
MELO3C032939 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTATACTTAATCATTGCTATCTATTATAATTACAAAAAAAAAAAAAAAAAAGTAGCCAAGCTTAAGGCCCACGAGCGGATTTGAGCCGTCGGATAGCATCGATGATACAATCCATACATCGCCAGACCCACCACTTGTAAGACGAGAGCTCATTCATTGGTTTTTAAACAACTCATAGGTTTTCTTTCAAATAAAATTCAAACAAACAGAACGTAACCCAAAAGTTTCCATTTTACTAATTTATGGACATGACATGGTGAATAGTATCCTTCAAACGTCGTCGAATCACACAATAGCATCTGAACAGACACTTCCATTTCTTCTTCACTCTCTGCAGCATCGTCATAGCTCCATCTTCACCTCTGGCCTTTCTCCAAAAATTCAAAACATACACACACAAACACACACTATGTCTTCTTCTCCAAAGTTCTTCAGAATGGTATTGCAGAGAAATCTCGACGACCCAAAACTGGTGAAAATACATCCTCCCTTCATTGTCAAATTTTTTTAACCTTTTCAAGAAGATGAATGTACCCATCTTTTAAAGTTTTGATTTTTATCACTTTTTCCTCCCTCCCATAAACATGGGAAACAAAAAGGTGCATACTTTTCAAGTTCTAAAGAAACATTTTCTTTTGGGGTTTGTTTTTTCAGATGATTCCGAAGAAGTTTGTGGAAGATTATGGTAAGGTTTTGTCAAATTCAGTTAATTTAAAGCTTTCAGATGGAAGGGAATGGAAGGTGGGTTTAAGAACGGCTACGAACGGCGCTGTTTGGCTAGAAAAGGGTTGGGATAAATTTTCAGAACATTACTGTTTAGAGTTTGGGTCTTTGCTGATCTTTACATTATTAGATGGAAGGAGGAGTTCGGATTTTGGAGTAACTATATTTGACCCAACCGGAGTGGAAACCAAATACTTTTCTTCTTCACCACAATTTAATGAGGATTCTTATTCTCATTCCGACTCCGACTCCGACTCCGACTCCGATGGCAATACCAATACCAATTCCGACATCAATACTGATTCCGATTCTGATGAAAGTTCAGAGAGTTTTCGTGGACATTCGAAGAAGAGGAAGAATGTTTCAGTTCCATGTAGTCAATCTCGTAGGAAAATGAGAAAGGACGATTCGTTTACAATCAAAACAGAACCTGCAGAAGCAGAAGCAGAAGCAGAAGCAGGTATGCTATTTCTTTCCCCGTATATTGTTTTAGAGTAAATGGTTTGTTTATATGCATTTATGAAACAAGTAACTTTTTACTAGAGATTCAACGTTTAATAATCTATTTTTTTGGAAGAGTATTTGGGAGTTAGCATTGTTTTTAAAAGTAGTGTGGTTTGA GTATACTTAATCATTGCTATCTATTATAATTACAAAAAAAAAAAAAAAAAAGTAGCCAAGCTTAAGGCCCACGAGCGGATTTGAGCCGTCGGATAGCATCGATGATACAATCCATACATCGCCAGACCCACCACTTGTAAGACGAGAGCTCATTCATTGGTTTTTAAACAACTCATAGGTTTTCTTTCAAATAAAATTCAAACAAACAGAACGTAACCCAAAAGTTTCCATTTTACTAATTTATGGACATGACATGGTGAATAGTATCCTTCAAACGTCGTCGAATCACACAATAGCATCTGAACAGACACTTCCATTTCTTCTTCACTCTCTGCAGCATCGTCATAGCTCCATCTTCACCTCTGGCCTTTCTCCAAAAATTCAAAACATACACACACAAACACACACTATGTCTTCTTCTCCAAAGTTCTTCAGAATGGTATTGCAGAGAAATCTCGACGACCCAAAACTGATGATTCCGAAGAAGTTTGTGGAAGATTATGATGGAAGGAGGAGTTCGGATTTTGGAGTAACTATATTTGACCCAACCGGAGTGGAAACCAAATACTTTTCTTCTTCACCACAATTTAATGAGGATTCTTATTCTCATTCCGACTCCGACTCCGACTCCGACTCCGATGGCAATACCAATACCAATTCCGACATCAATACTGATTCCGATTCTGATGAAAGTTCAGAGAGTTTTCGTGGACATTCGAAGAAGAGGAAGAATGTTTCAGTTCCATGTAGTCAATCTCGTAGGAAAATGAGAAAGGACGATTCGTTTACAATCAAAACAGAACCTGCAGAAGCAGAAGCAGAAGCAGAAGCAGAGTATTTGGGAGTTAGCATTGTTTTTAAAAGTAGTGTGGTTTGA ATGGTGAATAGTATCCTTCAAACGTCGTCGAATCACACAATAGCATCTGAACAGACACTTCCATTTCTTCTTCACTCTCTGCAGCATCGTCATAGCTCCATCTTCACCTCTGGCCTTTCTCCAAAAATTCAAAACATACACACACAAACACACACTATGTCTTCTTCTCCAAAGTTCTTCAGAATGGTATTGCAGAGAAATCTCGACGACCCAAAACTGATGATTCCGAAGAAGTTTGTGGAAGATTATGATGGAAGGAGGAGTTCGGATTTTGGAGTAACTATATTTGACCCAACCGGAGTGGAAACCAAATACTTTTCTTCTTCACCACAATTTAATGAGGATTCTTATTCTCATTCCGACTCCGACTCCGACTCCGACTCCGATGGCAATACCAATACCAATTCCGACATCAATACTGATTCCGATTCTGATGAAAGTTCAGAGAGTTTTCGTGGACATTCGAAGAAGAGGAAGAATGTTTCAGTTCCATGTAGTCAATCTCGTAGGAAAATGAGAAAGGACGATTCGTTTACAATCAAAACAGAACCTGCAGAAGCAGAAGCAGAAGCAGAAGCAGAGTATTTGGGAGTTAGCATTGTTTTTAAAAGTAGTGTGGTTTGA MVNSILQTSSNHTIASEQTLPFLLHSLQHRHSSIFTSGLSPKIQNIHTQTHTMSSSPKFFRMVLQRNLDDPKLMIPKKFVEDYDGRRSSDFGVTIFDPTGVETKYFSSSPQFNEDSYSHSDSDSDSDSDGNTNTNSDINTDSDSDESSESFRGHSKKRKNVSVPCSQSRRKMRKDDSFTIKTEPAEAEAEAEAEYLGVSIVFKSSVV Homology
BLAST of MELO3C032939 vs. NCBI nr
Match: XP_008440222.1 (PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo]) HSP 1 Score: 337.4 bits (864), Expect = 8.6e-89 Identity = 194/250 (77.60%), Postives = 194/250 (77.60%), Query Frame = 0
BLAST of MELO3C032939 vs. NCBI nr
Match: XP_004142020.2 (B3 domain-containing transcription factor VRN1 isoform X1 [Cucumis sativus] >KGN48482.1 hypothetical protein Csa_004020 [Cucumis sativus]) HSP 1 Score: 139.0 bits (349), Expect = 4.5e-29 Identity = 97/196 (49.49%), Postives = 106/196 (54.08%), Query Frame = 0
BLAST of MELO3C032939 vs. NCBI nr
Match: XP_011657839.1 (B3 domain-containing transcription factor VRN1 isoform X2 [Cucumis sativus]) HSP 1 Score: 137.9 bits (346), Expect = 1.0e-28 Identity = 96/194 (49.48%), Postives = 105/194 (54.12%), Query Frame = 0
BLAST of MELO3C032939 vs. NCBI nr
Match: XP_004142019.2 (B3 domain-containing transcription factor VRN1 [Cucumis sativus] >KGN48483.1 hypothetical protein Csa_003505 [Cucumis sativus]) HSP 1 Score: 128.3 bits (321), Expect = 7.9e-26 Identity = 91/202 (45.05%), Postives = 100/202 (49.50%), Query Frame = 0
BLAST of MELO3C032939 vs. NCBI nr
Match: TYK12921.1 (B3 domain-containing transcription factor VRN1-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 69.7 bits (169), Expect = 3.3e-08 Identity = 60/190 (31.58%), Postives = 80/190 (42.11%), Query Frame = 0
BLAST of MELO3C032939 vs. ExPASy TrEMBL
Match: A0A1S3B0K5 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=LOC103484740 PE=4 SV=1) HSP 1 Score: 337.4 bits (864), Expect = 4.2e-89 Identity = 194/250 (77.60%), Postives = 194/250 (77.60%), Query Frame = 0
BLAST of MELO3C032939 vs. ExPASy TrEMBL
Match: A0A0A0KJE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G489980 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 2.2e-29 Identity = 97/196 (49.49%), Postives = 106/196 (54.08%), Query Frame = 0
BLAST of MELO3C032939 vs. ExPASy TrEMBL
Match: A0A0A0KG44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G489990 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 3.8e-26 Identity = 91/202 (45.05%), Postives = 100/202 (49.50%), Query Frame = 0
BLAST of MELO3C032939 vs. ExPASy TrEMBL
Match: A0A5D3CM75 (B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005160 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.6e-08 Identity = 60/190 (31.58%), Postives = 80/190 (42.11%), Query Frame = 0
BLAST of MELO3C032939 vs. ExPASy TrEMBL
Match: A0A6J1BTG9 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005417 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 8.0e-08 Identity = 61/186 (32.80%), Postives = 82/186 (44.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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