MELO3C032886 (gene) Melon (DHL92) v4

Overview


Name	MELO3C032886
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Squamosa promoter-binding-like protein
Location	chr08: 1846226 .. 1846597 (-)
RNA-Seq Expression	MELO3C032886
Synteny	MELO3C032886

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATATAGTCATGTGGTTCTTCTAATTTGTTCTATACATATAAGACTTCTCTTAGGAAAATGGCAAACTCAAACGATCACAGTTGGGAGGACATGATTTTAGATGACGATGACGACGACGATAACGACACCGAAGAAGTAGGGTTTGTAGATAATGAGAGGAGGAGGAGATCTGGTTTAACCACTGGTCGTGGTGGCGGCGGAGGGGGAAGGTCAACGGTGGCACGTTGCCAAGCCGATGGCTGCAATGCTGATCTGACTGGTGCGAGACCGTACCACCGCCGCCACAAGGTCTGCGAGTTCCACGCCAAGGCAGCCGTGGTGATTCTGGCCGGATTGGAACAACGATTTTGCCAGCAGTGTAGTAGGTAA

mRNA sequence

TATATATAGTCATGTGGTTCTTCTAATTTGTTCTATACATATAAGACTTCTCTTAGGAAAATGGCAAACTCAAACGATCACAGTTGGGAGGACATGATTTTAGATGACGATGACGACGACGATAACGACACCGAAGAAGTAGGGTTTGTAGATAATGAGAGGAGGAGGAGATCTGGTTTAACCACTGGTCGTGGTGGCGGCGGAGGGGGAAGGTCAACGGTGGCACGTTGCCAAGCCGATGGCTGCAATGCTGATCTGACTGGTGCGAGACCGTACCACCGCCGCCACAAGGTCTGCGAGTTCCACGCCAAGGCAGCCGTGGTGATTCTGGCCGGATTGGAACAACGATTTTGCCAGCAGTGTAGTAGGTAA

Coding sequence (CDS)

ATGGCAAACTCAAACGATCACAGTTGGGAGGACATGATTTTAGATGACGATGACGACGACGATAACGACACCGAAGAAGTAGGGTTTGTAGATAATGAGAGGAGGAGGAGATCTGGTTTAACCACTGGTCGTGGTGGCGGCGGAGGGGGAAGGTCAACGGTGGCACGTTGCCAAGCCGATGGCTGCAATGCTGATCTGACTGGTGCGAGACCGTACCACCGCCGCCACAAGGTCTGCGAGTTCCACGCCAAGGCAGCCGTGGTGATTCTGGCCGGATTGGAACAACGATTTTGCCAGCAGTGTAGTAGGTAA

Protein sequence

MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR

Homology

[Close]

BLAST of MELO3C032886 vs. NCBI nr
Match: XP_008439842.1 (PREDICTED: squamosa promoter-binding protein 1 [Cucumis melo])

HSP 1 Score: 208.4 bits (529), Expect = 3.0e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60
           MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD
Sbjct: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60

Query: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 104
           GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR
Sbjct: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 103

[Close]

BLAST of MELO3C032886 vs. NCBI nr
Match: KAA0052677.1 (squamosa promoter-binding protein 1 [Cucumis melo var. makuwa] >TYK13147.1 squamosa promoter-binding protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 208.4 bits (529), Expect = 3.0e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60
           MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD
Sbjct: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60

Query: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 104
           GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR
Sbjct: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 103

[Close]

BLAST of MELO3C032886 vs. NCBI nr
Match: XP_004134953.1 (squamosa promoter-binding protein 1 [Cucumis sativus] >KGN49239.1 hypothetical protein Csa_003123 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 3.5e-43
Identity = 91/103 (88.35%), Postives = 97/103 (94.17%), Query Frame = 0


Query: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60
           MANS D  WEDMI+ DDDDDDND EE+GFVDNERRRRSGLT+ RGGGGGGRSTVARCQAD
Sbjct: 1   MANSEDQGWEDMIV-DDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQAD 60

Query: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 104
           GCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQCSR
Sbjct: 61  GCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 102

[Close]

BLAST of MELO3C032886 vs. NCBI nr
Match: XP_038880830.1 (squamosa promoter-binding protein 1-like [Benincasa hispida])

HSP 1 Score: 165.6 bits (418), Expect = 2.2e-37
Identity = 83/103 (80.58%), Postives = 92/103 (89.32%), Query Frame = 0


Query: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60
           M NS D  WEDM++++DDD+D D EE+GFV++ERRRRS LT GRGG GGGR TVARCQAD
Sbjct: 1   MTNSEDQVWEDMVVEEDDDND-DNEEIGFVEDERRRRSALTGGRGGSGGGRVTVARCQAD 60

Query: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 104
           GCNADL+ ARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR
Sbjct: 61  GCNADLSCARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 102

[Close]

BLAST of MELO3C032886 vs. NCBI nr
Match: XP_023004048.1 (squamosa promoter-binding-like protein 3 [Cucurbita maxima])

HSP 1 Score: 133.3 bits (334), Expect = 1.2e-27
Identity = 66/104 (63.46%), Postives = 87/104 (83.65%), Query Frame = 0


Query: 1   MANSNDHSWEDMI-LDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQA 60
           M NS D  W D +  ++++++++D +EVGFV++ER++R+ +++ R G GGGR++VARCQA
Sbjct: 1   MENSGDQGWGDPVEEEEEEEEEDDDDEVGFVEDERKKRA-VSSSRSGSGGGRTSVARCQA 60

Query: 61  DGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 104
           D CN DL GAR YHRRHKVCEFH+KAAVVILAGLEQRFCQQCSR
Sbjct: 61  DSCNVDLNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSR 103

[Close]

BLAST of MELO3C032886 vs. ExPASy Swiss-Prot
Match: Q2R3Y1 (Putative squamosa promoter-binding-like protein 19 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL19 PE=3 SV=2)

HSP 1 Score: 88.2 bits (217), Expect = 5.9e-17
Identity = 40/61 (65.57%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 43  GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCS 102
           G GGGGGG      C  DGC +DL+  R YHRRHKVCE HAK  VV++AG EQRFCQQCS
Sbjct: 79  GSGGGGGGGGGAEACSVDGCRSDLSRCRDYHRRHKVCEAHAKTPVVVVAGQEQRFCQQCS 138

Query: 103 R 104
           R
Sbjct: 139 R 139

[Close]

BLAST of MELO3C032886 vs. ExPASy Swiss-Prot
Match: A2YFT9 (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica OX=39946 GN=SPL10 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-16
Identity = 39/58 (67.24%), Postives = 46/58 (79.31%), Query Frame = 0


Query: 46  GGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 104
           G GG      RCQA+GC ADL+GA+ YHRRHKVCE+HAKA+VV  +G +QRFCQQCSR
Sbjct: 170 GFGGAHHQPPRCQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSR 227

[Close]

BLAST of MELO3C032886 vs. ExPASy Swiss-Prot
Match: Q0DAE8 (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL10 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-16
Identity = 39/58 (67.24%), Postives = 46/58 (79.31%), Query Frame = 0


Query: 46  GGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 104
           G GG      RCQA+GC ADL+GA+ YHRRHKVCE+HAKA+VV  +G +QRFCQQCSR
Sbjct: 170 GFGGAHHQPPRCQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSR 227

[Close]

BLAST of MELO3C032886 vs. ExPASy Swiss-Prot
Match: Q8GXL3 (Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SPL8 PE=1 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 5.0e-16
Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 0


Query: 43  GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCS 102
           G  G     ST  RCQA+GCNADL+ A+ YHRRHKVCEFH+KA+ V+ AGL QRFCQQCS
Sbjct: 175 GESGMANSLST-PRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCS 234

Query: 103 R 104
           R
Sbjct: 235 R 234

[Close]

BLAST of MELO3C032886 vs. ExPASy Swiss-Prot
Match: Q0J0K1 (Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL18 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-15
Identity = 40/66 (60.61%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 38  SGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRF 97
           S L   RGGGGGG      C  DGC ADL+  R YHRRHKVCE H+K  VV+++G E RF
Sbjct: 96  STLKRPRGGGGGGGGQCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRF 155

Query: 98  CQQCSR 104
           CQQCSR
Sbjct: 156 CQQCSR 161

[Close]

BLAST of MELO3C032886 vs. ExPASy TrEMBL
Match: A0A5A7UDV9 (Squamosa promoter-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007580 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.4e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60
           MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD
Sbjct: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60

Query: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 104
           GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR
Sbjct: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 103

[Close]

BLAST of MELO3C032886 vs. ExPASy TrEMBL
Match: A0A1S3AZN8 (squamosa promoter-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103484510 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.4e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60
           MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD
Sbjct: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60

Query: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 104
           GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR
Sbjct: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 103

[Close]

BLAST of MELO3C032886 vs. ExPASy TrEMBL
Match: A0A0A0KK74 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517960 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.7e-43
Identity = 91/103 (88.35%), Postives = 97/103 (94.17%), Query Frame = 0


Query: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60
           MANS D  WEDMI+ DDDDDDND EE+GFVDNERRRRSGLT+ RGGGGGGRSTVARCQAD
Sbjct: 1   MANSEDQGWEDMIV-DDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQAD 60

Query: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 104
           GCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQCSR
Sbjct: 61  GCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSR 102

[Close]

BLAST of MELO3C032886 vs. ExPASy TrEMBL
Match: A0A6J1KYC6 (Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC111497471 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.9e-28
Identity = 66/104 (63.46%), Postives = 87/104 (83.65%), Query Frame = 0


Query: 1   MANSNDHSWEDMI-LDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQA 60
           M NS D  W D +  ++++++++D +EVGFV++ER++R+ +++ R G GGGR++VARCQA
Sbjct: 1   MENSGDQGWGDPVEEEEEEEEEDDDDEVGFVEDERKKRA-VSSSRSGSGGGRTSVARCQA 60

Query: 61  DGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 104
           D CN DL GAR YHRRHKVCEFH+KAAVVILAGLEQRFCQQCSR
Sbjct: 61  DSCNVDLNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSR 103

[Close]

BLAST of MELO3C032886 vs. ExPASy TrEMBL
Match: A0A6J1CK81 (squamosa promoter-binding protein 1 OS=Momordica charantia OX=3673 GN=LOC111012368 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.5e-26
Identity = 69/99 (69.70%), Postives = 79/99 (79.80%), Query Frame = 0


Query: 8   SWEDMILDDDDDDDND---TEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNA 67
           SW     +D+++++ D     EVGF + ER+ R  L+ GR  GG GRSTVARCQADGCNA
Sbjct: 3   SWGGTPEEDEEEEEEDGGGGGEVGFGEEERKIRRALSGGR-CGGAGRSTVARCQADGCNA 62

Query: 68  DLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 104
           DL+GARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR
Sbjct: 63  DLSGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 100

[Close]

BLAST of MELO3C032886 vs. TAIR 10
Match: AT1G02065.2 (squamosa promoter binding protein-like 8 )

HSP 1 Score: 85.1 bits (209), Expect = 3.6e-17
Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 0


Query: 43  GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCS 102
           G  G     ST  RCQA+GCNADL+ A+ YHRRHKVCEFH+KA+ V+ AGL QRFCQQCS
Sbjct: 175 GESGMANSLST-PRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCS 234

Query: 103 R 104
           R
Sbjct: 235 R 234

[Close]

BLAST of MELO3C032886 vs. TAIR 10
Match: AT1G02065.1 (squamosa promoter binding protein-like 8 )

HSP 1 Score: 85.1 bits (209), Expect = 3.6e-17
Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 0


Query: 43  GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCS 102
           G  G     ST  RCQA+GCNADL+ A+ YHRRHKVCEFH+KA+ V+ AGL QRFCQQCS
Sbjct: 175 GESGMANSLST-PRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCS 234

Query: 103 R 104
           R
Sbjct: 235 R 234

[Close]

BLAST of MELO3C032886 vs. TAIR 10
Match: AT1G53160.2 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 79.3 bits (194), Expect = 2.0e-15
Identity = 44/87 (50.57%), Postives = 56/87 (64.37%), Query Frame = 0


Query: 17  DDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRH 76
           ++D + DT+E   V  +R R S  +  RGG      ++  CQ D C AD+  A+ YHRRH
Sbjct: 20  EEDMETDTDEEEEVGRDRVRGSRGSINRGG------SLRLCQVDRCTADMKEAKLYHRRH 79

Query: 77  KVCEFHAKAAVVILAGLEQRFCQQCSR 104
           KVCE HAKA+ V L+GL QRFCQQCSR
Sbjct: 80  KVCEVHAKASSVFLSGLNQRFCQQCSR 100

[Close]

BLAST of MELO3C032886 vs. TAIR 10
Match: AT1G53160.1 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 79.3 bits (194), Expect = 2.0e-15
Identity = 44/87 (50.57%), Postives = 56/87 (64.37%), Query Frame = 0


Query: 17  DDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRH 76
           ++D + DT+E   V  +R R S  +  RGG      ++  CQ D C AD+  A+ YHRRH
Sbjct: 20  EEDMETDTDEEEEVGRDRVRGSRGSINRGG------SLRLCQVDRCTADMKEAKLYHRRH 79

Query: 77  KVCEFHAKAAVVILAGLEQRFCQQCSR 104
           KVCE HAKA+ V L+GL QRFCQQCSR
Sbjct: 80  KVCEVHAKASSVFLSGLNQRFCQQCSR 100

[Close]

BLAST of MELO3C032886 vs. TAIR 10
Match: AT2G42200.1 (squamosa promoter binding protein-like 9 )

HSP 1 Score: 77.8 bits (190), Expect = 5.7e-15
Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 0


Query: 44  RGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 103
           RGGG G    + RCQ +GC  DLT A+ Y+ RH+VC  H+K   V +AG+EQRFCQQCSR
Sbjct: 61  RGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSR 120

The following BLAST results are available for this feature:

BLAST of MELO3C032886 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439842.1	3.0e-50	100.00	PREDICTED: squamosa promoter-binding protein 1 [Cucumis melo]	[more]
KAA0052677.1	3.0e-50	100.00	squamosa promoter-binding protein 1 [Cucumis melo var. makuwa] >TYK13147.1 squam...	[more]
XP_004134953.1	3.5e-43	88.35	squamosa promoter-binding protein 1 [Cucumis sativus] >KGN49239.1 hypothetical p...	[more]
XP_038880830.1	2.2e-37	80.58	squamosa promoter-binding protein 1-like [Benincasa hispida]	[more]
XP_023004048.1	1.2e-27	63.46	squamosa promoter-binding-like protein 3 [Cucurbita maxima]	[more]

BLAST of MELO3C032886 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2R3Y1	5.9e-17	65.57	Putative squamosa promoter-binding-like protein 19 OS=Oryza sativa subsp. japoni...	[more]
A2YFT9	1.0e-16	67.24	Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica OX=39946...	[more]
Q0DAE8	1.0e-16	67.24	Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q8GXL3	5.0e-16	67.21	Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SPL8...	[more]
Q0J0K1	1.1e-15	60.61	Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of MELO3C032886 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UDV9	1.4e-50	100.00	Squamosa promoter-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3AZN8	1.4e-50	100.00	squamosa promoter-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103484510 PE=4...	[more]
A0A0A0KK74	1.7e-43	88.35	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517960 PE...	[more]
A0A6J1KYC6	5.9e-28	63.46	Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC1114974...	[more]
A0A6J1CK81	5.5e-26	69.70	squamosa promoter-binding protein 1 OS=Momordica charantia OX=3673 GN=LOC1110123...	[more]

BLAST of MELO3C032886 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02065.2	3.6e-17	67.21	squamosa promoter binding protein-like 8	[more]
AT1G02065.1	3.6e-17	67.21	squamosa promoter binding protein-like 8	[more]
AT1G53160.2	2.0e-15	50.57	squamosa promoter binding protein-like 4	[more]
AT1G53160.1	2.0e-15	50.57	squamosa promoter binding protein-like 4	[more]
AT2G42200.1	5.7e-15	56.67	squamosa promoter binding protein-like 9	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 57..103 e-value: 2.2E-18 score: 66.3
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 54..103 score: 20.53763
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 53..103 e-value: 5.3E-24 score: 86.3
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 55..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 38..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032886.1	MELO3C032886.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding