MELO3C032976.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C032976.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 12093697 .. 12098731 (-)
RNA-Seq ExpressionMELO3C032976.jh1
SyntenyMELO3C032976.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGAAATCTGATTTGTAGGGTGAATTGGGGAGTTGGAGTTTCAAGAGCAAAACCTATGACACTTTCTATGAAGGATACATGTTTCCTCTACTTGTCAAGGAGCAGCTGGAGTTTCGGCCCGAAAAGAATTTTTGACGAGTTTGGGTATTCATCATCTTCCTTGTTAAAAAGTCATTAATTCTTGCAGCCCTTTCCATAATCTAAAACTTATCGGTTTTCAATTCGTTTACTTAATAGATGAGTGCCCCACAAAAAGAAATCAAATCCCTCAAATTTCAATGCCATGAAGGCAATCTCAGAAACTCAAAGGTATTCTTTCTTTTTTCTCTTCTTCATTCCATTTTCTATCTTCTTTTTCTTTGAACCCAAAACCCATTTCAAATTTTGCTTCCATTTTATGTTTCTTCAACTCTTTTGTTCAGATTTAGTATTGGGTTTTTATTTCTTTGATTTTCTGCTTTTTTTTTTTTCATATACCCCTTTACTTAGAAATCAAAACCCATTTGATATTTTGCTTCCATTTTATGGTTTCTTCAAAACCCGTTAAATAATTTTCTACTTCTTGTTGCAGTTTTTTAGGGTTTTTTTTTTTTGTTTGGTATTTCTCAGGTCTTCAGTGAATCAAGAATTGTGGAATACGATTTCAAAGAAAGACTTATTTCCCCTAAAAAACACGAGGTGCATGACCAAGCACAGTCACTATTATTGTTTTCTTTCTAGTTTCTATTATCAATTTATTAATGTTTACAGTTGATGAGAGTTTCAATTTTGAACACAAATTATTGTCAATAAGAAGCAACACTAAAGTTTTTGGGAAGAAACATAGATTTGGAATCCATGATCGTCAAGTTGTATGTTGTTGAAGGAAAAATAGTTCATCATGAGGACTGGTACGTTAGCCAACATTTTTCACCTTTACATTTCTTTGAATAGACTTGTTGCCTTCATCCGCCTCTTAATCATTCTCTTGCTTGCAACGAGTAAGGTTATCTAGTGTATAGGGTTTAGAAGAGTTAGAATTGAATGGGGATCCTAACTCTCCAGACTGGGGTTGTTTGGCAGGCAATTGAGAAATTAATAAAAGAGTTGGCAATCAATATAGAGAGGAAGAGCTTGAGTATTAATAATGTCTAATAAAATGCGTGTTTTTTCAGCTGTATTGATTTTCAAGCACAAGGTTGGGTTGTCATTTGTAAATGTAAATGTTTTGTGGAAGTGTTTTAGATGAAAGCATTTTTAGTCCATTGCATAAGTAATGTACTCTAGATAAATATACATATATTATGTCTGAAGTATTAGGCTATAAGCCAGATATTACAAAGATGGAGTCTAGACAAAAACAATTTGAGAATGGATATTTTCTGCTATCCAATGCTATGGAAAAAAATTCATATCTTTTTCTTTCTTATTCATGTTCCAGCTGACTTGTTTTATTAATTTTTTTATGCACTTGGTTGTTCATACTTGTTTTATTATTTTTATTTGTTATATTCCTTGATGTATTCGTTATATTCCTTCCTCTAATGATTGACGGTATTTCTTCTATATAAGAAGATTGTGAAGAAGCACGCTCACCATTTGTGTAGAAGTACAAGACTGTCATACACCCTGGTGAGGTATATGTCTTTCAATTTCTCAAACAATGAAGTATAAAACATATGAAAACATTAGATATAGTGAAGCTCATCTTCATATAAGAAATCTATTCCTGTCAACATTATGCAATTTCTCAAGCTTTTTAATATATTTAGTTGTTGATTCTTGATATTAATAGGATTCTTAATATTAATACAACTTTGCTGATTTTCTTAAGTTATTAGCTTACTGGTTTTTTCAAATTTGTAGCTTAGTTTTAGCTTGAATTAGGCTTCACATTTATGAAAAGATATGATCACTTGTTTGAAGATAATTTCTTTTGCTTTGAGTATTTTTGTATTTTGGTGCAACACAATCATCCTAAATTCTTTTGTAATTATATAATCATCATATGCTTATTTACACAGTTGAAAGACTTTCATATAACTGTTTTGGTGGGGAGGGGTAACCTCTACCCTTGCCCTTTGGGTCGTTCTTCTTTCTCTCATTTTTTCTCTTAGTCAAATTATAAGAATGACTAAAAGAGTTAAGGTTACTAGTTCATTTGTAAGCCTAGGCACACCGCTACCAACACAGCTTCCACATATAGCTCAACAAAGTACAACTTGGAAACATGGTCCAGTTTGAAACAATATTACCTTTATTCATGTGTATCAAGAATCATATTGACTTTTCTGTAGAGTTTTATGTTAAAATATGCTATGGTGCATATTCATTCCATAATTCAAATCCGATAATAAGAAGGAAGCATAGAAGGGAAGCATGGAAGATATATTTTGTTTTTGATCCAATGGAAATTAATGTAGAATGGCTTGATAAAAAAATTTGGGGCACGAAAATGTTGACATTTTGTAGGATTTTGTTAAATTGAATGTTGATTTTGCATATTGGGTTAGTAAAATATTATTCTCAATGGTGTTAATCCTTTTGGATTTTGGAGGTTAGTATCCTCCCGTGCATTTGGATTTACTATTTTTAGTCCATGGTGCTAATGTAATAACCTTACTTGTAGGTTTAGTATCCTTTTTCTGAAAGATTTTGCACGATCGAACTAGCTTTACTATAAGTTTATGATACATTTCAAAATTTTGATTGTTTCTATGTTATTATGGTCTGTTTGTTTTTATCTTTTCTTACCAATTTTGTTATTTGTTTGGGCTAAAATTTTGATATAGATTTCCTCCCTAAGAGTCCATAATTGGTGCTTGGTTTCTTCACGTTATTGGTTCATTTGATTTTTAGGACAAAAAACTTGAAACGGAAGACCCTGAGAAGAAGAAGAATGAAGAAAAGGTTTCTTTCTCCCATTTCTTATTTATTTTTTATCGTATTGCTACGCATTTTTTTGGCAGTTTGGTATAGTGTTGTTGCTATTATTTTGTTTTATTTCAATTGAAGCTTAATTGGACTGGCTCGGGGCCTGGTTCGGCCTCGGATGATTCGGTTGAGTTGGCTGATATGGATTCTTCTGTGTTGGATGAGCTTTTGGTGATGCTGAAGAAGTGAGTTTTTTGTTAATTCCTCTACTTAAACTGTTCTTTCTTGTTTTTGTTAAAACTGTTTGTTTGATTCTTTTTCGTGAAGTAATGAAATTTTGTTGAGTTTGGTGGTTTGATTGGGTTTAGATAAGTTGAATGATACCCTTTTAGAAATGCTGAACTATGATAGAATTTCAAAGTTTCTGGTCTAGTTCGAGTGATCCTGTTACATTCAAATTTCTTAGGCAATGATCGTTAACCTTCATGCTAGATATCCTTTAAGTTGAAGAATTTGTAGTTAGATGCATTGGTTCTCTAGTAGTTTCTTAGGTTGAAAATGATTTGTTTGAGAATTCAAATCACACACGTTAGGTCGGGTATTGACTTTTCAAATAGATTTAGCTCGAACACACCACCGATGAGTTATCTGTAAACGTGTAGTTCCTTTGAAGTTTCTAAATGACAGAGGCGAAGGTAACTAATCTAGTTACTCATTGTAATTGGTTCAAGCCTAGCTTTAAAGTTCACTGTCACAACCTTGTCTTAAACATTAAGTAACCACCTGATTCTCTTTCAGATGTAGAGCAGAAAGTATTGGCTGGATCGGAAGTGATCAATAAGGAGTGGTGTTATTCTTGCAATAAGTGATCAATTAGATATAGTGTTAACTTTTTAACTTTAAGATGGTCATAATAATTCTTGCAATAATGAGTGATGTTAAATAAAATATGAGTTGCTATATTTCAACACCTATTACATTAGTTCTTAATATGGATAAGACCTTATTTTCTTATGGGGTGGATTGTTGAGATTTATATATATGTTTATGTATTTTAGGTCAGGCTCGGTTCGTTAGGATACTATGAACTAAACATGGAGTCCTATCTTTGGTAGGAAACTTCTTTGTGGAATTATATATAATATTATATAGTGATAATTTGGTTTATTTTTAGTGGATTTATAATAAAGAAATTGTGATTAAGGAATTTTGATCTAATTTGGGTATTTCTCATTGCAGAAACCTTGTAAATGTTTTTGGAGAGTTTCTTCCAAAAGTTAGTGCTTGTAAATTATAGCGAGTAATTCTTCCTCATACTTTATTATATGTATCAAGGTGTGTTGGGCATAAAACTTTTTAGTGCACATCAATGAGCTTTTAAATCCTTTGCAAATGTACGTACCTCTCACTATGTTATAGTTTTATTGTCTCATAATGTAGTTTAGTTTTATTGTCTCATAATGTAAAGATTGTTGTGAAAGAAGACTTTGAAGAAGCTATAAAATTTAAACTATTTGTGTTATAGTTTCATCTTGAAGTGGCTAGCAAGGAATGAACGACACTTTTGTTTTGACTTTTTAAATTTATTGCTATTCTTAGTTTATTTTTAGGTTTACTCATGATGATTAGAAAATCCGAGTCTCTATTCATAATACTTTTGTGAAAAATATGGTGTGGCACTCAAATTTTCATCTCTACCGGCTATACATGCTCGTAATTATGCAAAGCCCATTTTTAGCTTTGAGTTTTGTTATTTGTTGTTTGTTTTGGACTTGTGTGAAGTTTTGTAATTAATTTAGCTGAGTTTGTGGGCTGAATTTGGTATTTGTGATTTTGTTTTTCTTCTTTTTCATATGGATGAATTTGTAGATTTCATTTTTAGTGATGAAATTGTGCATTGTGTACTTAAACAATAGCATAATTTTGTGACCCGTATATGTAAGACTTTCCATTTGAATACCCTCTACATTTACAATACCAAGCTTAGAAGTTATAGAAAAGAATAACTTACTGCCAAGCTTGGAAGTTACCATTGTTGAAGTGTGTATGTGCTTGTGTTGTTGAAGTGAATGTGTATTGTGTTGTTGAAGTGAATCTGCTGTATTGTTGAATCAATTTTGTTTTCTTTTATTTTCTTACTAGGTTTTGCTAGAATCCATTGGAGCAGCGAAGCCATATTTGT

mRNA sequence

TTGAAATCTGATTTGTAGGGTGAATTGGGGAGTTGGAGTTTCAAGAGCAAAACCTATGACACTTTCTATGAAGGATACATGTTTCCTCTACTTGTCAAGGAGCAGCTGGAGTTTCGGCCCGAAAAGAATTTTTGACGAGTTTGGATGAGTGCCCCACAAAAAGAAATCAAATCCCTCAAATTTCAATGCCATGAAGGCAATCTCAGAAACTCAAAGGTCTTCAGTGAATCAAGAATTGTGGAATACGATTTCAAAGAAAGACTTATTTCCCCTAAAAAACACGAGATTGTGAAGAAGCACGCTCACCATTTGTGTAGAAGTACAAGACTGTCATACACCCTGGTGAGGACAAAAAACTTGAAACGGAAGACCCTGAGAAGAAGAAGAATGAAGAAAAGCTTAATTGGACTGGCTCGGGGCCTGGTTCGGCCTCGGATGATTCGGTTGAGTTGGCTGATATGGATTCTTCTGTGTTGGATGAGCTTTTGGTGATGCTGAAGAAGTTTTGCTAGAATCCATTGGAGCAGCGAAGCCATATTTGT

Coding sequence (CDS)

ATGAGTGCCCCACAAAAAGAAATCAAATCCCTCAAATTTCAATGCCATGAAGGCAATCTCAGAAACTCAAAGGTCTTCAGTGAATCAAGAATTGTGGAATACGATTTCAAAGAAAGACTTATTTCCCCTAAAAAACACGAGATTGTGAAGAAGCACGCTCACCATTTGTGTAGAAGTACAAGACTGTCATACACCCTGGTGAGGACAAAAAACTTGAAACGGAAGACCCTGAGAAGAAGAAGAATGAAGAAAAGCTTAATTGGACTGGCTCGGGGCCTGGTTCGGCCTCGGATGATTCGGTTGAGTTGGCTGATATGGATTCTTCTGTGTTGGATGAGCTTTTGGTGA

Protein sequence

MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIVKKHAHHLCRSTRLSYTLVRTKNLKRKTLRRRRMKKSLIGLARGLVRPRMIRLSWLIWILLCWMSFW
Homology
[Close]
BLAST of MELO3C032976.jh1 vs. NCBI nr
Match: XP_008455732.1 (PREDICTED: uncharacterized protein LOC103495835 [Cucumis melo])

HSP 1 Score: 223 bits (567), Expect = 4.31e-73
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIVKKHAHHLCRST 60
           MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIVKKHAHHLCRST
Sbjct: 1   MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIVKKHAHHLCRST 60

Query: 61  RLSYTLVRTKNLKRKTLRRRRMKKSLIGLARGLVRPRMIRLSWLIWILLCWMSFW 115
           RLSYTLVRTKNLKRKTLRRRRMKKSLIGLARGLVRPRMIRLSWLIWILLCWMSFW
Sbjct: 61  RLSYTLVRTKNLKRKTLRRRRMKKSLIGLARGLVRPRMIRLSWLIWILLCWMSFW 115

[Close]
BLAST of MELO3C032976.jh1 vs. NCBI nr
Match: XP_016900106.1 (PREDICTED: uncharacterized protein LOC107990753 isoform X1 [Cucumis melo])

HSP 1 Score: 65.1 bits (157), Expect = 1.11e-10
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 1   MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEY 34
           MSAPQKEIKSLK QCHE NLRNSKVFSESRIVEY
Sbjct: 78  MSAPQKEIKSLKSQCHESNLRNSKVFSESRIVEY 111

[Close]
BLAST of MELO3C032976.jh1 vs. NCBI nr
Match: TYK09197.1 (Nuclear transport factor 2 family protein [Cucumis melo var. makuwa])

HSP 1 Score: 51.6 bits (122), Expect = 4.37e-05
Identity = 30/44 (68.18%), Postives = 32/44 (72.73%), Query Frame = 0 

Query: 6   KEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIV 49
           KEIKS  +         SKVFSESRIVEYDFKERLISP KHEI+
Sbjct: 70  KEIKSAFYSL-------SKVFSESRIVEYDFKERLISPGKHEII 106

[Close]
BLAST of MELO3C032976.jh1 vs. NCBI nr
Match: KAA0034645.1 (Nuclear transport factor 2 family protein [Cucumis melo var. makuwa])

HSP 1 Score: 51.6 bits (122), Expect = 4.79e-05
Identity = 30/44 (68.18%), Postives = 32/44 (72.73%), Query Frame = 0 

Query: 6   KEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIV 49
           KEIKS  +         SKVFSESRIVEYDFKERLISP KHEI+
Sbjct: 78  KEIKSAFYSL-------SKVFSESRIVEYDFKERLISPGKHEII 114

[Close]
BLAST of MELO3C032976.jh1 vs. NCBI nr
Match: XP_008446746.1 (PREDICTED: uncharacterized protein LOC103489375 isoform X2 [Cucumis melo])

HSP 1 Score: 51.6 bits (122), Expect = 6.85e-05
Identity = 30/44 (68.18%), Postives = 32/44 (72.73%), Query Frame = 0 

Query: 6   KEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIV 49
           KEIKS  +         SKVFSESRIVEYDFKERLISP KHEI+
Sbjct: 120 KEIKSAFYSL-------SKVFSESRIVEYDFKERLISPGKHEII 156

[Close]
BLAST of MELO3C032976.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C297 (uncharacterized protein LOC103495835 OS=Cucumis melo OX=3656 GN=LOC103495835 PE=4 SV=1)

HSP 1 Score: 223 bits (567), Expect = 2.09e-73
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIVKKHAHHLCRST 60
           MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIVKKHAHHLCRST
Sbjct: 1   MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIVKKHAHHLCRST 60

Query: 61  RLSYTLVRTKNLKRKTLRRRRMKKSLIGLARGLVRPRMIRLSWLIWILLCWMSFW 115
           RLSYTLVRTKNLKRKTLRRRRMKKSLIGLARGLVRPRMIRLSWLIWILLCWMSFW
Sbjct: 61  RLSYTLVRTKNLKRKTLRRRRMKKSLIGLARGLVRPRMIRLSWLIWILLCWMSFW 115

[Close]
BLAST of MELO3C032976.jh1 vs. ExPASy TrEMBL
Match: A0A1S4DVU2 (uncharacterized protein LOC107990753 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990753 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.36e-11
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 1   MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEY 34
           MSAPQKEIKSLK QCHE NLRNSKVFSESRIVEY
Sbjct: 78  MSAPQKEIKSLKSQCHESNLRNSKVFSESRIVEY 111

[Close]
BLAST of MELO3C032976.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CB20 (Nuclear transport factor 2 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001900 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.12e-05
Identity = 30/44 (68.18%), Postives = 32/44 (72.73%), Query Frame = 0 

Query: 6   KEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIV 49
           KEIKS  +         SKVFSESRIVEYDFKERLISP KHEI+
Sbjct: 70  KEIKSAFYSL-------SKVFSESRIVEYDFKERLISPGKHEII 106

[Close]
BLAST of MELO3C032976.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SZL6 (Nuclear transport factor 2 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G006640 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.32e-05
Identity = 30/44 (68.18%), Postives = 32/44 (72.73%), Query Frame = 0 

Query: 6   KEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIV 49
           KEIKS  +         SKVFSESRIVEYDFKERLISP KHEI+
Sbjct: 78  KEIKSAFYSL-------SKVFSESRIVEYDFKERLISPGKHEII 114

[Close]
BLAST of MELO3C032976.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BFU1 (uncharacterized protein LOC103489375 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489375 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 3.32e-05
Identity = 30/44 (68.18%), Postives = 32/44 (72.73%), Query Frame = 0 

Query: 6   KEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIV 49
           KEIKS  +         SKVFSESRIVEYDFKERLISP KHEI+
Sbjct: 120 KEIKSAFYSL-------SKVFSESRIVEYDFKERLISPGKHEII 156

The following BLAST results are available for this feature:
BLAST of MELO3C032976.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455732.14.31e-73100.00PREDICTED: uncharacterized protein LOC103495835 [Cucumis melo][more]
XP_016900106.11.11e-1094.12PREDICTED: uncharacterized protein LOC107990753 isoform X1 [Cucumis melo][more]
TYK09197.14.37e-0568.18Nuclear transport factor 2 family protein [Cucumis melo var. makuwa][more]
KAA0034645.14.79e-0568.18Nuclear transport factor 2 family protein [Cucumis melo var. makuwa][more]
XP_008446746.16.85e-0568.18PREDICTED: uncharacterized protein LOC103489375 isoform X2 [Cucumis melo][more]
BLAST of MELO3C032976.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C032976.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C2972.09e-73100.00uncharacterized protein LOC103495835 OS=Cucumis melo OX=3656 GN=LOC103495835 PE=... [more]
A0A1S4DVU25.36e-1194.12uncharacterized protein LOC107990753 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5D3CB202.12e-0568.18Nuclear transport factor 2 family protein OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A5A7SZL62.32e-0568.18Nuclear transport factor 2 family protein OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A1S3BFU13.32e-0568.18uncharacterized protein LOC103489375 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of MELO3C032976.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032976.jh1.t1MELO3C032976.jh1.t1mRNA