MELO3C032902 (gene) Melon (DHL92) v4

Overview
NameMELO3C032902
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X5
Locationchr08: 1788309 .. 1791834 (+)
RNA-Seq ExpressionMELO3C032902
SyntenyMELO3C032902
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTGTTTGTAGGGTGCACGCGCATACACAGGATTAGCTAATGCTAAAAGGAAAGGGCTAAACCCTTGAGAAAACCCAAAGAAGGAGATTTCCGAATTCCTTTGCCAAATACTTGAAACCATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCTTCAGATCAACCATAGCCCGAGCACCTATCTCCGCCAGGCTTTCCAACGGTGCTAAAATGAAACCGGCTCCATCTCCGTTTGCCATCCCTAAGCAGAACCCACTCTCCCAATCCCTTCGCATTTTGAGGTAATACTTCGACCAAACTTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATAATGTTATGCGTCTGATGATTTTTTTTTTTTTTTGAAGGTCACCTGTTGAATTGAGTTGCTGTGTGGAATCTTTGCTTCCTTACCACTCTGCTACTGCCTCTGCATTGCTTACTTCTATGCTTTCCGTCTCTCGTCGAAGCTACGGTTGGACTCCTGAAGGTATTTTCCTCCTCTTATTACCGAATTTCTCTACGAATTGAATTGATTTTTTTTTTTTAATTTCTTTGAATTGAGTTTCCCATCTCGTCCTGTATGGCTTTAGCTATGGGTGTTGGTGATTTATCTTCCTTTAGTGGCTAATAAGTTGGTTGGTTCTTGTGGTTCTCCAATTCCCTAATACAAGGTCGGGGGTTTATATTTTAGGTGCGTTTAAAATGTGGTTGAGTGAACTGTTCTTTGAGAATTTGAAAGAACAAATTTGTTCGTCTGGCTGGATAATTTTAATTTGCATTTACGTCAACCCATCTTTTACTCTCTTGCGCGATGAAAGAGTGCACATTGCTTTTCCTTTTGTAGGGCAAGACGATACTATTTGAGGTCTAAGCATCAACGATGGTATGACTGGATTTATTTTTGTCGTCGACGTTTTGGAAATTGTGGTAAAATATTACTCGAGTAGATTATGTTTTTTTTAAAAAAATCATTCTTTTTTGTGATGAATTTGAGCTGAGAGATTCAGTCCTTTTGTTCCCATGACTTTAAGGAGTTGTTGATCATTCATAGCTGATGAAATTCCAAACTAAGTATGAAGTTCAGATGTTGTTATTTCACACCTTTATGTGGAAAATTTTATGTGTGTTCTATTTATCAATTGAATCATTGGGGCTTAGACCAATATGATATTCCAGTTTCATGTTTTGTGGTCAAAGAATTTGAATTTACTTGTGATGTTTTGAAATCTTTATCCTCTCAATGCTCTATGGTATTACTGTCTAGTCATTGTCTGAACTGAATTTTCAATAATTAGACTGTAAAGAGCTCAATCTTGATTATTTTATTGGGGATGTTGAATTAATAATAGACCATAAGAACGAGTCGGCTGTGTGAAAAAGGTCAGGTTACTTGTGAATTTTCATTTTATTTTGTTCATTGATGGCCTTAATTTTAGTAATACGGCAAGTATGATATTTGATTTCTTCTACCACTCAGATTGCAATGATGATGTATGATGAATATCGGATGGTTCGAGCACTTGCCCTCAAAAGACAAGATACTGAAATAAAGTCATGTGTTGCTTGTTTTTCGTGTGCAAGTAGTTCAGTGACATTGGGTTTTTTATAGCAGTAGGAAGAAACAAACTCATAACTGAGTTTGCGTAGATTTATATGAGTTGGCGAGGCATGATTTTGTTGTATTCACCATTCTTGATGACAGTTCAAATCCTTGAGTTATCCCTACTGTATAAATGTTCTTTGTCTTTAAACTTTGGGGACTTTAATTGAGTTCGTATCCTTTCAATGTTACTTTCTATAAAATGGTGTTATTACATCAATTGTCACCCTGAAACGTGAAACTTCTACGTTTATGTTGTAGATTCTTGATTGATGAATGCATACTACTCAGCAGGACTTACCTAAGGTAATCAATTCTAGGTTAGCATCCAAGCCTTCCTCCTGCAACTAAAAGATTATTATGAAGTATCATACAAACATTAACAAGATCAGAATTTTAGTGTGGTGCACTAAATGGACCCAATAAATTACAATGTAGTTGAAATGAGTCGTAGTTCTAAGAGAAAGCAAAGGGAAGTAGTTTCTGGGTTTATAGAACATATAGAAGGTCCTGTGCCGGTACTTCTCGAAACAGGTGTTATTTAACTGGTTTACACACCTTCAATTATATCGAAGAATCAGCCTTTGAAAGAATTTAGTTCTCCTATAGCTGTTCCAATGACTGATTCCTCATAGCCATCACCTTTCGTGGTGGCTTTCCTCCTCCAAATTTGCTATCAGCCTCTCTTCAAGTCTGTCCCCATCTTCAAACTCATTGTGTAAAATAGGTTTCAAATGTATAATTTCATGAATGTAACCTTGCATCCATCAACACCGATCTATATATCTAACTCCACATGTTTCTTTCTCTAGGATCGTGAGAGATTGCGTATTGCTGAACTTGGCTAAGCGACTTGCTGTGTGATTCTTTACCGCTTACATGCTTTTAGAAGCCCTAGGGGTGGACACCTTTACAATTTTCATGTTGGAGGATAACAATTTACATGATTGTTAATCATGATGTTTTAGGCATAAAAATTGAACTTTAGATGAGTTGGTTATGCAGTTTTTAGACAATGTTTATAATCTATCTACATTTTCTCCTTTTTGTTGTATTGTAGATGGATGATTACTGTCTGTTGAGATGCGGTCCATTGATCATAGTTTCGAGAATTTGATTGGAGAGACTGTAAGAATTTTTTTTTTTTTTTTTTTAATAATTAAAGATCATAGATGTCTTGGTTGATTATTTTAGATTTCCAATTGTAGAATAATGTTTTATGATTCCATGCAACGGGTAAGCACTTCATGTTGCCCTTTTTCTTCCTACAAGAGTTAGAACTCTTCTTCTGCAACCTCTCTCCAAGTTCATAGGAAATGCTGTCTACTAAAATTTTGTTGCAGATCTTCATATTTATTTCTTTTTTGAGTATTTAAGACCTAAAAGTAGAAAGTTGTATAACTTGTTAATGATCTCTTGTTTTCATTCAAAAACTGATGTTTGTTGTTCCAACCAAAAAAAATTGTTCATAACTAGACATGCTTTTTTAGATACAGAAATAACAATTAAAAATTTTAAACTAGAAAACTCTTTTGAATGGATTAATTAATGGATTGAAGGTAATAGTAAGCCTAATAATAGAGAAAATTCCAAGTTTGAGAGATCGACTTTTATACACACAAATTTAGCCACTTAGGGTTAATAAAAAGAATCAAAATAGTATATGTGACTAAGAATAAAATTCGTTTTAACGAAATACAATTAATTTTCTTGAGAACTTTTGAAACCATCAATATCTATTCTTTTTTTAACTGGGTTACTTTATTTTACATTGAAAATCCATTCATGAATTTATAGCATGGTGTACGAAGAATTCTACTATAGGTATTGTTAAAGATACTTTTTTTCTATTATTTCATATTTTTGTAGATAGACGTTGCGATATCATGGTCTGTGGACGCCTTTGAGAAATAA

mRNA sequence

GTGTGTTTGTAGGGTGCACGCGCATACACAGGATTAGCTAATGCTAAAAGGAAAGGGCTAAACCCTTGAGAAAACCCAAAGAAGGAGATTTCCGAATTCCTTTGCCAAATACTTGAAACCATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCTTCAGATCAACCATAGCCCGAGCACCTATCTCCGCCAGGCTTTCCAACGGTGCTAAAATGAAACCGGCTCCATCTCCGTTTGCCATCCCTAAGCAGAACCCACTCTCCCAATCCCTTCGCATTTTGAGGTCACCTGTTGAATTGAGTTGCTGTGTGGAATCTTTGCTTCCTTACCACTCTGCTACTGCCTCTGCATTGCTTACTTCTATGCTTTCCGTCTCTCGTCGAAGCTACGGTTGGACTCCTGAAGTACCACTCAGATTGCAATGATGATGTATGATGAATATCGGATGGTTCGAGCACTTGCCCTCAAAAGACAAGATACTGAAATAAAATTCTTGATTGATGAATGCATACTACTCAGCAGGACTTACCTAAGAATAATGTTTTATGATTCCATGCAACGGATAGACGTTGCGATATCATGGTCTGTGGACGCCTTTGAGAAATAA

Coding sequence (CDS)

ATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCTTCAGATCAACCATAGCCCGAGCACCTATCTCCGCCAGGCTTTCCAACGGTGCTAAAATGAAACCGGCTCCATCTCCGTTTGCCATCCCTAAGCAGAACCCACTCTCCCAATCCCTTCGCATTTTGAGGTCACCTGTTGAATTGAGTTGCTGTGTGGAATCTTTGCTTCCTTACCACTCTGCTACTGCCTCTGCATTGCTTACTTCTATGCTTTCCGTCTCTCGTCGAAGCTACGGTTGGACTCCTGAAGTACCACTCAGATTGCAATGA

Protein sequence

MSSAAAMAARSAFRSTIARAPISARLSNGAKMKPAPSPFAIPKQNPLSQSLRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEVPLRLQ
Homology
BLAST of MELO3C032902 vs. NCBI nr
Match: XP_038880789.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 167.2 bits (422), Expect = 7.5e-38
Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 0

Query: 1  MSSAAAMAARSAFRSTIARAPISARLSNGAKMKPAPSPFAIPKQNPLSQSLRILRSPVEL 60
          MSSAAAMAARSAFRST+ARAPISARL+NGAKMK APSPF+IPKQNPLSQS RILRSPVEL
Sbjct: 1  MSSAAAMAARSAFRSTLARAPISARLTNGAKMKSAPSPFSIPKQNPLSQSHRILRSPVEL 60

Query: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE 96
          SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
Sbjct: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE 95

BLAST of MELO3C032902 vs. NCBI nr
Match: XP_038880792.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X4 [Benincasa hispida])

HSP 1 Score: 167.2 bits (422), Expect = 7.5e-38
Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 0

Query: 1  MSSAAAMAARSAFRSTIARAPISARLSNGAKMKPAPSPFAIPKQNPLSQSLRILRSPVEL 60
          MSSAAAMAARSAFRST+ARAPISARL+NGAKMK APSPF+IPKQNPLSQS RILRSPVEL
Sbjct: 1  MSSAAAMAARSAFRSTLARAPISARLTNGAKMKSAPSPFSIPKQNPLSQSHRILRSPVEL 60

Query: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE 96
          SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
Sbjct: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE 95

BLAST of MELO3C032902 vs. NCBI nr
Match: XP_038880793.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X5 [Benincasa hispida])

HSP 1 Score: 167.2 bits (422), Expect = 7.5e-38
Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 0

Query: 1  MSSAAAMAARSAFRSTIARAPISARLSNGAKMKPAPSPFAIPKQNPLSQSLRILRSPVEL 60
          MSSAAAMAARSAFRST+ARAPISARL+NGAKMK APSPF+IPKQNPLSQS RILRSPVEL
Sbjct: 1  MSSAAAMAARSAFRSTLARAPISARLTNGAKMKSAPSPFSIPKQNPLSQSHRILRSPVEL 60

Query: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE 96
          SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
Sbjct: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE 95

BLAST of MELO3C032902 vs. NCBI nr
Match: XP_038880790.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X3 [Benincasa hispida] >XP_038880791.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X3 [Benincasa hispida])

HSP 1 Score: 167.2 bits (422), Expect = 7.5e-38
Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 0

Query: 1  MSSAAAMAARSAFRSTIARAPISARLSNGAKMKPAPSPFAIPKQNPLSQSLRILRSPVEL 60
          MSSAAAMAARSAFRST+ARAPISARL+NGAKMK APSPF+IPKQNPLSQS RILRSPVEL
Sbjct: 1  MSSAAAMAARSAFRSTLARAPISARLTNGAKMKSAPSPFSIPKQNPLSQSHRILRSPVEL 60

Query: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE 96
          SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
Sbjct: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE 95

BLAST of MELO3C032902 vs. NCBI nr
Match: XP_038880785.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X1 [Benincasa hispida] >XP_038880786.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X1 [Benincasa hispida] >XP_038880787.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X1 [Benincasa hispida] >XP_038880788.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 167.2 bits (422), Expect = 7.5e-38
Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 0

Query: 1  MSSAAAMAARSAFRSTIARAPISARLSNGAKMKPAPSPFAIPKQNPLSQSLRILRSPVEL 60
          MSSAAAMAARSAFRST+ARAPISARL+NGAKMK APSPF+IPKQNPLSQS RILRSPVEL
Sbjct: 1  MSSAAAMAARSAFRSTLARAPISARLTNGAKMKSAPSPFSIPKQNPLSQSHRILRSPVEL 60

Query: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE 96
          SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
Sbjct: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE 95

BLAST of MELO3C032902 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.8e-11
Identity = 46/92 (50.00%), Postives = 62/92 (67.39%), Query Frame = 0

Query: 2  SSAAAMAARSAFRSTIARAPISARLSNGAKMKPAPSPF-AIPKQNPLSQSLRILRSPVEL 61
          +SA    ARS  R+  +R+  ++     ++ K AP  F A  +++PL   L  LR+PVEL
Sbjct: 3  TSAVLSGARSMLRAASSRSAAASTGRFASQAKSAPPLFRATARRSPL---LSPLRNPVEL 62

Query: 62 SCCVESLLPYHSATASALLTSMLSVSRRSYGW 93
          S CVESLLPYHSATASAL+TS LS+S ++YGW
Sbjct: 63 SFCVESLLPYHSATASALMTSKLSISGQTYGW 91

BLAST of MELO3C032902 vs. ExPASy TrEMBL
Match: A0A0A0KHP8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518070 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.9e-35
Identity = 85/95 (89.47%), Postives = 89/95 (93.68%), Query Frame = 0

Query: 1  MSSAAAMAARSAFRSTIARAPISARLSNGAKMKPAPSPFAIPKQNPLSQSLRILRSPVEL 60
          MSSAAAMAARSAFRST+ARAPIS R ++ AK K APSPFAIPKQNPLSQS RILRSPVEL
Sbjct: 1  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVEL 60

Query: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE 96
          SCC+ESLLPYHSATASALLTSMLSVSRRSYGWTPE
Sbjct: 61 SCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE 95

BLAST of MELO3C032902 vs. ExPASy TrEMBL
Match: A0A6J1IUA2 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111478642 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.6e-33
Identity = 83/95 (87.37%), Postives = 88/95 (92.63%), Query Frame = 0

Query: 1  MSSAAAMAARSAFRSTIARAPISARLSNGAKMKPAPSPFAIPKQNPLSQSLRILRSPVEL 60
          MSSAAAMAARSAFRST+ARA IS RL+NGAK+K   SPF+IPKQNPLSQS RILRSPVE+
Sbjct: 1  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM 60

Query: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE 96
          SCCVESLLPYHSATASALLTSMLSVSRRSYGWT E
Sbjct: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSE 95

BLAST of MELO3C032902 vs. ExPASy TrEMBL
Match: A0A6J1EE22 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111433337 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.6e-33
Identity = 83/95 (87.37%), Postives = 88/95 (92.63%), Query Frame = 0

Query: 1  MSSAAAMAARSAFRSTIARAPISARLSNGAKMKPAPSPFAIPKQNPLSQSLRILRSPVEL 60
          MSSAAAMAARSAFRST+ARA IS RL+NGAK+K   SPF+IPKQNPLSQS RILRSPVE+
Sbjct: 1  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM 60

Query: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE 96
          SCCVESLLPYHSATASALLTSMLSVSRRSYGWT E
Sbjct: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSE 95

BLAST of MELO3C032902 vs. ExPASy TrEMBL
Match: A0A6J1IR78 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111478642 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.6e-33
Identity = 83/95 (87.37%), Postives = 88/95 (92.63%), Query Frame = 0

Query: 1  MSSAAAMAARSAFRSTIARAPISARLSNGAKMKPAPSPFAIPKQNPLSQSLRILRSPVEL 60
          MSSAAAMAARSAFRST+ARA IS RL+NGAK+K   SPF+IPKQNPLSQS RILRSPVE+
Sbjct: 1  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM 60

Query: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE 96
          SCCVESLLPYHSATASALLTSMLSVSRRSYGWT E
Sbjct: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSE 95

BLAST of MELO3C032902 vs. ExPASy TrEMBL
Match: A0A6J1IM12 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478642 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.6e-33
Identity = 83/95 (87.37%), Postives = 88/95 (92.63%), Query Frame = 0

Query: 1  MSSAAAMAARSAFRSTIARAPISARLSNGAKMKPAPSPFAIPKQNPLSQSLRILRSPVEL 60
          MSSAAAMAARSAFRST+ARA IS RL+NGAK+K   SPF+IPKQNPLSQS RILRSPVE+
Sbjct: 1  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM 60

Query: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE 96
          SCCVESLLPYHSATASALLTSMLSVSRRSYGWT E
Sbjct: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSE 95

BLAST of MELO3C032902 vs. TAIR 10
Match: AT2G33847.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28395.4); Has 74 Blast hits to 74 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 88.2 bits (217), Expect = 4.1e-18
Identity = 54/86 (62.79%), Postives = 62/86 (72.09%), Query Frame = 0

Query: 8  AARSAFRSTIARAPISARLSNGAKMKPAPSPFAIPKQNPLSQSLRILRSPVELSCCVESL 67
          AARS FRS + RA ++A  S       A S F +PKQ+PLS   RI RSPVELSCCVE++
Sbjct: 3  AARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSH--RIFRSPVELSCCVETM 62

Query: 68 LPYHSATASALLTSMLSVSRRSYGWT 94
          LPYH+ATASALL SMLSVS RS  WT
Sbjct: 63 LPYHTATASALLNSMLSVSGRSI-WT 85

BLAST of MELO3C032902 vs. TAIR 10
Match: AT2G33847.2 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28395.3); Has 71 Blast hits to 71 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 88.2 bits (217), Expect = 4.1e-18
Identity = 54/86 (62.79%), Postives = 62/86 (72.09%), Query Frame = 0

Query: 8  AARSAFRSTIARAPISARLSNGAKMKPAPSPFAIPKQNPLSQSLRILRSPVELSCCVESL 67
          AARS FRS + RA ++A  S       A S F +PKQ+PLS   RI RSPVELSCCVE++
Sbjct: 3  AARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSH--RIFRSPVELSCCVETM 62

Query: 68 LPYHSATASALLTSMLSVSRRSYGWT 94
          LPYH+ATASALL SMLSVS RS  WT
Sbjct: 63 LPYHTATASALLNSMLSVSGRSI-WT 85

BLAST of MELO3C032902 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 1.6e-17
Identity = 56/88 (63.64%), Postives = 65/88 (73.86%), Query Frame = 0

Query: 8  AARSAFRSTIARAPISA-RLSNGAKMKP--APSPFAIPKQNPLSQSLRILRSPVELSCCV 67
          AARS FRS  +RA  +A R S G K  P  A + F +PKQ+PL+   RI RSPVELSCCV
Sbjct: 3  AARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTN--RIFRSPVELSCCV 62

Query: 68 ESLLPYHSATASALLTSMLSVSRRSYGW 93
          E++LPYH+ATASALL SMLSVSRR  GW
Sbjct: 63 ETMLPYHTATASALLNSMLSVSRR--GW 86

BLAST of MELO3C032902 vs. TAIR 10
Match: AT1G28395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 1.6e-17
Identity = 56/88 (63.64%), Postives = 65/88 (73.86%), Query Frame = 0

Query: 8  AARSAFRSTIARAPISA-RLSNGAKMKP--APSPFAIPKQNPLSQSLRILRSPVELSCCV 67
          AARS FRS  +RA  +A R S G K  P  A + F +PKQ+PL+   RI RSPVELSCCV
Sbjct: 3  AARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTN--RIFRSPVELSCCV 62

Query: 68 ESLLPYHSATASALLTSMLSVSRRSYGW 93
          E++LPYH+ATASALL SMLSVSRR  GW
Sbjct: 63 ETMLPYHTATASALLNSMLSVSRR--GW 86

BLAST of MELO3C032902 vs. TAIR 10
Match: AT1G28395.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 1.6e-17
Identity = 56/88 (63.64%), Postives = 65/88 (73.86%), Query Frame = 0

Query: 8  AARSAFRSTIARAPISA-RLSNGAKMKP--APSPFAIPKQNPLSQSLRILRSPVELSCCV 67
          AARS FRS  +RA  +A R S G K  P  A + F +PKQ+PL+   RI RSPVELSCCV
Sbjct: 3  AARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTN--RIFRSPVELSCCV 62

Query: 68 ESLLPYHSATASALLTSMLSVSRRSYGW 93
          E++LPYH+ATASALL SMLSVSRR  GW
Sbjct: 63 ETMLPYHTATASALLNSMLSVSRR--GW 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038880789.17.5e-3894.74protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X2 [Benincasa hispida][more]
XP_038880792.17.5e-3894.74protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X4 [Benincasa hispida][more]
XP_038880793.17.5e-3894.74protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X5 [Benincasa hispida][more]
XP_038880790.17.5e-3894.74protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X3 [Benincasa hispida]... [more]
XP_038880785.17.5e-3894.74protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X1 [Benincasa hispida]... [more]
Match NameE-valueIdentityDescription
Q93ZJ34.8e-1150.00Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
Match NameE-valueIdentityDescription
A0A0A0KHP82.9e-3589.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518070 PE=4 SV=1[more]
A0A6J1IUA21.6e-3387.37protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X4 ... [more]
A0A6J1EE221.6e-3387.37protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X4 ... [more]
A0A6J1IR781.6e-3387.37protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 ... [more]
A0A6J1IM121.6e-3387.37protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
Match NameE-valueIdentityDescription
AT2G33847.14.1e-1862.79unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc... [more]
AT2G33847.24.1e-1862.79unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc... [more]
AT1G28395.21.6e-1763.64unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G28395.11.6e-1763.64unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G28395.31.6e-1763.64unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043459NFD6/NOXY2-likePANTHERPTHR33156OS02G0230000 PROTEINcoord: 1..96
NoneNo IPR availablePANTHERPTHR33156:SF49SUBFAMILY NOT NAMEDcoord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032902.1MELO3C032902.1mRNA