MELO3C033014 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033014
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Ty3-gypsy retrotransposon protein
Location	chr08: 15871457 .. 15872755 (+)
RNA-Seq Expression	MELO3C033014
Synteny	MELO3C033014

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGATCAAAGACTTGGAAGATCGACTTTCCTTCAATTCTAGAAGATTGAAGCTCGAATTGACTTGTAATTACAACTTCTTGAAGATCGAAGACCACGAAGTTCTAAATTTTATTTTTTGTATTCGAGAGAAAGAACCAAAGGAGTAAATATTAGAGATTGTATCCACAATACATAAATCAATACAAAGTTCGATTCTACGAATTAAATCTTTACTGAAATCTCGTGTGAACAATTTGGCACGCCCAGTGGGACCATCTCTACCTTTCATCTCTTTCTCTTTTTTAAGAACATCCAAATAAAATCATGACATCTCAAGGCAACACTTCCAAAGCTCTCAGCGACATTGGCAAGCGACCAAACACTCATAGCCGCTCAAGGGAGATTCAATCATTTGAAGATACGCCACCTTTTGAAGTTGCAAAGAATATTTGGGAGCAAATCTCCAAGCCACCAAAAGGTGGAATTGTAATCAAAGAAAATCCTGTGATTGATGAACACTACTCGTTCTCTAAACCCTTAAGTGAAGAAATGTGTCACCCAAATATAATGTCAATTATGGTAACTGACGTGGATACAAGTGAAAATAGAATGGCGGAGCTTGAAAAGAAGGTGAACATGCTCATGAAGGTGGTTGAAGAAAGGGATTATGAGATTGCATTTCTAAAGAATCACAATGAAAGTCGTGATGCTGCTGGATCAAGTCATAAACATACTATCAACAATACTGACAAAGGGAAGGCAGTTATGCAAGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAATTACAGGAGATGATTGCAAACTCCATCAAAACTCAATATGGTGGACCTGCTCAAAATTTCTCTTTGTACTCCAAACCATATACGAAGAGGATCGACAATCTCAGAATGCTGAATGGATACCAACCTCCCAAGTTCCAACAGTTTGATGGAAAAGGCAACCCAAAACAACATGTTGGTCACTTCATCGAAACATGTGAAACTGCTGGTACGCGAGGAGATTTATTGGTCAAACAGTTCGTTCGAACTCTCAAAGGAAATGCCTTCGACTGGTACATCGATCTGGAGCCTGAATCCATTGATAATTGGGAGCAACTTGAGAGGGACTTTCTCAACTGTTTCTACAGCACCCGACGTATCATCAGCATGATGGAGTTGATAAACACAAGACAACAAAAGGGAGAGCTAGTCATCGACTACATCAACCGATGGAGAGCTCTGAGTCTTGAATGTAAGGATCGACTCACCGAACTGTCTACAATGGAGATGTGCACCTAA

mRNA sequence

GAAAGATCAAAGACTTGGAAGATCGACTTTCCTTCAATTCTAGAAGATTGAAGCTCGAATTGACTTGTAATTACAACTTCTTGAAGATCGAAGACCACGAAGTTCTAAATTTTATTTTTTGTATTCGAGAGAAAGAACCAAAGGAGTAAATATTAGAGATTGTATCCACAATACATAAATCAATACAAAGTTCGATTCTACGAATTAAATCTTTACTGAAATCTCGTGTGAACAATTTGGCACGCCCAGTGGGACCATCTCTACCTTTCATCTCTTTCTCTTTTTTAAGAACATCCAAATAAAATCATGACATCTCAAGGCAACACTTCCAAAGCTCTCAGCGACATTGGCAAGCGACCAAACACTCATAGCCGCTCAAGGGAGATTCAATCATTTGAAGATACGCCACCTTTTGAAGTTGCAAAGAATATTTGGGAGCAAATCTCCAAGCCACCAAAAGGTGGAATTGTAATCAAAGAAAATCCTGTGATTGATGAACACTACTCGTTCTCTAAACCCTTAAGTGAAGAAATGTGTCACCCAAATATAATGTCAATTATGGTAACTGACGTGGATACAAGTGAAAATAGAATGGCGGAGCTTGAAAAGAAGGTGAACATGCTCATGAAGGTGGTTGAAGAAAGGGATTATGAGATTGCATTTCTAAAGAATCACAATGAAAGTCGTGATGCTGCTGGATCAAGTCATAAACATACTATCAACAATACTGACAAAGGGAAGGCAGTTATGCAAGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAATTACAGGAGATGATTGCAAACTCCATCAAAACTCAATATGGTGGACCTGCTCAAAATTTCTCTTTGTACTCCAAACCATATACGAAGAGGATCGACAATCTCAGAATGCTGAATGGATACCAACCTCCCAAGTTCCAACAGTTTGATGGAAAAGGCAACCCAAAACAACATGTTGGTCACTTCATCGAAACATGTGAAACTGCTGGTACGCGAGGAGATTTATTGGTCAAACAGTTCGTTCGAACTCTCAAAGGAAATGCCTTCGACTGGTACATCGATCTGGAGCCTGAATCCATTGATAATTGGGAGCAACTTGAGAGGGACTTTCTCAACTGTTTCTACAGCACCCGACGTATCATCAGCATGATGGAGTTGATAAACACAAGACAACAAAAGGGAGAGCTAGTCATCGACTACATCAACCGATGGAGAGCTCTGAGTCTTGAATGTAAGGATCGACTCACCGAACTGTCTACAATGGAGATGTGCACCTAA

Coding sequence (CDS)

ATGACATCTCAAGGCAACACTTCCAAAGCTCTCAGCGACATTGGCAAGCGACCAAACACTCATAGCCGCTCAAGGGAGATTCAATCATTTGAAGATACGCCACCTTTTGAAGTTGCAAAGAATATTTGGGAGCAAATCTCCAAGCCACCAAAAGGTGGAATTGTAATCAAAGAAAATCCTGTGATTGATGAACACTACTCGTTCTCTAAACCCTTAAGTGAAGAAATGTGTCACCCAAATATAATGTCAATTATGGTAACTGACGTGGATACAAGTGAAAATAGAATGGCGGAGCTTGAAAAGAAGGTGAACATGCTCATGAAGGTGGTTGAAGAAAGGGATTATGAGATTGCATTTCTAAAGAATCACAATGAAAGTCGTGATGCTGCTGGATCAAGTCATAAACATACTATCAACAATACTGACAAAGGGAAGGCAGTTATGCAAGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAATTACAGGAGATGATTGCAAACTCCATCAAAACTCAATATGGTGGACCTGCTCAAAATTTCTCTTTGTACTCCAAACCATATACGAAGAGGATCGACAATCTCAGAATGCTGAATGGATACCAACCTCCCAAGTTCCAACAGTTTGATGGAAAAGGCAACCCAAAACAACATGTTGGTCACTTCATCGAAACATGTGAAACTGCTGGTACGCGAGGAGATTTATTGGTCAAACAGTTCGTTCGAACTCTCAAAGGAAATGCCTTCGACTGGTACATCGATCTGGAGCCTGAATCCATTGATAATTGGGAGCAACTTGAGAGGGACTTTCTCAACTGTTTCTACAGCACCCGACGTATCATCAGCATGATGGAGTTGATAAACACAAGACAACAAAAGGGAGAGCTAGTCATCGACTACATCAACCGATGGAGAGCTCTGAGTCTTGAATGTAAGGATCGACTCACCGAACTGTCTACAATGGAGATGTGCACCTAA

Protein sequence

MTSQGNTSKALSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENPVIDEHYSFSKPLSEEMCHPNIMSIMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFLKNHNESRDAAGSSHKHTINNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYGGPAQNFSLYSKPYTKRIDNLRMLNGYQPPKFQQFDGKGNPKQHVGHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNCFYSTRRIISMMELINTRQQKGELVIDYINRWRALSLECKDRLTELSTMEMCT

Homology

[Close]

BLAST of MELO3C033014 vs. NCBI nr
Match: KAA0045438.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 663.7 bits (1711), Expect = 8.3e-187
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 1   MTSQGNTSKALSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP 60
           MTSQGNTSKALSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHYSFSKPLSEEMCHPNIMSIMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120
           VIDEHYSFSKPLSEEMCHPNIMSIMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL
Sbjct: 61  VIDEHYSFSKPLSEEMCHPNIMSIMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120

Query: 121 KNHNESRDAAGSSHKHTINNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180
           KNHNESRDAAGSSHKHTINNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG
Sbjct: 121 KNHNESRDAAGSSHKHTINNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180

Query: 181 GPAQNFSLYSKPYTKRIDNLRMLNGYQPPKFQQFDGKGNPKQHVGHFIETCETAGTRGDL 240
           GPAQNFSLYSKPYTKRIDNLRMLNGYQPPKFQQFDGKGNPKQHVGHFIETCETAGTRGDL
Sbjct: 181 GPAQNFSLYSKPYTKRIDNLRMLNGYQPPKFQQFDGKGNPKQHVGHFIETCETAGTRGDL 240

Query: 241 LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNCFYSTRRIISMMELINTRQQKGE 300
           LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNCFYSTRRIISMMELINTRQQKGE
Sbjct: 241 LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNCFYSTRRIISMMELINTRQQKGE 300

Query: 301 LVIDYINRWRALSLECKDRLTELSTMEMCT 331
           LVIDYINRWRALSLECKDRLTELSTMEMCT
Sbjct: 301 LVIDYINRWRALSLECKDRLTELSTMEMCT 330

[Close]

BLAST of MELO3C033014 vs. NCBI nr
Match: KAA0060505.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 609.8 bits (1571), Expect = 1.4e-170
Identity = 305/330 (92.42%), Postives = 314/330 (95.15%), Query Frame = 0


Query: 1   MTSQGNTSKALSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP 60
           MTSQGNTSKALSDIGKR NTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP
Sbjct: 1   MTSQGNTSKALSDIGKRSNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHYSFSKPLSEEMCHPNIMSIMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120
            IDEHYS SKP SE+M HPNIMS+MVT+VDTSENRM ELE+KVNMLMKVVEERDYEIAFL
Sbjct: 61  AIDEHYSSSKPSSEKMPHPNIMSVMVTNVDTSENRMVELEEKVNMLMKVVEERDYEIAFL 120

Query: 121 KNHNESRDAAGSSHKHTINNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180
           KNH ESRDAA SSHKHT+ NTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG
Sbjct: 121 KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180

Query: 181 GPAQNFSLYSKPYTKRIDNLRMLNGYQPPKFQQFDGKGNPKQHVGHFIETCETAGTRGDL 240
           GPAQ FSLYSKPYTKRI NLRM NGYQPPKFQQFDGKGNPKQHV HFIETCETAGTRGDL
Sbjct: 181 GPAQTFSLYSKPYTKRITNLRMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDL 240

Query: 241 LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNCFYSTRRIISMMELINTRQQKGE 300
           LVKQFV+TLKGNAFDWYIDLEPESIDNWEQLERDFLN FYSTRRI+SMMEL NTRQQKGE
Sbjct: 241 LVKQFVQTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE 300

Query: 301 LVIDYINRWRALSLECKDRLTELSTMEMCT 331
           LVIDYINRWRALSL+CKDRLTELS +EMCT
Sbjct: 301 LVIDYINRWRALSLDCKDRLTELSAVEMCT 330

[Close]

BLAST of MELO3C033014 vs. NCBI nr
Match: TYK14887.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 605.5 bits (1560), Expect = 2.7e-169
Identity = 305/330 (92.42%), Postives = 312/330 (94.55%), Query Frame = 0


Query: 1   MTSQGNTSKALSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP 60
           MTSQGNTSKALSDIGKRPNT SRSREIQS ED PPFEVAKNIWEQISKPPKGGIVIKEN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENH 60

Query: 61  VIDEHYSFSKPLSEEMCHPNIMSIMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120
            IDEHYS SKP SEEM HPNIMS+MVT+VDTSENRMAELEKKVNMLMKVVEERDYEIAFL
Sbjct: 61  AIDEHYSSSKPSSEEMPHPNIMSVMVTNVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120

Query: 121 KNHNESRDAAGSSHKHTINNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180
           KNH ESRDAA SSHKHT+ NTDKGKAVMQESQPQN TSIASLSVQQLQEMIA+SIKTQYG
Sbjct: 121 KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNLTSIASLSVQQLQEMIASSIKTQYG 180

Query: 181 GPAQNFSLYSKPYTKRIDNLRMLNGYQPPKFQQFDGKGNPKQHVGHFIETCETAGTRGDL 240
           GPAQ FSLYSKPYTKRIDNLRM NGYQPPKFQQFDGKGNPKQHV HFIETCETAGTRGDL
Sbjct: 181 GPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDL 240

Query: 241 LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNCFYSTRRIISMMELINTRQQKGE 300
           LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLN FYSTRRI+SMMEL NTRQQKGE
Sbjct: 241 LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE 300

Query: 301 LVIDYINRWRALSLECKDRLTELSTMEMCT 331
           LVIDYINRWRALSL+CKDRLTELS +EMCT
Sbjct: 301 LVIDYINRWRALSLDCKDRLTELSAVEMCT 330

[Close]

BLAST of MELO3C033014 vs. NCBI nr
Match: TYK28990.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 602.4 bits (1552), Expect = 2.3e-168
Identity = 302/330 (91.52%), Postives = 310/330 (93.94%), Query Frame = 0


Query: 1   MTSQGNTSKALSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP 60
           MTSQGNTSKALSDIGKRPNT SRSREIQSFEDTPPFEV+KNIWEQISKPPKGGIVIK+NP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSFEDTPPFEVSKNIWEQISKPPKGGIVIKKNP 60

Query: 61  VIDEHYSFSKPLSEEMCHPNIMSIMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120
            IDEHYSFS+  SEEM HPNIMS+MVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL
Sbjct: 61  AIDEHYSFSEHSSEEMAHPNIMSVMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120

Query: 121 KNHNESRDAAGSSHKHTINNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180
           KNH ES DAA SSHKHT+ NTDKGK VMQESQPQN  SIASLSVQQLQEMIANSIKTQYG
Sbjct: 121 KNHIESCDAAESSHKHTVKNTDKGKTVMQESQPQNLISIASLSVQQLQEMIANSIKTQYG 180

Query: 181 GPAQNFSLYSKPYTKRIDNLRMLNGYQPPKFQQFDGKGNPKQHVGHFIETCETAGTRGDL 240
           GPAQ FSLYSKPYTKRIDNLRM NGYQPPK QQFDGKGNPKQHV HFIETCETAGTRGDL
Sbjct: 181 GPAQTFSLYSKPYTKRIDNLRMPNGYQPPKIQQFDGKGNPKQHVAHFIETCETAGTRGDL 240

Query: 241 LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNCFYSTRRIISMMELINTRQQKGE 300
           LVKQFVRTLKGNAFDWYIDLE ESIDNWEQLERDFLN FYSTRRI+SMMEL NTRQQKGE
Sbjct: 241 LVKQFVRTLKGNAFDWYIDLESESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE 300

Query: 301 LVIDYINRWRALSLECKDRLTELSTMEMCT 331
           LVIDYINRWRALSL+CKDRLTELS +EMCT
Sbjct: 301 LVIDYINRWRALSLDCKDRLTELSAVEMCT 330

[Close]

BLAST of MELO3C033014 vs. NCBI nr
Match: KAA0037441.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 602.4 bits (1552), Expect = 2.3e-168
Identity = 303/330 (91.82%), Postives = 311/330 (94.24%), Query Frame = 0


Query: 1   MTSQGNTSKALSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP 60
           MTSQGNTSKALSDIGKRPNT SRSREIQS ED PPFEVAKNIWEQISKPPKGGIVIKEN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENH 60

Query: 61  VIDEHYSFSKPLSEEMCHPNIMSIMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120
            IDEHYS SKP SEEM HPNIMS+MVT+VDTSENRMAELEKKVNMLMKVVEERDYEIAFL
Sbjct: 61  AIDEHYSSSKPSSEEMPHPNIMSVMVTNVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120

Query: 121 KNHNESRDAAGSSHKHTINNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180
           KNH ES DAA SSHKHT+ NTDKGKAVMQESQPQNSTSIASLSVQQLQEMIA+SIKTQYG
Sbjct: 121 KNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYG 180

Query: 181 GPAQNFSLYSKPYTKRIDNLRMLNGYQPPKFQQFDGKGNPKQHVGHFIETCETAGTRGDL 240
           GPAQ FSLYSKPYTKRIDNLRM NGYQPP FQQFDGKGNPKQHV HFIETCETAGTRGDL
Sbjct: 181 GPAQTFSLYSKPYTKRIDNLRMPNGYQPPNFQQFDGKGNPKQHVAHFIETCETAGTRGDL 240

Query: 241 LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNCFYSTRRIISMMELINTRQQKGE 300
           LVKQF+RTLKGNAFDWYIDLEPESIDNWEQLERDFLN FYSTRRI+SMMEL NTRQQKGE
Sbjct: 241 LVKQFIRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE 300

Query: 301 LVIDYINRWRALSLECKDRLTELSTMEMCT 331
           LVIDYINRWRALSL+CKDRLTELS +EMCT
Sbjct: 301 LVIDYINRWRALSLDCKDRLTELSAVEMCT 330

[Close]

BLAST of MELO3C033014 vs. ExPASy TrEMBL
Match: A0A5A7TRF4 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold294G00370 PE=4 SV=1)

HSP 1 Score: 663.7 bits (1711), Expect = 4.0e-187
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 1   MTSQGNTSKALSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP 60
           MTSQGNTSKALSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHYSFSKPLSEEMCHPNIMSIMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120
           VIDEHYSFSKPLSEEMCHPNIMSIMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL
Sbjct: 61  VIDEHYSFSKPLSEEMCHPNIMSIMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120

Query: 121 KNHNESRDAAGSSHKHTINNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180
           KNHNESRDAAGSSHKHTINNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG
Sbjct: 121 KNHNESRDAAGSSHKHTINNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180

Query: 181 GPAQNFSLYSKPYTKRIDNLRMLNGYQPPKFQQFDGKGNPKQHVGHFIETCETAGTRGDL 240
           GPAQNFSLYSKPYTKRIDNLRMLNGYQPPKFQQFDGKGNPKQHVGHFIETCETAGTRGDL
Sbjct: 181 GPAQNFSLYSKPYTKRIDNLRMLNGYQPPKFQQFDGKGNPKQHVGHFIETCETAGTRGDL 240

Query: 241 LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNCFYSTRRIISMMELINTRQQKGE 300
           LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNCFYSTRRIISMMELINTRQQKGE
Sbjct: 241 LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNCFYSTRRIISMMELINTRQQKGE 300

Query: 301 LVIDYINRWRALSLECKDRLTELSTMEMCT 331
           LVIDYINRWRALSLECKDRLTELSTMEMCT
Sbjct: 301 LVIDYINRWRALSLECKDRLTELSTMEMCT 330

[Close]

BLAST of MELO3C033014 vs. ExPASy TrEMBL
Match: A0A5A7V3R7 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G003520 PE=4 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 6.9e-171
Identity = 305/330 (92.42%), Postives = 314/330 (95.15%), Query Frame = 0


Query: 1   MTSQGNTSKALSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP 60
           MTSQGNTSKALSDIGKR NTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP
Sbjct: 1   MTSQGNTSKALSDIGKRSNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHYSFSKPLSEEMCHPNIMSIMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120
            IDEHYS SKP SE+M HPNIMS+MVT+VDTSENRM ELE+KVNMLMKVVEERDYEIAFL
Sbjct: 61  AIDEHYSSSKPSSEKMPHPNIMSVMVTNVDTSENRMVELEEKVNMLMKVVEERDYEIAFL 120

Query: 121 KNHNESRDAAGSSHKHTINNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180
           KNH ESRDAA SSHKHT+ NTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG
Sbjct: 121 KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180

Query: 181 GPAQNFSLYSKPYTKRIDNLRMLNGYQPPKFQQFDGKGNPKQHVGHFIETCETAGTRGDL 240
           GPAQ FSLYSKPYTKRI NLRM NGYQPPKFQQFDGKGNPKQHV HFIETCETAGTRGDL
Sbjct: 181 GPAQTFSLYSKPYTKRITNLRMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDL 240

Query: 241 LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNCFYSTRRIISMMELINTRQQKGE 300
           LVKQFV+TLKGNAFDWYIDLEPESIDNWEQLERDFLN FYSTRRI+SMMEL NTRQQKGE
Sbjct: 241 LVKQFVQTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE 300

Query: 301 LVIDYINRWRALSLECKDRLTELSTMEMCT 331
           LVIDYINRWRALSL+CKDRLTELS +EMCT
Sbjct: 301 LVIDYINRWRALSLDCKDRLTELSAVEMCT 330

[Close]

BLAST of MELO3C033014 vs. ExPASy TrEMBL
Match: A0A5D3CSH0 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2047G00190 PE=4 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 1.3e-169
Identity = 305/330 (92.42%), Postives = 312/330 (94.55%), Query Frame = 0


Query: 1   MTSQGNTSKALSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP 60
           MTSQGNTSKALSDIGKRPNT SRSREIQS ED PPFEVAKNIWEQISKPPKGGIVIKEN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENH 60

Query: 61  VIDEHYSFSKPLSEEMCHPNIMSIMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120
            IDEHYS SKP SEEM HPNIMS+MVT+VDTSENRMAELEKKVNMLMKVVEERDYEIAFL
Sbjct: 61  AIDEHYSSSKPSSEEMPHPNIMSVMVTNVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120

Query: 121 KNHNESRDAAGSSHKHTINNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180
           KNH ESRDAA SSHKHT+ NTDKGKAVMQESQPQN TSIASLSVQQLQEMIA+SIKTQYG
Sbjct: 121 KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNLTSIASLSVQQLQEMIASSIKTQYG 180

Query: 181 GPAQNFSLYSKPYTKRIDNLRMLNGYQPPKFQQFDGKGNPKQHVGHFIETCETAGTRGDL 240
           GPAQ FSLYSKPYTKRIDNLRM NGYQPPKFQQFDGKGNPKQHV HFIETCETAGTRGDL
Sbjct: 181 GPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDL 240

Query: 241 LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNCFYSTRRIISMMELINTRQQKGE 300
           LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLN FYSTRRI+SMMEL NTRQQKGE
Sbjct: 241 LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE 300

Query: 301 LVIDYINRWRALSLECKDRLTELSTMEMCT 331
           LVIDYINRWRALSL+CKDRLTELS +EMCT
Sbjct: 301 LVIDYINRWRALSLDCKDRLTELSAVEMCT 330

[Close]

BLAST of MELO3C033014 vs. ExPASy TrEMBL
Match: A0A5A7T777 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G00260 PE=4 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 1.1e-168
Identity = 303/330 (91.82%), Postives = 311/330 (94.24%), Query Frame = 0


Query: 1   MTSQGNTSKALSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP 60
           MTSQGNTSKALSDIGKRPNT SRSREIQS ED PPFEVAKNIWEQISKPPKGGIVIKEN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENH 60

Query: 61  VIDEHYSFSKPLSEEMCHPNIMSIMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120
            IDEHYS SKP SEEM HPNIMS+MVT+VDTSENRMAELEKKVNMLMKVVEERDYEIAFL
Sbjct: 61  AIDEHYSSSKPSSEEMPHPNIMSVMVTNVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120

Query: 121 KNHNESRDAAGSSHKHTINNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180
           KNH ES DAA SSHKHT+ NTDKGKAVMQESQPQNSTSIASLSVQQLQEMIA+SIKTQYG
Sbjct: 121 KNHIESCDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYG 180

Query: 181 GPAQNFSLYSKPYTKRIDNLRMLNGYQPPKFQQFDGKGNPKQHVGHFIETCETAGTRGDL 240
           GPAQ FSLYSKPYTKRIDNLRM NGYQPP FQQFDGKGNPKQHV HFIETCETAGTRGDL
Sbjct: 181 GPAQTFSLYSKPYTKRIDNLRMPNGYQPPNFQQFDGKGNPKQHVAHFIETCETAGTRGDL 240

Query: 241 LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNCFYSTRRIISMMELINTRQQKGE 300
           LVKQF+RTLKGNAFDWYIDLEPESIDNWEQLERDFLN FYSTRRI+SMMEL NTRQQKGE
Sbjct: 241 LVKQFIRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE 300

Query: 301 LVIDYINRWRALSLECKDRLTELSTMEMCT 331
           LVIDYINRWRALSL+CKDRLTELS +EMCT
Sbjct: 301 LVIDYINRWRALSLDCKDRLTELSAVEMCT 330

[Close]

BLAST of MELO3C033014 vs. ExPASy TrEMBL
Match: A0A5D3E0F3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G00900 PE=4 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 1.1e-168
Identity = 302/330 (91.52%), Postives = 310/330 (93.94%), Query Frame = 0


Query: 1   MTSQGNTSKALSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENP 60
           MTSQGNTSKALSDIGKRPNT SRSREIQSFEDTPPFEV+KNIWEQISKPPKGGIVIK+NP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSFEDTPPFEVSKNIWEQISKPPKGGIVIKKNP 60

Query: 61  VIDEHYSFSKPLSEEMCHPNIMSIMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120
            IDEHYSFS+  SEEM HPNIMS+MVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL
Sbjct: 61  AIDEHYSFSEHSSEEMAHPNIMSVMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFL 120

Query: 121 KNHNESRDAAGSSHKHTINNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180
           KNH ES DAA SSHKHT+ NTDKGK VMQESQPQN  SIASLSVQQLQEMIANSIKTQYG
Sbjct: 121 KNHIESCDAAESSHKHTVKNTDKGKTVMQESQPQNLISIASLSVQQLQEMIANSIKTQYG 180

Query: 181 GPAQNFSLYSKPYTKRIDNLRMLNGYQPPKFQQFDGKGNPKQHVGHFIETCETAGTRGDL 240
           GPAQ FSLYSKPYTKRIDNLRM NGYQPPK QQFDGKGNPKQHV HFIETCETAGTRGDL
Sbjct: 181 GPAQTFSLYSKPYTKRIDNLRMPNGYQPPKIQQFDGKGNPKQHVAHFIETCETAGTRGDL 240

Query: 241 LVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNCFYSTRRIISMMELINTRQQKGE 300
           LVKQFVRTLKGNAFDWYIDLE ESIDNWEQLERDFLN FYSTRRI+SMMEL NTRQQKGE
Sbjct: 241 LVKQFVRTLKGNAFDWYIDLESESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE 300

Query: 301 LVIDYINRWRALSLECKDRLTELSTMEMCT 331
           LVIDYINRWRALSL+CKDRLTELS +EMCT
Sbjct: 301 LVIDYINRWRALSLDCKDRLTELSAVEMCT 330

The following BLAST results are available for this feature:

BLAST of MELO3C033014 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045438.1	8.3e-187	100.00	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0060505.1	1.4e-170	92.42	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK14887.1	2.7e-169	92.42	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK28990.1	2.3e-168	91.52	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0037441.1	2.3e-168	91.82	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C033014 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C033014 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRF4	4.0e-187	100.00	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7V3R7	6.9e-171	92.42	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3CSH0	1.3e-169	92.42	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T777	1.1e-168	91.82	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3E0F3	1.1e-168	91.52	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of MELO3C033014 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR33223	FAMILY NOT NAMED	coord: 125..322
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 245..328 e-value: 4.0E-8 score: 33.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033014.1	MELO3C033014.1	mRNA