MELO3C032984 (gene) Melon (DHL92) v4

Overview


Name	MELO3C032984
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein NRT1/ PTR FAMILY 5.2-like
Location	chr10: 12019634 .. 12019790 (+)
RNA-Seq Expression	MELO3C032984
Synteny	MELO3C032984

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACAAGTGGAGAAGAAAGGCTCGGAAAATGGAAGAGATGATTATACGGAAGATGGAACTGTGAGTCTCAAAGGTTTACCTGTCTTAAGATCAAAGACTAGGAGATGGAGAGTCTGTTCCTTCATTGTTGGTAGTTATAATCTTCAACGAACTT

mRNA sequence

ATGGCACAAGTGGAGAAGAAAGGCTCGGAAAATGGAAGAGATGATTATACGGAAGATGGAACTGTGAGTCTCAAAGGTTTACCTGTCTTAAGATCAAAGACTAGGAGATGGAGAGTCTGTTCCTTCATTGTTGGTAGTTATAATCTTCAACGAACTT

Coding sequence (CDS)

ATGGCACAAGTGGAGAAGAAAGGCTCGGAAAATGGAAGAGATGATTATACGGAAGATGGAACTGTGAGTCTCAAAGGTTTACCTGTCTTAAGATCAAAGACTAGGAGATGGAGAGTCTGTTCCTTCATTGTTGGTAGTTATAATCTTCAACGAACT

Protein sequence

MAQVEKKGSENGRDDYTEDGTVSLKGLPVLRSKTRRWRVCSFIVGSYNLQRT

Homology

[Close]

BLAST of MELO3C032984 vs. NCBI nr
Match: KAA0043221.1 (protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo var. makuwa] >TYK21343.1 protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 3.0e-14
Identity = 40/50 (80.00%), Postives = 43/50 (86.00%), Query Frame = 0


Query: 1  MAQVEKKGSENGRDDYTEDGTVSLKGLPVLRSKTRRWRVCSFIVGSYNLQ 51
          MAQVE+KGS+NGRDDYTED TVS KGLPVLRSKT RWR CSFIVG Y  +
Sbjct: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVGDYKFR 50

[Close]

BLAST of MELO3C032984 vs. NCBI nr
Match: KAA0037975.1 (protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo var. makuwa])

HSP 1 Score: 84.3 bits (207), Expect = 3.3e-13
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 1  MAQVEKKGSENGRDDYTEDGTVSLKGLPVLRSKTRRWRVCSFIV 45
          MAQVE+KGSENGRDDYTEDGTVSLKGLPVLRSKT  WR CSFIV
Sbjct: 1  MAQVEEKGSENGRDDYTEDGTVSLKGLPVLRSKTGGWRACSFIV 44

[Close]

BLAST of MELO3C032984 vs. NCBI nr
Match: XP_008447390.2 (PREDICTED: LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo])

HSP 1 Score: 84.3 bits (207), Expect = 3.3e-13
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 1  MAQVEKKGSENGRDDYTEDGTVSLKGLPVLRSKTRRWRVCSFIV 45
          MAQVE+KGSENGRDDYTEDGTVSLKGLPVLRSKT  WR CSFIV
Sbjct: 1  MAQVEEKGSENGRDDYTEDGTVSLKGLPVLRSKTGGWRACSFIV 44

[Close]

BLAST of MELO3C032984 vs. NCBI nr
Match: XP_004152059.1 (protein NRT1/ PTR FAMILY 5.2 [Cucumis sativus] >KGN58287.1 hypothetical protein Csa_017448 [Cucumis sativus])

HSP 1 Score: 84.3 bits (207), Expect = 3.3e-13
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 1  MAQVEKKGSENGRDDYTEDGTVSLKGLPVLRSKTRRWRVCSFIV 45
          MAQV +KGSENGRDDYTEDGTVSLKGLPVLRSKT RWR CSFIV
Sbjct: 1  MAQVGEKGSENGRDDYTEDGTVSLKGLPVLRSKTGRWRACSFIV 44

[Close]

BLAST of MELO3C032984 vs. NCBI nr
Match: XP_038887496.1 (protein NRT1/ PTR FAMILY 5.2-like isoform X1 [Benincasa hispida] >XP_038887497.1 protein NRT1/ PTR FAMILY 5.2-like isoform X1 [Benincasa hispida] >XP_038887498.1 protein NRT1/ PTR FAMILY 5.2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 79.0 bits (193), Expect = 1.4e-11
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 1  MAQVEKKGSENGRDDYTEDGTVSLKGLPVLRSKTRRWRVCSFIV 45
          MAQVE+KGS NGRDDYT+DGTV+LKG P+LRSKT RWR CSFIV
Sbjct: 1  MAQVEEKGSANGRDDYTQDGTVNLKGGPILRSKTGRWRACSFIV 44

[Close]

BLAST of MELO3C032984 vs. ExPASy Swiss-Prot
Match: Q8VZR7 (Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana OX=3702 GN=NPF5.1 PE=2 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 2.4e-06
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 0


Query: 16 YTEDGTVSLKGLPVLRSKTRRWRVCSFIVGSYNLQR 52
          YT+DGTV L+G PVL SKT RWR CSF++G    +R
Sbjct: 7  YTQDGTVDLQGRPVLASKTGRWRACSFLLGYEAFER 42

[Close]

BLAST of MELO3C032984 vs. ExPASy Swiss-Prot
Match: Q9FNL8 (Protein NRT1/ PTR FAMILY 5.3 OS=Arabidopsis thaliana OX=3702 GN=NPF5.3 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 2.6e-05
Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = 0


Query: 14 DDYTEDGTVSLKGLPVLRSKTRRWRVCSFIV 45
          DDYT+DGTV L+G  V RS+T RW+ CSF+V
Sbjct: 8  DDYTKDGTVDLRGNRVRRSQTGRWKACSFVV 38

[Close]

BLAST of MELO3C032984 vs. ExPASy Swiss-Prot
Match: Q9FNL7 (Protein NRT1/ PTR FAMILY 5.2 OS=Arabidopsis thaliana OX=3702 GN=NPF5.2 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 4.5e-05
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 14 DDYTEDGTVSLKGLPVLRSKTRRWRVCSFIV 45
          DDYT+DGTV L+G PV RS   RW+ CSF+V
Sbjct: 8  DDYTKDGTVDLQGNPVRRSIRGRWKACSFVV 38

[Close]

BLAST of MELO3C032984 vs. ExPASy TrEMBL
Match: A0A5D3DCP8 (Protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1814G00110 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-14
Identity = 40/50 (80.00%), Postives = 43/50 (86.00%), Query Frame = 0


Query: 1  MAQVEKKGSENGRDDYTEDGTVSLKGLPVLRSKTRRWRVCSFIVGSYNLQ 51
          MAQVE+KGS+NGRDDYTED TVS KGLPVLRSKT RWR CSFIVG Y  +
Sbjct: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVGDYKFR 50

[Close]

BLAST of MELO3C032984 vs. ExPASy TrEMBL
Match: A0A5A7T926 (Protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001600 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.6e-13
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 1  MAQVEKKGSENGRDDYTEDGTVSLKGLPVLRSKTRRWRVCSFIV 45
          MAQVE+KGSENGRDDYTEDGTVSLKGLPVLRSKT  WR CSFIV
Sbjct: 1  MAQVEEKGSENGRDDYTEDGTVSLKGLPVLRSKTGGWRACSFIV 44

[Close]

BLAST of MELO3C032984 vs. ExPASy TrEMBL
Match: A0A0A0LC54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608170 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.6e-13
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 1  MAQVEKKGSENGRDDYTEDGTVSLKGLPVLRSKTRRWRVCSFIV 45
          MAQV +KGSENGRDDYTEDGTVSLKGLPVLRSKT RWR CSFIV
Sbjct: 1  MAQVGEKGSENGRDDYTEDGTVSLKGLPVLRSKTGRWRACSFIV 44

[Close]

BLAST of MELO3C032984 vs. ExPASy TrEMBL
Match: A0A1S3BHC2 (LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo OX=3656 GN=LOC103489849 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.6e-13
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 1  MAQVEKKGSENGRDDYTEDGTVSLKGLPVLRSKTRRWRVCSFIV 45
          MAQVE+KGSENGRDDYTEDGTVSLKGLPVLRSKT  WR CSFIV
Sbjct: 1  MAQVEEKGSENGRDDYTEDGTVSLKGLPVLRSKTGGWRACSFIV 44

[Close]

BLAST of MELO3C032984 vs. ExPASy TrEMBL
Match: A0A6J1K4P2 (protein NRT1/ PTR FAMILY 5.2-like OS=Cucurbita maxima OX=3661 GN=LOC111491650 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.1e-11
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 1  MAQVEKKGSENGRDDYTEDGTVSLKGLPVLRSKTRRWRVCSFIV 45
          MAQVE+KGS +GRDDYT+DGTVSLKG P+LRSKT RWR CSFIV
Sbjct: 19 MAQVEEKGSADGRDDYTQDGTVSLKGDPILRSKTGRWRACSFIV 62

[Close]

BLAST of MELO3C032984 vs. TAIR 10
Match: AT2G40460.1 (Major facilitator superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 1.7e-07
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 0


Query: 16 YTEDGTVSLKGLPVLRSKTRRWRVCSFIVGSYNLQR 52
          YT+DGTV L+G PVL SKT RWR CSF++G    +R
Sbjct: 7  YTQDGTVDLQGRPVLASKTGRWRACSFLLGYEAFER 42

[Close]

BLAST of MELO3C032984 vs. TAIR 10
Match: AT5G46040.1 (Major facilitator superfamily protein )

HSP 1 Score: 48.5 bits (114), Expect = 1.9e-06
Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = 0


Query: 14 DDYTEDGTVSLKGLPVLRSKTRRWRVCSFIV 45
          DDYT+DGTV L+G  V RS+T RW+ CSF+V
Sbjct: 8  DDYTKDGTVDLRGNRVRRSQTGRWKACSFVV 38

[Close]

BLAST of MELO3C032984 vs. TAIR 10
Match: AT5G46050.1 (peptide transporter 3 )

HSP 1 Score: 47.8 bits (112), Expect = 3.2e-06
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 14 DDYTEDGTVSLKGLPVLRSKTRRWRVCSFIV 45
          DDYT+DGTV L+G PV RS   RW+ CSF+V
Sbjct: 8  DDYTKDGTVDLQGNPVRRSIRGRWKACSFVV 38

The following BLAST results are available for this feature:

BLAST of MELO3C032984 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043221.1	3.0e-14	80.00	protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo var. makuwa] >TYK21343.1 protein...	[more]
KAA0037975.1	3.3e-13	90.91	protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo var. makuwa]	[more]
XP_008447390.2	3.3e-13	90.91	PREDICTED: LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo]	[more]
XP_004152059.1	3.3e-13	90.91	protein NRT1/ PTR FAMILY 5.2 [Cucumis sativus] >KGN58287.1 hypothetical protein ...	[more]
XP_038887496.1	1.4e-11	81.82	protein NRT1/ PTR FAMILY 5.2-like isoform X1 [Benincasa hispida] >XP_038887497.1...	[more]

BLAST of MELO3C032984 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZR7	2.4e-06	61.11	Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana OX=3702 GN=NPF5.1 PE=2 SV=2	[more]
Q9FNL8	2.6e-05	64.52	Protein NRT1/ PTR FAMILY 5.3 OS=Arabidopsis thaliana OX=3702 GN=NPF5.3 PE=2 SV=1	[more]
Q9FNL7	4.5e-05	64.52	Protein NRT1/ PTR FAMILY 5.2 OS=Arabidopsis thaliana OX=3702 GN=NPF5.2 PE=2 SV=1	[more]

BLAST of MELO3C032984 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DCP8	1.4e-14	80.00	Protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T926	1.6e-13	90.91	Protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A0A0LC54	1.6e-13	90.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608170 PE=3 SV=1	[more]
A0A1S3BHC2	1.6e-13	90.91	LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo OX=3656 G...	[more]
A0A6J1K4P2	1.1e-11	81.82	protein NRT1/ PTR FAMILY 5.2-like OS=Cucurbita maxima OX=3661 GN=LOC111491650 PE...	[more]

BLAST of MELO3C032984 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40460.1	1.7e-07	61.11	Major facilitator superfamily protein	[more]
AT5G46040.1	1.9e-06	64.52	Major facilitator superfamily protein	[more]
AT5G46050.1	3.2e-06	64.52	peptide transporter 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032984.1	MELO3C032984.1	mRNA