MELO3C032992 (gene) Melon (DHL92) v4

Overview


Name	MELO3C032992
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	transmembrane protein 208 homolog
Location	chr08: 13486467 .. 13487860 (-)
RNA-Seq Expression	MELO3C032992
Synteny	MELO3C032992

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACGCCAACCTATGGTGATGACGGTGAACTTCTAGATGGTGGATTTGATATGAGTACTGGTGGAATTTGTAGGTATGTCTTCTTTCTTCTTAATGTATAACCATTACATGTTAGTTTCATGCATGTTTTTATCTCCATTACATAAAGTATAATTGTTGAGTATAGACCTGGCATATTTAATTGTTCTGTGACCCAAGTTTAAGATGAGCGGTTGCTCTGAAACTTGCTAAGAATTGGTATGAAATTGTTCACCAAATATCAAATTTCATGAGGAAGCTGAAGCTATTTTTCTTGATCGTCATTCTAAAATTCAGTCTAAAATGCTTGAAATGGAAGAAACTAATGATTTGCTTGGCCTAACTCTCATTTCTTCCCACTCTTCAAAAGCCCAGCATCTTTAAAGTTAGCCCTTTTGTTGGGCCTTGGTTCTACGATCTCTGGGTGCTTTTTTCTTCTTCCTTCATATTTTAAATATTGGCCATATCAACCTAAAATTGTGGCATATTATTCTATTTCAGTTTCCTCTGTCGTTATCATTTCCTTTTCGCCTGAATTTCATTACTAAATTGACTTTAATTTACATAATTATAAATTGATATTTAGTATAATTGTCTACTGGCTTAATAACTCTCCATGAGGGCAATATACACAAAAATCACGGTTGTTTAGTCATTTGCCTTACTGGATCTTTCAATTTCTTTCTTGAACTTATTTCAAATTGGATAGTGATATATAAGTAAGCTTGCAGCTTCAAAAGGAATAGGCTTATTGGGTTTTTAAGTTTTCTGGGAAATGGTTCTGCTCCACTTGTTGTTTTGATCAATTGATGTGTTTATCATCACCAATGTGACAGAACAATTCCATGGTAATGTTTTTGGCCTACATAATATTGAGTGGTTTTATGTGGGATTTTTCCATTGAGTGGCAAAGGTAGTGTTTATAATATGGATGAAGTAATTGAAAGGAACAGATGACTTTTCAGTCTCTTTTTTTTCTTTTAATCGTTTTATGAACCTTGTTCTGTCGCCATCTTTTTTTTGGTGTAAAACTAAGCATCTCTTCTCTCATTTCAACCTTTCTTTTTTAGTCAGTAATTGGTGATCTCTTATGTAACAAGCTTTTGCTGTTCGTGGCTCTTCCTTATTCTTTTGCCAAAAAAAATTATGGATTGACTTTAAAAAAGAGGTTGGAATCCAATATAGCTAGCCTTCCATCTGTCAACGATTTTTTGACATTTCAATAACTAATCGAAACATCTTGATGGTTTTTCTTGTTTTTTGCAACTACATGCATGATGTGATCTATATTACAAGCTTTGTGCAAATATCGTCAATCCTCTCCGGAAAGTTTTAGTACACCTACCTTGTGGTAAGGTCTATTCACTTTTGA

mRNA sequence

ATGGCAACGCCAACCTATGGTGATGACGGTGAACTTCTAGATGGTGGATTTGATATGAGTACTGGTGGAATTTGTAGCTACATGCATGATGTGATCTATATTACAAGCTTTGTGCAAATATCGTCAATCCTCTCCGGAAAGTTTTAGTACACCTACCTTGTGGTAAGGTCTATTCACTTTTGA

Coding sequence (CDS)

ATGGCAACGCCAACCTATGGTGATGACGGTGAACTTCTAGATGGTGGATTTGATATGAGTACTGGTGGAATTTGTAGCTACATGCATGATGTGATCTATATTACAAGCTTTGTGCAAATATCGTCAATCCTCTCCGGAAAGTTTTAG

Protein sequence

MATPTYGDDGELLDGGFDMSTGGICSYMHDVIYITSFVQISSILSGKF

Homology

[Close]

BLAST of MELO3C032992 vs. NCBI nr
Match: XP_022946520.1 (transmembrane protein 208 homolog [Cucurbita moschata] >XP_022999772.1 transmembrane protein 208 homolog [Cucurbita maxima] >KAG6599131.1 Transmembrane protein 208, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030072.1 Transmembrane protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 95.9 bits (237), Expect = 1.0e-16
Identity = 45/48 (93.75%), Postives = 45/48 (93.75%), Query Frame = 0


Query: 1   MATPTYGDDGELLDGGFDMSTGGICSYMHDVIYITSFVQISSILSGKF 49
           MA PTYGDDGELLDGGFDMSTGGIC YMHDVIYITSFVQI SILSGKF
Sbjct: 68  MADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKF 115

[Close]

BLAST of MELO3C032992 vs. NCBI nr
Match: XP_038889500.1 (transmembrane protein 208 homolog [Benincasa hispida])

HSP 1 Score: 95.1 bits (235), Expect = 1.7e-16
Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 0


Query: 1   MATPTYGDDGELLDGGFDMSTGGICSYMHDVIYITSFVQISSILSGKF 49
           MA PTYGDDGELLDGGFDMSTGGIC Y+HDVIYITSFVQI SILSGKF
Sbjct: 68  MANPTYGDDGELLDGGFDMSTGGICGYLHDVIYITSFVQIMSILSGKF 115

[Close]

BLAST of MELO3C032992 vs. NCBI nr
Match: XP_021818858.1 (transmembrane protein 208 homolog [Prunus avium] >XP_021818859.1 transmembrane protein 208 homolog [Prunus avium] >XP_021818860.1 transmembrane protein 208 homolog [Prunus avium])

HSP 1 Score: 94.0 bits (232), Expect = 3.8e-16
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 0


Query: 1   MATPTYGDDGELLDGGFDMSTGGICSYMHDVIYITSFVQISSILSGKF 49
           MATP+YGDDGELLDGGFDM+TGG+C YMHDVIYITSFVQ+ SI+SGKF
Sbjct: 68  MATPSYGDDGELLDGGFDMTTGGVCGYMHDVIYITSFVQVMSIISGKF 115

[Close]

BLAST of MELO3C032992 vs. NCBI nr
Match: BBG92956.1 (Protein of unknown function D [Prunus dulcis])

HSP 1 Score: 94.0 bits (232), Expect = 3.8e-16
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 0


Query: 1   MATPTYGDDGELLDGGFDMSTGGICSYMHDVIYITSFVQISSILSGKF 49
           MATP+YGDDGELLDGGFDM+TGG+C YMHDVIYITSFVQ+ SI+SGKF
Sbjct: 113 MATPSYGDDGELLDGGFDMTTGGVCGYMHDVIYITSFVQVMSIISGKF 160

[Close]

BLAST of MELO3C032992 vs. NCBI nr
Match: XP_022153357.1 (transmembrane protein 208 homolog [Momordica charantia])

HSP 1 Score: 94.0 bits (232), Expect = 3.8e-16
Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 0


Query: 1   MATPTYGDDGELLDGGFDMSTGGICSYMHDVIYITSFVQISSILSGKF 49
           MA PTYGDDGELLDGGFDMSTGGIC Y+HDVIYITSFVQI SI+SGKF
Sbjct: 68  MANPTYGDDGELLDGGFDMSTGGICGYLHDVIYITSFVQIMSIVSGKF 115

[Close]

BLAST of MELO3C032992 vs. ExPASy Swiss-Prot
Match: Q6NYP0 (Transmembrane protein 208 OS=Danio rerio OX=7955 GN=tmem208 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 1.6e-04
Identity = 22/49 (44.90%), Postives = 32/49 (65.31%), Query Frame = 0


Query: 1   MATPTYGDDGELLDGGFDMS-TGGICSYMHDVIYITSFVQISSILSGKF 49
           MA P + +DG LLDGG D++   G+  ++ DVI +T+ VQ+ S LS  F
Sbjct: 74  MAKPAFAEDGSLLDGGIDLNMEQGMAEHLKDVILLTAIVQVLSTLSSYF 122

[Close]

BLAST of MELO3C032992 vs. ExPASy Swiss-Prot
Match: Q54UB0 (Transmembrane protein 208 homolog OS=Dictyostelium discoideum OX=44689 GN=tmem208 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 1.6e-04
Identity = 19/47 (40.43%), Postives = 30/47 (63.83%), Query Frame = 0


Query: 1   MATPTYGDDGELLDGGFDMSTGGICSYMHDVIYITSFVQISSILSGK 48
           M   TY ++GEL+DGG D++ GG+  Y  D+IY+   +Q   ++S K
Sbjct: 68  MCKLTYDNNGELIDGGSDLNQGGMTEYYFDIIYVCCIIQGLGLISDK 114

[Close]

BLAST of MELO3C032992 vs. ExPASy TrEMBL
Match: A0A6J1KBQ8 (transmembrane protein 208 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494021 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.9e-17
Identity = 45/48 (93.75%), Postives = 45/48 (93.75%), Query Frame = 0


Query: 1   MATPTYGDDGELLDGGFDMSTGGICSYMHDVIYITSFVQISSILSGKF 49
           MA PTYGDDGELLDGGFDMSTGGIC YMHDVIYITSFVQI SILSGKF
Sbjct: 68  MADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKF 115

[Close]

BLAST of MELO3C032992 vs. ExPASy TrEMBL
Match: A0A6J1G433 (transmembrane protein 208 homolog OS=Cucurbita moschata OX=3662 GN=LOC111450556 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.9e-17
Identity = 45/48 (93.75%), Postives = 45/48 (93.75%), Query Frame = 0


Query: 1   MATPTYGDDGELLDGGFDMSTGGICSYMHDVIYITSFVQISSILSGKF 49
           MA PTYGDDGELLDGGFDMSTGGIC YMHDVIYITSFVQI SILSGKF
Sbjct: 68  MADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKF 115

[Close]

BLAST of MELO3C032992 vs. ExPASy TrEMBL
Match: A0A6J5TGQ5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS1616 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-16
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 0


Query: 1   MATPTYGDDGELLDGGFDMSTGGICSYMHDVIYITSFVQISSILSGKF 49
           MATP+YGDDGELLDGGFDM+TGG+C YMHDVIYITSFVQ+ SI+SGKF
Sbjct: 68  MATPSYGDDGELLDGGFDMTTGGVCGYMHDVIYITSFVQVMSIISGKF 115

[Close]

BLAST of MELO3C032992 vs. ExPASy TrEMBL
Match: A0A6P5SPT9 (transmembrane protein 208 homolog OS=Prunus avium OX=42229 GN=LOC110760835 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-16
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 0


Query: 1   MATPTYGDDGELLDGGFDMSTGGICSYMHDVIYITSFVQISSILSGKF 49
           MATP+YGDDGELLDGGFDM+TGG+C YMHDVIYITSFVQ+ SI+SGKF
Sbjct: 68  MATPSYGDDGELLDGGFDMTTGGVCGYMHDVIYITSFVQVMSIISGKF 115

[Close]

BLAST of MELO3C032992 vs. ExPASy TrEMBL
Match: A0A314Z683 (Transmembrane protein 208 homolog OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_30814 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-16
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 0


Query: 1   MATPTYGDDGELLDGGFDMSTGGICSYMHDVIYITSFVQISSILSGKF 49
           MATP+YGDDGELLDGGFDM+TGG+C YMHDVIYITSFVQ+ SI+SGKF
Sbjct: 68  MATPSYGDDGELLDGGFDMTTGGVCGYMHDVIYITSFVQVMSIISGKF 115

[Close]

BLAST of MELO3C032992 vs. TAIR 10
Match: AT2G23940.1 (Protein of unknown function (DUF788) )

HSP 1 Score: 81.3 bits (199), Expect = 2.4e-16
Identity = 35/48 (72.92%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 1   MATPTYGDDGELLDGGFDMSTGGICSYMHDVIYITSFVQISSILSGKF 49
           MA P+  DDGEL+DGGFDM+TGGIC Y+HDVIYIT FVQ++SI++GKF
Sbjct: 68  MAKPSVTDDGELIDGGFDMTTGGICGYLHDVIYITCFVQLASIITGKF 115

[Close]

BLAST of MELO3C032992 vs. TAIR 10
Match: AT4G30500.1 (Protein of unknown function (DUF788) )

HSP 1 Score: 77.0 bits (188), Expect = 4.5e-15
Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 1   MATPTYGDDGELLDGGFDMSTGGICSYMHDVIYITSFVQISSILSGKF 49
           MA P+  D GELLDGGFDMST G+C Y+HDV+YIT FVQ+ SI+SGKF
Sbjct: 68  MAKPSVSDAGELLDGGFDMSTPGMCGYLHDVLYITCFVQVGSIISGKF 115

The following BLAST results are available for this feature:

BLAST of MELO3C032992 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946520.1	1.0e-16	93.75	transmembrane protein 208 homolog [Cucurbita moschata] >XP_022999772.1 transmemb...	[more]
XP_038889500.1	1.7e-16	91.67	transmembrane protein 208 homolog [Benincasa hispida]	[more]
XP_021818858.1	3.8e-16	85.42	transmembrane protein 208 homolog [Prunus avium] >XP_021818859.1 transmembrane p...	[more]
BBG92956.1	3.8e-16	85.42	Protein of unknown function D [Prunus dulcis]	[more]
XP_022153357.1	3.8e-16	89.58	transmembrane protein 208 homolog [Momordica charantia]	[more]

BLAST of MELO3C032992 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NYP0	1.6e-04	44.90	Transmembrane protein 208 OS=Danio rerio OX=7955 GN=tmem208 PE=2 SV=1	[more]
Q54UB0	1.6e-04	40.43	Transmembrane protein 208 homolog OS=Dictyostelium discoideum OX=44689 GN=tmem20...	[more]

BLAST of MELO3C032992 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KBQ8	4.9e-17	93.75	transmembrane protein 208 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494021 PE...	[more]
A0A6J1G433	4.9e-17	93.75	transmembrane protein 208 homolog OS=Cucurbita moschata OX=3662 GN=LOC111450556 ...	[more]
A0A6J5TGQ5	1.9e-16	85.42	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS1616 PE=3 SV...	[more]
A0A6P5SPT9	1.9e-16	85.42	transmembrane protein 208 homolog OS=Prunus avium OX=42229 GN=LOC110760835 PE=3 ...	[more]
A0A314Z683	1.9e-16	85.42	Transmembrane protein 208 homolog OS=Prunus yedoensis var. nudiflora OX=2094558 ...	[more]

BLAST of MELO3C032992 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23940.1	2.4e-16	72.92	Protein of unknown function (DUF788)	[more]
AT4G30500.1	4.5e-15	70.83	Protein of unknown function (DUF788)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008506	SRP-independent targeting protein 2/TMEM208	PFAM	PF05620	TMEM208_SND2	coord: 1..48 e-value: 2.4E-16 score: 60.0
IPR008506	SRP-independent targeting protein 2/TMEM208	PANTHER	PTHR13505	TRANSMEMBRANE PROTEIN 208	coord: 1..48
None	No IPR available	PANTHER	PTHR13505:SF8	BNAA01G06570D PROTEIN	coord: 1..48

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032992.1	MELO3C032992.1	mRNA