MELO3C032980.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C032980.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionRhodanese-like domain-containing protein 19
Locationchr08: 12397910 .. 12398547 (-)
RNA-Seq ExpressionMELO3C032980.jh1
SyntenyMELO3C032980.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCAATCTTACAAGGAAGAGGCAAAGTTGAAACAAAGAATCTCTTTGCTATTTCAAAAGATGGAGAGGTTAATATTATCAACCATGTTACCATTTCCTTAACTCATAGGATGTAACCTCACATTTACTAGGCAAAAAAGAGTTTGAAATTAACTCATTTATTCATTCCCAATGTGCAGGATGGTTGATGTTCGAGTTGCCAAAGATCTCTTAGAAAAGGGTTACCTCTATTTGGATGTCAGGTCGGTTTATATATAAATATATATAATCAAAGGTAAAGAAGCTAAATAATTGAAGAGATGGTTTTGGTCTAAGCATTGATCTAGATGCATTTTCTTAGCTAAACTCTTGTAGGTTTGATCCTATAGAATTTGACAGTTCGCTAATGAACAGGTCGAGTAAAGAATCCCGACTTTCTAGCACAAGTTACATCCATGTTAAAGAAGGAAGATCATATAGTAGTGGTAAGAAGAAAAAGAAAAACTATTCCTCGGTGTCGCCACTTTTATATTCCAATGCAGATCCAATAGTAAAATTGAAACAAATTGCAAATTATTTACCTATTTGTGCAGGCTTGCAATAGTGGTGGTAGAGGCCTTCGCGCTTGCGTTGATCTTCTTAACGCGGTATTTTA

mRNA sequence

ATGGATCCAATCTTACAAGGAAGAGGCAAAGTTGAAACAAAGAATCTCTTTGCTATTTCAAAAGATGGAGAGGTTAATATTATCAACCATGTTACCATTTCCTTAACTCATAGGATGATGGTTGATGTTCGAGTTGCCAAAGATCTCTTAGAAAAGGGTTACCTCTATTTGGATGTCAGGTTTGATCCTATAGAATTTGACAGTTCGCTAATGAACAGGTCGAGTAAAGAATCCCGACTTTCTAGCACAAGTTACATCCATGTTAAAGAAGGAAGATCATATAGTAGTGGTAAGAAGAAAAAGAAAAACTATTCCTCGGTGTCGCCACTTTTATATTCCAATGCAGATCCAATAGCTTGCAATAGTGGTGGTAGAGGCCTTCGCGCTTGCGTTGATCTTCTTAACGCGGTATTTTA

Coding sequence (CDS)

ATGGATCCAATCTTACAAGGAAGAGGCAAAGTTGAAACAAAGAATCTCTTTGCTATTTCAAAAGATGGAGAGGTTAATATTATCAACCATGTTACCATTTCCTTAACTCATAGGATGATGGTTGATGTTCGAGTTGCCAAAGATCTCTTAGAAAAGGGTTACCTCTATTTGGATGTCAGGTTTGATCCTATAGAATTTGACAGTTCGCTAATGAACAGGTCGAGTAAAGAATCCCGACTTTCTAGCACAAGTTACATCCATGTTAAAGAAGGAAGATCATATAGTAGTGGTAAGAAGAAAAAGAAAAACTATTCCTCGGTGTCGCCACTTTTATATTCCAATGCAGATCCAATAGCTTGCAATAGTGGTGGTAGAGGCCTTCGCGCTTGCGTTGATCTTCTTAACGCGGTATTT

Protein sequence

MDPILQGRGKVETKNLFAISKDGEVNIINHVTISLTHRMMVDVRVAKDLLEKGYLYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKKKKNYSSVSPLLYSNADPIACNSGGRGLRACVDLLNAVF
Homology
[Close]
BLAST of MELO3C032980.jh1 vs. NCBI nr
Match: KAA0025853.1 (rhodanese-like domain-containing protein 19 [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (474), Expect = 1.10e-58
Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 0 

Query: 41  VDVRVAKDLLEKGYLYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK 100
           VDVRV KDLLEKG+LYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK
Sbjct: 5   VDVRVVKDLLEKGHLYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK 64

Query: 101 KKNYSSVSPLLYSNADPIACNSGGRGLRACVDLLNAVF 138
           KKNYSSVSPLLYSNA PIACNSGGRGLRACVDLLNA+F
Sbjct: 65  KKNYSSVSPLLYSNAYPIACNSGGRGLRACVDLLNAIF 102

[Close]
BLAST of MELO3C032980.jh1 vs. NCBI nr
Match: XP_016903690.1 (PREDICTED: rhodanese-like domain-containing protein 19, mitochondrial, partial [Cucumis melo])

HSP 1 Score: 184 bits (466), Expect = 1.65e-57
Identity = 93/98 (94.90%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 41  VDVRVAKDLLEKGYLYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK 100
           VDVRVAKDLLEKG+LYLDVRFDPIE DSSLMN+SSKESRLSSTSYIHVKEGRSYSSGKKK
Sbjct: 2   VDVRVAKDLLEKGHLYLDVRFDPIESDSSLMNKSSKESRLSSTSYIHVKEGRSYSSGKKK 61

Query: 101 KKNYSSVSPLLYSNADPIACNSGGRGLRACVDLLNAVF 138
           KKNYSSVSPLLY NADPIACNSGGR LRACVDLLNAVF
Sbjct: 62  KKNYSSVSPLLYPNADPIACNSGGRSLRACVDLLNAVF 99

[Close]
BLAST of MELO3C032980.jh1 vs. NCBI nr
Match: KAA0055594.1 (rhodanese-like domain-containing protein 19 [Cucumis melo var. makuwa])

HSP 1 Score: 184 bits (466), Expect = 1.81e-57
Identity = 93/98 (94.90%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 41  VDVRVAKDLLEKGYLYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK 100
           VDVRVAKDLLEKG+LYLDVRFDPIE DSSLMN+SSKESRLSSTSYIHVKEGRSYSSGKKK
Sbjct: 5   VDVRVAKDLLEKGHLYLDVRFDPIESDSSLMNKSSKESRLSSTSYIHVKEGRSYSSGKKK 64

Query: 101 KKNYSSVSPLLYSNADPIACNSGGRGLRACVDLLNAVF 138
           KKNYSSVSPLLY NADPIACNSGGR LRACVDLLNAVF
Sbjct: 65  KKNYSSVSPLLYPNADPIACNSGGRSLRACVDLLNAVF 102

[Close]
BLAST of MELO3C032980.jh1 vs. NCBI nr
Match: TYJ99859.1 (rhodanese-like domain-containing protein 19 [Cucumis melo var. makuwa] >TYK22611.1 rhodanese-like domain-containing protein 19 [Cucumis melo var. makuwa])

HSP 1 Score: 157 bits (397), Expect = 4.08e-47
Identity = 83/98 (84.69%), Postives = 85/98 (86.73%), Query Frame = 0 

Query: 41  VDVRVAKDLLEKGYLYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK 100
           VDVRV KDLLEKG+LYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK
Sbjct: 5   VDVRVVKDLLEKGHLYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK 64

Query: 101 KKNYSSVSPLLYSNADPIACNSGGRGLRACVDLLNAVF 138
           KKNYSS            ACNSGGRGLRACVDLLNA+F
Sbjct: 65  KKNYSS------------ACNSGGRGLRACVDLLNAIF 90

[Close]
BLAST of MELO3C032980.jh1 vs. NCBI nr
Match: TYK01331.1 (rhodanese-like domain-containing protein 19 [Cucumis melo var. makuwa])

HSP 1 Score: 154 bits (388), Expect = 9.58e-46
Identity = 83/98 (84.69%), Postives = 84/98 (85.71%), Query Frame = 0 

Query: 41  VDVRVAKDLLEKGYLYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK 100
           VDVRVAKDLLEKG+LYLDVRFDPIE DSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK
Sbjct: 5   VDVRVAKDLLEKGHLYLDVRFDPIESDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK 64

Query: 101 KKNYSSVSPLLYSNADPIACNSGGRGLRACVDLLNAVF 138
           KKNYSS            ACNSGGR LRACVDLLNAVF
Sbjct: 65  KKNYSS------------ACNSGGRSLRACVDLLNAVF 90

[Close]
BLAST of MELO3C032980.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SME8 (Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001270 PE=4 SV=1)

HSP 1 Score: 187 bits (474), Expect = 5.30e-59
Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 0 

Query: 41  VDVRVAKDLLEKGYLYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK 100
           VDVRV KDLLEKG+LYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK
Sbjct: 5   VDVRVVKDLLEKGHLYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK 64

Query: 101 KKNYSSVSPLLYSNADPIACNSGGRGLRACVDLLNAVF 138
           KKNYSSVSPLLYSNA PIACNSGGRGLRACVDLLNA+F
Sbjct: 65  KKNYSSVSPLLYSNAYPIACNSGGRGLRACVDLLNAIF 102

[Close]
BLAST of MELO3C032980.jh1 vs. ExPASy TrEMBL
Match: A0A1S4E6R4 (rhodanese-like domain-containing protein 19, mitochondrial OS=Cucumis melo OX=3656 GN=LOC107992360 PE=4 SV=1)

HSP 1 Score: 184 bits (466), Expect = 8.00e-58
Identity = 93/98 (94.90%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 41  VDVRVAKDLLEKGYLYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK 100
           VDVRVAKDLLEKG+LYLDVRFDPIE DSSLMN+SSKESRLSSTSYIHVKEGRSYSSGKKK
Sbjct: 2   VDVRVAKDLLEKGHLYLDVRFDPIESDSSLMNKSSKESRLSSTSYIHVKEGRSYSSGKKK 61

Query: 101 KKNYSSVSPLLYSNADPIACNSGGRGLRACVDLLNAVF 138
           KKNYSSVSPLLY NADPIACNSGGR LRACVDLLNAVF
Sbjct: 62  KKNYSSVSPLLYPNADPIACNSGGRSLRACVDLLNAVF 99

[Close]
BLAST of MELO3C032980.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UKA5 (Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00760 PE=4 SV=1)

HSP 1 Score: 184 bits (466), Expect = 8.78e-58
Identity = 93/98 (94.90%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 41  VDVRVAKDLLEKGYLYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK 100
           VDVRVAKDLLEKG+LYLDVRFDPIE DSSLMN+SSKESRLSSTSYIHVKEGRSYSSGKKK
Sbjct: 5   VDVRVAKDLLEKGHLYLDVRFDPIESDSSLMNKSSKESRLSSTSYIHVKEGRSYSSGKKK 64

Query: 101 KKNYSSVSPLLYSNADPIACNSGGRGLRACVDLLNAVF 138
           KKNYSSVSPLLY NADPIACNSGGR LRACVDLLNAVF
Sbjct: 65  KKNYSSVSPLLYPNADPIACNSGGRSLRACVDLLNAVF 102

[Close]
BLAST of MELO3C032980.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BLK3 (Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13469G00010 PE=4 SV=1)

HSP 1 Score: 157 bits (397), Expect = 1.97e-47
Identity = 83/98 (84.69%), Postives = 85/98 (86.73%), Query Frame = 0 

Query: 41  VDVRVAKDLLEKGYLYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK 100
           VDVRV KDLLEKG+LYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK
Sbjct: 5   VDVRVVKDLLEKGHLYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK 64

Query: 101 KKNYSSVSPLLYSNADPIACNSGGRGLRACVDLLNAVF 138
           KKNYSS            ACNSGGRGLRACVDLLNA+F
Sbjct: 65  KKNYSS------------ACNSGGRGLRACVDLLNAIF 90

[Close]
BLAST of MELO3C032980.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BNE9 (Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00100 PE=4 SV=1)

HSP 1 Score: 154 bits (388), Expect = 4.64e-46
Identity = 83/98 (84.69%), Postives = 84/98 (85.71%), Query Frame = 0 

Query: 41  VDVRVAKDLLEKGYLYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK 100
           VDVRVAKDLLEKG+LYLDVRFDPIE DSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK
Sbjct: 5   VDVRVAKDLLEKGHLYLDVRFDPIESDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK 64

Query: 101 KKNYSSVSPLLYSNADPIACNSGGRGLRACVDLLNAVF 138
           KKNYSS            ACNSGGR LRACVDLLNAVF
Sbjct: 65  KKNYSS------------ACNSGGRSLRACVDLLNAVF 90

[Close]
BLAST of MELO3C032980.jh1 vs. TAIR 10
Match: AT2G21045.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.2e-04
Identity = 38/96 (39.58%), Postives = 47/96 (48.96%), Query Frame = 0 

Query: 41  VDVRVAKDLLEKGYLYLDVRFDPIEFDSSLMNRSSKESRLSSTSYIHVKEGRSYSSGKKK 100
           VDV  AK  L  G+ YLDVR +  EF      +S  E  L+        EGR  +     
Sbjct: 44  VDVYTAKGFLSTGHRYLDVRTNE-EF-----AKSHVEEALNIPYMFKTDEGRVIN----- 103

Query: 101 KKNYSSVSPLLYSNADPI-ACNSGGRGLRACVDLLN 136
               S V+ +   +   I ACN+GGRG RACVDLLN
Sbjct: 104 PDFLSQVASVCKKDEHLIVACNAGGRGSRACVDLLN 128

The following BLAST results are available for this feature:
BLAST of MELO3C032980.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0025853.11.10e-5895.92rhodanese-like domain-containing protein 19 [Cucumis melo var. makuwa][more]
XP_016903690.11.65e-5794.90PREDICTED: rhodanese-like domain-containing protein 19, mitochondrial, partial [... [more]
KAA0055594.11.81e-5794.90rhodanese-like domain-containing protein 19 [Cucumis melo var. makuwa][more]
TYJ99859.14.08e-4784.69rhodanese-like domain-containing protein 19 [Cucumis melo var. makuwa] >TYK22611... [more]
TYK01331.19.58e-4684.69rhodanese-like domain-containing protein 19 [Cucumis melo var. makuwa][more]
BLAST of MELO3C032980.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C032980.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SME85.30e-5995.92Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S4E6R48.00e-5894.90rhodanese-like domain-containing protein 19, mitochondrial OS=Cucumis melo OX=36... [more]
A0A5A7UKA58.78e-5894.90Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5D3BLK31.97e-4784.69Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5D3BNE94.64e-4684.69Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=11946... [more]
BLAST of MELO3C032980.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G21045.11.2e-0439.58Rhodanese/Cell cycle control phosphatase superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032980.jh1.t1MELO3C032980.jh1.t1mRNA