MELO3C032926 (gene) Melon (DHL92) v4

Overview
NameMELO3C032926
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr01: 3831295 .. 3831487 (-)
RNA-Seq ExpressionMELO3C032926
SyntenyMELO3C032926
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTGAAAGAGATCAAATCAGTGCGGGAACGTACGTGGTGGAGCGAAGTTGGGGCGGCCGTTCGTGGGGGATCTACTGCGTGAAAGTCTGTTATGGACGTCAGGGGAGGGAACGTCGTCTATGGTGGCGCCGACAAGTCGATTGATATCCCTGTAGTGGCGCGGCCAAAGCTTGTACGTGAACGTCGTCTGTGA

mRNA sequence

TGTGAAAGAGATCAAATCAGTGCGGGAACGTACGTGGTGGAGCGAAGTTGGGGCGGCCGTTCGTGGGGGATCTACTGCGTGAAAGTCTGTTATGGACGTCAGGGGAGGGAACGTCGTCTATGGTGGCGCCGACAAGTCGATTGATATCCCTGTAGTGGCGCGGCCAAAGCTTGTACGTGAACGTCGTCTGTGA

Coding sequence (CDS)

ATGGACGTCAGGGGAGGGAACGTCGTCTATGGTGGCGCCGACAAGTCGATTGATATCCCTGTAGTGGCGCGGCCAAAGCTTGTACGTGAACGTCGTCTGTGA

Protein sequence

MDVRGGNVVYGGADKSIDIPVVARPKLVRERRL
Homology
[Close]
BLAST of MELO3C032926 vs. NCBI nr
Match: KAA0062347.1 (hypothetical protein E6C27_scaffold154G001090 [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-07
Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 0 

Query: 1   MDVRGGNVVYGGADKSIDIPVVARPKLVRERRL 34
           MD+RGGNVVYGGADKSIDIPVVARPKLVRER L
Sbjct: 82  MDIRGGNVVYGGADKSIDIPVVARPKLVRERCL 114

[Close]
BLAST of MELO3C032926 vs. ExPASy TrEMBL
Match: A0A5A7V5X7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G001090 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.3e-08
Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 0 

Query: 1   MDVRGGNVVYGGADKSIDIPVVARPKLVRERRL 34
           MD+RGGNVVYGGADKSIDIPVVARPKLVRER L
Sbjct: 82  MDIRGGNVVYGGADKSIDIPVVARPKLVRERCL 114

[Close]
BLAST of MELO3C032926 vs. ExPASy TrEMBL
Match: A0A5A7U2Z3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00860 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.3e-04
Identity = 25/33 (75.76%), Postives = 27/33 (81.82%), Query Frame = 0 

Query: 1  MDVRGGNVVYGGADKSIDIPVVARPKLVRERRL 34
          MDVRGGN + GG DKSIDIP+VA  KLV ERRL
Sbjct: 1  MDVRGGNAICGGVDKSIDIPMVAPLKLVSERRL 33

The following BLAST results are available for this feature:
BLAST of MELO3C032926 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0062347.11.3e-0793.94hypothetical protein E6C27_scaffold154G001090 [Cucumis melo var. makuwa][more]
BLAST of MELO3C032926 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C032926 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V5X76.3e-0893.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U2Z37.3e-0475.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C032926 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032926.1MELO3C032926.1mRNA