MELO3C032931 (gene) Melon (DHL92) v4

Overview


Name	MELO3C032931
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Glial fibrillary acidic protein-like
Location	chr02: 19303204 .. 19303621 (-)
RNA-Seq Expression	MELO3C032931
Synteny	MELO3C032931

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCGCTATGGGAATTGAAGTTCTACAACATTCGATTGAAGAATACAAATCCCAACTTATAGAAGCGGAAAGCAAAAACAATTTTTTGCAAAAGGCCGTTAACAGTTCTGAAAGCCAGTTGCTGATATGTCGCAAAGCAAGGAAAGTCATAACAGATGACTATGCTCAATTAATAGAAAAATATCAAGAAATGTCGATAGATTTCATGATGTGGAAGGACGAGTACGAGACATTGAGACGAAAGTATGATGATGCTATAGGTCGGATGGAACGAGGGGCTGAAAAATTAAGACAAATGGCGAGGGTGGCAGATCAATTCTCAGTGCAAGCTAGGACTCTCCGACAAGGTGTTATACCTACCCGCGACACCGATAAAGAATTGTCTCATTTTCTAGGAATCATAGGGCAGTGCCTCGGAC

mRNA sequence

ACCGCTATGGGAATTGAAGTTCTACAACATTCGATTGAAGAATACAAATCCCAACTTATAGAAGCGGAAAGCAAAAACAATTTTTTGCAAAAGGCCGTTAACAGTTCTGAAAGCCAGTTGCTGATATGTCGCAAAGCAAGGAAAGTCATAACAGATGACTATGCTCAATTAATAGAAAAATATCAAGAAATGTCGATAGATTTCATGATGTGGAAGGACGAGTACGAGACATTGAGACGAAAGTATGATGATGCTATAGGTCGGATGGAACGAGGGGCTGAAAAATTAAGACAAATGGCGAGGGTGGCAGATCAATTCTCAGTGCAAGCTAGGACTCTCCGACAAGGTGTTATACCTACCCGCGACACCGATAAAGAATTGTCTCATTTTCTAGGAATCATAGGGCAGTGCCTCGGAC

Coding sequence (CDS)

ATGGGAATTGAAGTTCTACAACATTCGATTGAAGAATACAAATCCCAACTTATAGAAGCGGAAAGCAAAAACAATTTTTTGCAAAAGGCCGTTAACAGTTCTGAAAGCCAGTTGCTGATATGTCGCAAAGCAAGGAAAGTCATAACAGATGACTATGCTCAATTAATAGAAAAATATCAAGAAATGTCGATAGATTTCATGATGTGGAAGGACGAGTACGAGACATTGAGACGAAAGTATGATGATGCTATAGGTCGGATGGAACGAGGGGCTGAAAAATTAAGACAAATGGCGAGGGTGGCAGATCAATTCTCAGTGCAAGCTAGGACTCTCCGACAAGGTGTTATACCTACCCGCGACACCGATAAAGAATTGTCTCATTTTCTAGGAATCATAGGGCAGTGCCTCGGA

Protein sequence

MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKARKVITDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLG

Homology

[Close]

BLAST of MELO3C032931 vs. NCBI nr
Match: KAA0046606.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 268.1 bits (684), Expect = 4.2e-68
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKARKVITDDYAQLIEKYQ 60
           MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKARKVITDDYAQLIEKYQ
Sbjct: 323 MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKARKVITDDYAQLIEKYQ 382

Query: 61  EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD 120
           EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD
Sbjct: 383 EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD 442

Query: 121 TDKELSHFLGIIGQCLG 138
           TDKELSHFLGIIGQCLG
Sbjct: 443 TDKELSHFLGIIGQCLG 459

[Close]

BLAST of MELO3C032931 vs. NCBI nr
Match: KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKARKVITDDYAQLIEKYQ 60
           MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKAR+VITDDYAQLIEKYQ
Sbjct: 464 MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKAREVITDDYAQLIEKYQ 523

Query: 61  EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD 120
           EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD
Sbjct: 524 EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD 583

Query: 121 TDKELSHFLGIIGQCLG 138
           TDKELSHFLGIIGQCLG
Sbjct: 584 TDKELSHFLGIIGQCLG 600

[Close]

BLAST of MELO3C032931 vs. NCBI nr
Match: KAA0065294.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 1   MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKARKVITDDYAQLIEKYQ 60
           MGIEVLQH IEEYKSQLIEA+SKNNFLQKAVNSSESQLLICRKAR+VI DDYAQL+EKYQ
Sbjct: 112 MGIEVLQHLIEEYKSQLIEADSKNNFLQKAVNSSESQLLICRKAREVIIDDYAQLMEKYQ 171

Query: 61  EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD 120
           EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD
Sbjct: 172 EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD 231

Query: 121 TDKELSHFLGIIGQCLG 138
           TDKELSHFLGIIGQCLG
Sbjct: 232 TDKELSHFLGIIGQCLG 248

[Close]

BLAST of MELO3C032931 vs. NCBI nr
Match: TYK27025.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 258.1 bits (658), Expect = 4.4e-65
Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKARKVITDDYAQLIEKYQ 60
           MGIEVLQHSI+EYKSQL+E ESKN FLQKAVNSSESQLLICRKAR+VITDDYAQLIEKYQ
Sbjct: 1   MGIEVLQHSIKEYKSQLLEVESKNKFLQKAVNSSESQLLICRKAREVITDDYAQLIEKYQ 60

Query: 61  EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD 120
           EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQF VQARTLRQGVIPTRD
Sbjct: 61  EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFLVQARTLRQGVIPTRD 120

Query: 121 TDKELSHFLGIIGQCLG 138
           TDKELSHFLGIIGQCLG
Sbjct: 121 TDKELSHFLGIIGQCLG 137

[Close]

BLAST of MELO3C032931 vs. NCBI nr
Match: KAA0025321.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 256.1 bits (653), Expect = 1.7e-64
Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKARKVITDDYAQLIEKYQ 60
           MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKAR+VITDDYAQL+EKYQ
Sbjct: 112 MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKAREVITDDYAQLMEKYQ 171

Query: 61  EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD 120
           EMSIDFMMWKDEYETLRRKYDDAI RMERGAEKLRQMA VADQFSVQARTLRQGVIPTRD
Sbjct: 172 EMSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRD 231

Query: 121 TDKELSHFLGIIGQCLG 138
            D+ELSHFLGIIGQCLG
Sbjct: 232 IDEELSHFLGIIGQCLG 248

[Close]

BLAST of MELO3C032931 vs. ExPASy TrEMBL
Match: A0A5A7TXA1 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001520 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.1e-68
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKARKVITDDYAQLIEKYQ 60
           MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKARKVITDDYAQLIEKYQ
Sbjct: 323 MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKARKVITDDYAQLIEKYQ 382

Query: 61  EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD 120
           EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD
Sbjct: 383 EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD 442

Query: 121 TDKELSHFLGIIGQCLG 138
           TDKELSHFLGIIGQCLG
Sbjct: 443 TDKELSHFLGIIGQCLG 459

[Close]

BLAST of MELO3C032931 vs. ExPASy TrEMBL
Match: A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.0e-68
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKARKVITDDYAQLIEKYQ 60
           MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKAR+VITDDYAQLIEKYQ
Sbjct: 464 MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKAREVITDDYAQLIEKYQ 523

Query: 61  EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD 120
           EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD
Sbjct: 524 EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD 583

Query: 121 TDKELSHFLGIIGQCLG 138
           TDKELSHFLGIIGQCLG
Sbjct: 584 TDKELSHFLGIIGQCLG 600

[Close]

BLAST of MELO3C032931 vs. ExPASy TrEMBL
Match: A0A5A7VDD9 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00070 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.3e-66
Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 1   MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKARKVITDDYAQLIEKYQ 60
           MGIEVLQH IEEYKSQLIEA+SKNNFLQKAVNSSESQLLICRKAR+VI DDYAQL+EKYQ
Sbjct: 112 MGIEVLQHLIEEYKSQLIEADSKNNFLQKAVNSSESQLLICRKAREVIIDDYAQLMEKYQ 171

Query: 61  EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD 120
           EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD
Sbjct: 172 EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD 231

Query: 121 TDKELSHFLGIIGQCLG 138
           TDKELSHFLGIIGQCLG
Sbjct: 232 TDKELSHFLGIIGQCLG 248

[Close]

BLAST of MELO3C032931 vs. ExPASy TrEMBL
Match: A0A5D3DUN1 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold17837G00010 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.1e-65
Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKARKVITDDYAQLIEKYQ 60
           MGIEVLQHSI+EYKSQL+E ESKN FLQKAVNSSESQLLICRKAR+VITDDYAQLIEKYQ
Sbjct: 1   MGIEVLQHSIKEYKSQLLEVESKNKFLQKAVNSSESQLLICRKAREVITDDYAQLIEKYQ 60

Query: 61  EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD 120
           EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQF VQARTLRQGVIPTRD
Sbjct: 61  EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFLVQARTLRQGVIPTRD 120

Query: 121 TDKELSHFLGIIGQCLG 138
           TDKELSHFLGIIGQCLG
Sbjct: 121 TDKELSHFLGIIGQCLG 137

[Close]

BLAST of MELO3C032931 vs. ExPASy TrEMBL
Match: A0A5A7SM49 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold23528G00010 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 8.1e-65
Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKARKVITDDYAQLIEKYQ 60
           MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKAR+VITDDYAQL+EKYQ
Sbjct: 112 MGIEVLQHSIEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKAREVITDDYAQLMEKYQ 171

Query: 61  EMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRD 120
           EMSIDFMMWKDEYETLRRKYDDAI RMERGAEKLRQMA VADQFSVQARTLRQGVIPTRD
Sbjct: 172 EMSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRD 231

Query: 121 TDKELSHFLGIIGQCLG 138
            D+ELSHFLGIIGQCLG
Sbjct: 232 IDEELSHFLGIIGQCLG 248

The following BLAST results are available for this feature:

BLAST of MELO3C032931 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046606.1	4.2e-68	100.00	glial fibrillary acidic protein-like [Cucumis melo var. makuwa]	[more]
KAA0033221.1	1.2e-67	99.27	uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]	[more]
KAA0065294.1	1.5e-65	96.35	glial fibrillary acidic protein-like [Cucumis melo var. makuwa]	[more]
TYK27025.1	4.4e-65	95.62	glial fibrillary acidic protein-like [Cucumis melo var. makuwa]	[more]
KAA0025321.1	1.7e-64	95.62	glial fibrillary acidic protein-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C032931 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TXA1	2.1e-68	100.00	Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7SUT0	6.0e-68	99.27	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84...	[more]
A0A5A7VDD9	7.3e-66	96.35	Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3DUN1	2.1e-65	95.62	Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7SM49	8.1e-65	95.62	Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of MELO3C032931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 3..37

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032931.1	MELO3C032931.1	mRNA