MELO3C032988 (gene) Melon (DHL92) v4

Overview


Name	MELO3C032988
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Serine/threonine-protein phosphatase 7 long form-like protein
Location	chr09: 14496837 .. 14497166 (+)
RNA-Seq Expression	MELO3C032988
Synteny	MELO3C032988

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGATTAGTCCTCTCATATGTTTCTACATTGGTGAGTGGCATCATCCTGATAGAGTACTTAGACAGTTCGGTATTCAACAAGTTGTTCCACGTGACTGTAATACTGAACCACTGTTGCACAACATTGACCTGAGGACTGCTGATTGGTCAGATAGAGTTGCTCATTTAGTGATGTGATGGCATAATCGCAGAAGGTTTACTGCTACGGGACCTCCAATTGAGCAGTTTGATATGGATGTAACTCAAGAAAACATCCATTGGTACAAAAACATTAGCAAGCTCTATATCACCCAACCGGGAGCTGCTATGAGTCATCTGGTATACATTTAA

mRNA sequence

ACGATTAGTCCTCTCATATGTTTCTACATTGGTGAGTGGCATCATCCTGATAGAGTACTTAGACAGTTCGGTATTCAACAAGTTGTTCCACGTGACTGTAATACTGAACCACTGTTGCACAACATTGACCTGAGGACTGCTGATTGGTCAGATAGAGTTGCTCATTTAGTGATGTGATGGCATAATCGCAGAAGGTTTACTGCTACGGGACCTCCAATTGAGCAGTTTGATATGGATGTAACTCAAGAAAACATCCATTGGTACAAAAACATTAGCAAGCTCTATATCACCCAACCGGGAGCTGCTATGAGTCATCTGGTATACATTTAA

Coding sequence (CDS)

ACGATTAGTCCTCTCATATGTTTCTACATTGGTGAGTGGCATCATCCTGATAGAGTACTTAGACAGTTCGGTATTCAACAAGTTGTTCCACGTGACTGTAATACTGAACCACTGTTGCACAACATTGACCTGAGGACTGCTGATTGGTCAGATAGAGTTGCTCATTTAGTGATGTGA

Protein sequence

TISPLICFYIGEWHHPDRVLRQFGIQQVVPRDCNTEPLLHNIDLRTADWSDRVAHLVM

Homology

[Close]

BLAST of MELO3C032988 vs. NCBI nr
Match: KAA0036767.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 131.3 bits (329), Expect = 2.6e-27
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0


Query: 1   TISPLICFYIGEWHHPDRVLRQFGIQQVVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 59
           TISPLICFYIGEWHHPDRVLRQFGIQQ VPRDCNTEPLLHNIDLRTADWSDRVAHLVM
Sbjct: 196 TISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 253

[Close]

BLAST of MELO3C032988 vs. NCBI nr
Match: KAA0055624.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 131.3 bits (329), Expect = 2.6e-27
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0


Query: 1   TISPLICFYIGEWHHPDRVLRQFGIQQVVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 59
           TISPLICFYIGEWHHPDRVLRQFGIQQ VPRDCNTEPLLHNIDLRTADWSDRVAHLVM
Sbjct: 493 TISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 550

[Close]

BLAST of MELO3C032988 vs. NCBI nr
Match: KAA0067080.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 131.3 bits (329), Expect = 2.6e-27
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0


Query: 1   TISPLICFYIGEWHHPDRVLRQFGIQQVVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 59
           TISPLICFYIGEWHHPDRVLRQFGIQQ VPRDCNTEPLLHNIDLRTADWSDRVAHLVM
Sbjct: 309 TISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 366

[Close]

BLAST of MELO3C032988 vs. NCBI nr
Match: TYJ95836.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 131.3 bits (329), Expect = 2.6e-27
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0


Query: 1    TISPLICFYIGEWHHPDRVLRQFGIQQVVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 59
            TISPLICFYIGEWHHPDRVLRQFGIQQ VPRDCNTEPLLHNIDLRTADWSDRVAHLVM
Sbjct: 957  TISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 1014

[Close]

BLAST of MELO3C032988 vs. NCBI nr
Match: XP_008463092.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo])

HSP 1 Score: 128.3 bits (321), Expect = 2.2e-26
Identity = 56/58 (96.55%), Postives = 56/58 (96.55%), Query Frame = 0


Query: 1  TISPLICFYIGEWHHPDRVLRQFGIQQVVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 59
          TISPLICFYIGEWHHPDRVLRQFGIQQVVP DCNTEPLLHNIDLRT DWSDRVAHLVM
Sbjct: 35 TISPLICFYIGEWHHPDRVLRQFGIQQVVPCDCNTEPLLHNIDLRTTDWSDRVAHLVM 92

[Close]

BLAST of MELO3C032988 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.5e-12
Identity = 31/55 (56.36%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 1   TISPLICFYIGEWHHPDRVLRQFGIQQVVPRDCNTEPLLHNIDLR---TADWSDR 53
           T++PLICF + EWH PDRVLRQFG+ Q +P  C+ E  LH ID R     DWS R
Sbjct: 345 TVAPLICFDVVEWHRPDRVLRQFGLHQTIPAPCDNEKALHAIDKRGKSEYDWSAR 399

[Close]

BLAST of MELO3C032988 vs. ExPASy TrEMBL
Match: A0A5A7UKC7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G001140 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-27
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0


Query: 1   TISPLICFYIGEWHHPDRVLRQFGIQQVVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 59
           TISPLICFYIGEWHHPDRVLRQFGIQQ VPRDCNTEPLLHNIDLRTADWSDRVAHLVM
Sbjct: 493 TISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 550

[Close]

BLAST of MELO3C032988 vs. ExPASy TrEMBL
Match: A0A5A7VIP6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001330 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-27
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0


Query: 1   TISPLICFYIGEWHHPDRVLRQFGIQQVVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 59
           TISPLICFYIGEWHHPDRVLRQFGIQQ VPRDCNTEPLLHNIDLRTADWSDRVAHLVM
Sbjct: 309 TISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 366

[Close]

BLAST of MELO3C032988 vs. ExPASy TrEMBL
Match: A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-27
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0


Query: 1    TISPLICFYIGEWHHPDRVLRQFGIQQVVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 59
            TISPLICFYIGEWHHPDRVLRQFGIQQ VPRDCNTEPLLHNIDLRTADWSDRVAHLVM
Sbjct: 957  TISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 1014

[Close]

BLAST of MELO3C032988 vs. ExPASy TrEMBL
Match: A0A5A7T598 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00500 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-27
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0


Query: 1   TISPLICFYIGEWHHPDRVLRQFGIQQVVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 59
           TISPLICFYIGEWHHPDRVLRQFGIQQ VPRDCNTEPLLHNIDLRTADWSDRVAHLVM
Sbjct: 196 TISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 253

[Close]

BLAST of MELO3C032988 vs. ExPASy TrEMBL
Match: A0A5A7SUU1 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G00870 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-26
Identity = 56/58 (96.55%), Postives = 56/58 (96.55%), Query Frame = 0


Query: 1   TISPLICFYIGEWHHPDRVLRQFGIQQVVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 59
           TISPLICFYIGEWHHPDRVLRQFGIQQVVP DCNTEPLLHNIDLRT DWSDRVAHLVM
Sbjct: 334 TISPLICFYIGEWHHPDRVLRQFGIQQVVPCDCNTEPLLHNIDLRTTDWSDRVAHLVM 391

[Close]

BLAST of MELO3C032988 vs. TAIR 10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )

HSP 1 Score: 72.0 bits (175), Expect = 1.8e-13
Identity = 31/55 (56.36%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 1   TISPLICFYIGEWHHPDRVLRQFGIQQVVPRDCNTEPLLHNIDLR---TADWSDR 53
           T++PLICF + EWH PDRVLRQFG+ Q +P  C+ E  LH ID R     DWS R
Sbjct: 345 TVAPLICFDVVEWHRPDRVLRQFGLHQTIPAPCDNEKALHAIDKRGKSEYDWSAR 399

[Close]

BLAST of MELO3C032988 vs. TAIR 10
Match: AT2G25010.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 42.0 bits (97), Expect = 1.9e-04
Identity = 21/61 (34.43%), Postives = 33/61 (54.10%), Query Frame = 0


Query: 5   LICFYIGEWHHPDRVLRQFGIQQVVP--------RDCNTEPLLHNIDLRTADWSDRVAHL 58
           L+CF   E H PDR LRQFG +Q +P        ++   + L  ++ L   +W++R  H+
Sbjct: 327 LVCFEKIELHFPDRCLRQFGKRQPIPLKVKRRDRKNRRLDDLDTSMSLACEEWAERGDHI 386

[Close]

BLAST of MELO3C032988 vs. TAIR 10
Match: AT1G17930.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 41.2 bits (95), Expect = 3.3e-04
Identity = 18/54 (33.33%), Postives = 30/54 (55.56%), Query Frame = 0


Query: 12  EWHHPDRVLRQFGIQQVVPRDC--------NTEPLLHNIDLRTADWSDRVAHLV 58
           EWH PDR ++QFG+ QV+P +         + E LL +++    +W  R  ++V
Sbjct: 323 EWHFPDRCMKQFGLCQVIPGEVPPRKNEKNHDEDLLEDMNTADEEWMRRRENIV 376

The following BLAST results are available for this feature:

BLAST of MELO3C032988 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036767.1	2.6e-27	98.28	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0055624.1	2.6e-27	98.28	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0067080.1	2.6e-27	98.28	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
TYJ95836.1	2.6e-27	98.28	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
XP_008463092.1	2.2e-26	96.55	PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis mel...	[more]

BLAST of MELO3C032988 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNG5	2.5e-12	56.36	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana...	[more]

BLAST of MELO3C032988 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UKC7	1.3e-27	98.28	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7VIP6	1.3e-27	98.28	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5D3BAB0	1.3e-27	98.28	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7T598	1.3e-27	98.28	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7SUU1	1.1e-26	96.55	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]

BLAST of MELO3C032988 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48120.1	1.8e-13	56.36	hydrolases;protein serine/threonine phosphatases	[more]
AT2G25010.1	1.9e-04	34.43	Aminotransferase-like, plant mobile domain family protein	[more]
AT1G17930.1	3.3e-04	33.33	Aminotransferase-like, plant mobile domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019557	Aminotransferase-like, plant mobile domain	PFAM	PF10536	PMD	coord: 3..56 e-value: 2.1E-11 score: 43.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032988.1	MELO3C032988.1	mRNA