLPANLV+AQRDLF AHTYERVDR  SYHT WTKLARNA+ GVGIFN
Sbjct: 445 YRRARLPANLVQAQRDLFGAHTYERVDRQGSYHTEWTKLARNADAGVGIFN 495

[Close]

BLAST of MELO3C033034 vs. TAIR 10
Match: AT5G41670.1 (6-phosphogluconate dehydrogenase family protein )

HSP 1 Score: 73.6 bits (179), Expect = 6.9e-14
Identity = 34/43 (79.07%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 7   YRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNA 50
           YRRARLPANLV+AQRDLF AHTYER DR  +YHT WTKLAR +
Sbjct: 444 YRRARLPANLVQAQRDLFGAHTYERTDRPGAYHTEWTKLARKS 486

[Close]

BLAST of MELO3C033034 vs. TAIR 10
Match: AT5G41670.2 (6-phosphogluconate dehydrogenase family protein )

HSP 1 Score: 73.6 bits (179), Expect = 6.9e-14
Identity = 34/43 (79.07%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 7   YRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNA 50
           YRRARLPANLV+AQRDLF AHTYER DR  +YHT WTKLAR +
Sbjct: 444 YRRARLPANLVQAQRDLFGAHTYERTDRPGAYHTEWTKLARKS 486

[Close]

BLAST of MELO3C033034 vs. TAIR 10
Match: AT1G64190.1 (6-phosphogluconate dehydrogenase family protein )

HSP 1 Score: 73.2 bits (178), Expect = 9.0e-14
Identity = 34/41 (82.93%), Postives = 36/41 (87.80%), Query Frame = 0


Query: 7   YRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLAR 48
           YRRARLPANLV+AQRDLF AHTYER DR  +YHT WTKLAR
Sbjct: 444 YRRARLPANLVQAQRDLFGAHTYERTDRPGAYHTEWTKLAR 484

[Close]

BLAST of MELO3C033034 vs. TAIR 10
Match: AT3G02360.2 (6-phosphogluconate dehydrogenase family protein )

HSP 1 Score: 62.8 bits (151), Expect = 1.2e-10
Identity = 29/43 (67.44%), Postives = 33/43 (76.74%), Query Frame = 0


Query: 7   YRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNA 50
           YRR RLPANLV+AQRD F AHTYER D   S+HT W K+AR +
Sbjct: 442 YRRERLPANLVQAQRDYFGAHTYERTDVEGSFHTEWFKIARQS 484

[Close]

BLAST of MELO3C033034 vs. TAIR 10
Match: AT3G02360.1 (6-phosphogluconate dehydrogenase family protein )

HSP 1 Score: 62.8 bits (151), Expect = 1.2e-10
Identity = 29/43 (67.44%), Postives = 33/43 (76.74%), Query Frame = 0


Query: 7   YRRARLPANLVKAQRDLFEAHTYERVDRLDSYHTGWTKLARNA 50
           YRR RLPANLV+AQRD F AHTYER D   S+HT W K+AR +
Sbjct: 442 YRRERLPANLVQAQRDYFGAHTYERTDVEGSFHTEWFKIARQS 484

The following BLAST results are available for this feature:

BLAST of MELO3C033034 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045322.1	6.9e-24	98.25	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054542.1	6.9e-24	98.25	6-phosphogluconate dehydrogenase [Cucumis melo var. makuwa]	[more]
KAA0059825.1	4.0e-16	76.67	6-phosphogluconate dehydrogenase [Cucumis melo var. makuwa] >TYK24784.1 6-phosph...	[more]
KAA0044873.1	1.2e-15	86.27	6-phosphogluconate dehydrogenase [Cucumis melo var. makuwa]	[more]
XP_008451978.1	1.2e-15	86.27	PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic [C...	[more]

BLAST of MELO3C033034 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFR3	9.7e-13	79.07	6-phosphogluconate dehydrogenase, decarboxylating 3, chloroplastic OS=Arabidopsi...	[more]
Q9SH69	1.3e-12	82.93	6-phosphogluconate dehydrogenase, decarboxylating 1, chloroplastic OS=Arabidopsi...	[more]
Q2R480	2.8e-12	72.73	6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic OS=Oryza sati...	[more]
Q94KU2	2.8e-12	72.34	6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic OS=Spinacia o...	[more]
Q9LI00	3.4e-10	72.09	6-phosphogluconate dehydrogenase, decarboxylating 1 OS=Oryza sativa subsp. japon...	[more]

BLAST of MELO3C033034 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UFK0	3.3e-24	98.25	Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) OS=Cucumis m...	[more]
A0A5A7TPM9	3.3e-24	98.25	Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) OS=Cucumis m...	[more]
A0A5A7V1S9	2.0e-16	76.67	Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) OS=Cucumis m...	[more]
A0A5D3CXH5	5.7e-16	86.27	6-phosphogluconate dehydrogenase, decarboxylating OS=Cucumis melo var. makuwa OX...	[more]
A0A5A7TMY9	5.7e-16	86.27	6-phosphogluconate dehydrogenase, decarboxylating OS=Cucumis melo var. makuwa OX...	[more]

BLAST of MELO3C033034 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41670.1	6.9e-14	79.07	6-phosphogluconate dehydrogenase family protein	[more]
AT5G41670.2	6.9e-14	79.07	6-phosphogluconate dehydrogenase family protein	[more]
AT1G64190.1	9.0e-14	82.93	6-phosphogluconate dehydrogenase family protein	[more]
AT3G02360.2	1.2e-10	67.44	6-phosphogluconate dehydrogenase family protein	[more]
AT3G02360.1	1.2e-10	67.44	6-phosphogluconate dehydrogenase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006114	6-phosphogluconate dehydrogenase, C-terminal	PFAM	PF00393	6PGD	coord: 6..42 e-value: 4.4E-10 score: 39.4
None	No IPR available	GENE3D	1.20.5.320		coord: 11..44 e-value: 4.6E-15 score: 57.1
None	No IPR available	PANTHER	PTHR11811:SF51	6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING 3, CHLOROPLASTIC	coord: 6..53
IPR006183	6-phosphogluconate dehydrogenase	PANTHER	PTHR11811	6-PHOSPHOGLUCONATE DEHYDROGENASE	coord: 6..53
IPR008927	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	SUPERFAMILY	48179	6-phosphogluconate dehydrogenase C-terminal domain-like	coord: 7..45

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033034.1	MELO3C033034.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006098	pentose-phosphate shunt
molecular_function	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity