MELO3C032883.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C032883.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 1539411 .. 1544521 (-)
RNA-Seq ExpressionMELO3C032883.jh1
SyntenyMELO3C032883.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATAAAATAATGCCGTTGGCCAATTTCTCTCTTCAGTTTTCTTCTTCACTCTCCGTCCAATCTCCAAACCCTAATTTCTAAAATGCAATTCCGATCCACAAGTTATCTTACTACCTCGTTCTCCTTTGTGCTGGGGACCTTCATTCTCTTATCTTACATGTCTTGGAGCACCGGAGTCATGGGAGGTCGCCGATTTTGACGTAGTCACGAGTCGATTGATGCTCCCTTCTTCACCCCCTAAGAAGAATTCCAAATCCTTGGACTACACTCTTGCCGATGCTGCTCCTTCGTATCATTTTTCATCCGCTTCGTTGCTTCGGCTTCTTCTGCTCTCGATAGGGTTTCCGAGGATGCTATCAATCCGGTTGATCAGTTCCTTCGTGAGGAGGCTTTGCACAACCCTGGCGAGCGTCTATATCAAGTAAGTTCTTTATTTAGCTTTCCCGTATCATGGATGGTGTGATTGGTTTCAGGAGTTCTCTAATGTCATGTTCGGTAGAGAGAGGAGAAAATTAAAAGCTGCTAGCAACGGCCTTCTCGAGGCTTTGTTTATTTAGCTGCTGGCTTTCCCTCAAATTGGGTTCCGTTAAATGCAATTCTTTTTAATCCTGCATTTATGTGAATTTTTTATAGGTAGTGCCAGTTTACCTTTCTAATGTTTCTTTTGACATCATTACCAATTACTCTTTCGGACATATACGCTATAAGTCCATAACCAACTATCACAACCACACAACATTCTTTTGTTTTCCAGTTTATTAAGGTTGATTTACCTTCAATAACGTTGTTATGTCTGAATAATTGCTGTTTTGGGTGGATGAAGGATTACGCAACTGTTTTTCTTTTCTGTGAAGATCTGCATTAACTTTTTCCATCTTAATAATCATATAATGACAGAACATTCTTCTAAACTGTCTTTCCAGAAGATACTTTCAAAGATTCAATGCAAATTATATCTACAAACTCTTTACAAAATATTTTTCAGAAATATTTTTCGCACGTCTTTTTTCAGTGTTTAATCATTGCTTTCAAACTTCTCTCTTCCAATTTGTTTTTACGAACTCTTTCCATAATATTTACTTCAACTTTCGTCTTTCATTTTGTTTTTGTTTTTGTTTTTTTTTTTTCATTTAAACAGAAGATTTTATAAAGCTTTTAAAAAAACTGCGCGAGCAAGGGTGTTGGCCACACACAAGCCAATGAGCAGCAAAGCAACATGCACACTGTGCGCGGAAGGTGTTGCCTTGGTGCCATCTTTGCACACGCGGAAGAAAACTTTTAAAAAGCTCTTTGCTAGAAATTTTGTCAAACTTTTTCTCTTCCTCTTTTCTTCTAGAAACTCTTTCCAGAACAAATGTATATATTTGTGTGTGTATACATATATATTAGCAAAATCTCTCTTTTAAAAGGTCTATCCAAAAACGTTTTATTCGTGTTTTCTTGCCTCAAATTCTATTTTCGAACTTTTACTATAATATTTTCTTGAACATCCATCGTCCATTTTGTTTTTGTTCTTTTTCTTTTCGAAATAGAACACTTTATAACGCTTTCAAAAAACTGCATGAGCAAGGGTGTTGGCCACACACCAGCCGATGAGCAGCAAAGCAACATACACACTGTGCGCGGAAGGTGTTGCCTTGGTGCCATCTTTGCACATGCGGAAGCAAACTTTTAAAAAGCTCTTAGCAAGAAATTTTGTCAAAATTTTTATCTTCCTCTTTTCTTCTAGAAACTCTTTCCAGAACATATGTATATAGGTGTGTGTATATACATATATATTAGCAAAATCTCTCTTCTAAAAGGTTTATCCAAAAACGTTTTATTCGTGTTTTCTTGCTTCAAATTCTATTTTCGAACTTTTTCTATAATATTTTCTTGAACATCCGTCTTCCATTTTGTTTTTGTTTTTTTCCGAAATAGAACACTCAATAACACTTTCAAAAAACTGCATGAGCAAGGGTGTTGGCCACACACAAGCCAATGAGCAGCAAAGCAACATGCACACTGTGCGCGGAAGGTGTTGCCTTGGTGCCATCTTTGCACATGCAGAAGCAAACTTTTAAAAAGCTTTTTGCTAGAAATTTTGTCAAACTTTTTCTCTTCCTCTTTTCTTCTAGAAAGTCTTTCCAGAACATATGTATATATGTTTGTGTGTGTATATACATATATATTAGCAAATCTCTCTTTTAAAAGGTCCATCCAAAAACGTTTTATTCGTGTTTTCTTGTTTCAAATTCTATTTTCGAACTTTTTCTATAATATTTTCTTGAACATCCATCTTCCATTTTGTTTTTGTTATTTTTTCGAAACAGAACACTTTATATAACGCTTTCAAAAAACTGCATGAGCAAGGTTGTTGGCCACACACAAGCCAATGAGCAGCAAAGCAACATGCACACTGTGCGCGGAAGGTGTTGCCTTGGTGCCATCTTTGCACATGCGGAAGCAAACTTTTAAAAAGCTCTTTGCTAGAAATTTTGTCAAACTTTTTCTCTTCCTCTTTTCTTCTAGAAATTCTTTCCAGAACATATGTATATATGTTTGTGTGTGTATATACATATATATTAGCAAATCTCTCTTTTAAAAGGTCTATCCAAAAACATTTTATTCGTGTTTTCTTGTTTCAAATTCTATTTTCGAACTTTTTCTATAATATTTTCTTGAACATCCATCTTCCATTTTGTTTTTGTTATTTCTTCGAAACAGAACACTTTATAACGCTTTCAAAAAACTGCATGAGCAAGGTTGTTGGCCACACACAAGCCAGTGAGCAGCAAAGCAACATGCACACTGTGCGCGGAAGGTGTTGCCTTGGTGCCATCTTTGCACATGCGGAAGCAAACTTTTAAAAAGCTCTTTGCTACAAATTTTGTCAAACTTTTTCTCTTCCTCTTTTCTTTTAGAAATTCTTTCCAGAACATATGTATATATGTTTGTGTGTGTATATACATATATATTAGCAAATCTCTCGTTTAAAAGGTCTATCCAAAAACGTTTTATTCGTGTTTTCTTGTTTCAAATTCTATTTTCGAACTTTTTCTATAATATTTTCTTGAACATCCATCTTCCATTTTGTTTTTGTTATTTTTTCGAAACAGAACACTTTATAACTCTTTCAAAAAACTGAATGAGCAAGGTTGTTGGCCACAGACAAGCCAATGAGCAGCAAAGCCACATGCACACTGTGTGCGGAAGGTGTTGCCTTGGTGCCATCTTTGCACATGCTGAAGCAAACTTTTAAAAAGCTCTTTGCTAGAAATTTTGTCAAACGTTTTCTCTTCCTCTTTTCTTCTAGAAATTCTTTCCAGAACATATGTATATATGTTTGTGTGTATATATACATATATATTAGCAAATCTCTCTTTTAAAAGGTCTATCCAAAAACGTTTTATTTGTGTTTTCTTGTTTCAAATTCTATTTTCGAACTTTTTCTATAATATTTTCTTGAACATCCATCTTCCATTTTGGTTTTGTTATTTTTTCGAAACAGAACACTTTATAACGCTTTCAAAAAACTGCATGAGCAAGGTTGTTGGCCACACACATGCCAATGAGCAGCAAAGCAGCATGCACACTGTGCGCGGAAGGTGTTGCCTTGGTGCCATCTTTGCACATGCGGAAGCAAACTTTTAAAAAGCTCTTTGCTAGAAATTTTGTCAAACTTTTTCTCTTCCTCTTTTCTTCTAGAAATTCTTTCCAGAACATATGTATATATGTTTGACATATGTTTGTGTGTGTATATACGTATATATTAGCAAATCTCTCTTTTAAAAGGTCTATCCAAAAACGTTTTATTCATGTTTTCTTGTTTCAAATTCTATTTTCGAACCTTTTCTATAATATTTTCTTGAACATCCATCTTCCATTTTGTGTTTGTTATTTTTTCGAAACAGAACACTTTATAACGCTTTCAAAAAACTGCATGAGCAAGGTTGTTGGCCACACACAAGCCAATGAGCAGCAAAGCAACATGCACACTGTGCGCGGAAGGTGTTGCCTTGGTGCCGTCTTTGCACATGCGGAAGCACACTTTTAAAAAGCTCTTTGCTAGAAATTTTGTCAAACGTTTTCTCTTCCTCTTTTCTTCTAGAAACTCTTTCCAGAGCATTTGTTGTATATATGTTTGTGTGTATATATACATATATTAACAAAATCTCTTATTTAAAAGTCTATCCAAAAACGTTCTCTAAGTATTTTTCACTGCAAATTTTGTTTATAAACTCGGTTCTGAATATTTTCTTGAACTTTCGTCTTCAGTTTTTGTACAAATTAAAAAAAAAACATGTTGAAGAACTTTCAAAATACTCCACAAGCAGTGAAAATAATTATTGTGTTACTTTTCTTCTCTTTTTTCCTCTAAAGAACCCTTTCCCGAACACATTTTTAAACTTCTCTCCATTTTTGATTTTGCAAAAGGAATTCTGTGTTTAAATATTATTTAAGATTGATTTTTCACTATTGTATTATTCTATATCTTACATTTATGTCTTCATTATTGGGTCTGTTCTATAACTTTTCTCATAAATTTTTATATAAATTGCAATTGTTGTATAACATTTATCAATTTAGAAAAATCTGAGGCGATTAAAGAAAAGCTGATTGTCCGGAAATCAGTTTTTACTATTCATCACCCCATCTCGAGGTCCCCCTTTGGTTGCTTTTTTTATTTTCTTTAAATTAAGTCTATAAATACTCATTCTACCTTCGCTTGGCTAATTCCTCCGTCTAGAAATCCAAGTGAATTCTCAACAATGTATCTCCGTCGAACCCTTCCGGTAGCAGTGGCAACAAGAATAATCGGATCAATCAGTAAACCCTAGGTGTTGCATGGGGAGCCAATTCCGATTCATCCTCTCGCGAATCTCCCTATTCAGATTTTGTAGGGTTTTCTTCTTCTTTTTTTTTCCCTCTTCTTTTTGACATGTTTTTAATTGTTAAATTGGAAGGAAAATGGCGGTAATTTGAATTTCACCTTTGCTCTTTGGAAGAAAGTTTGGTTAGTTGAATTACCGTTTTTCTAGTAACTTTAGCTTCTTAATTCTACATGAATTTAAGTGATTTTTTGAGTCTTGAAGGGGCGTTATGAAAGGATTAGCTTCTTAATTCGTTCAGGATTTTTGGTATGTTGTGATTCAAACTAATGTGGTGTCTTTATTGAAATTTCTCCCTCAACTACTTTGCTCTGAACCCAGTTATATGGTAGAAAAGAATAGAAAACTGCACAATCAGCTTAACCTTTATGCTTCAAGTGCTTCACATATTGATGTGAACTCGGGAAATCAAATATTTTTGACCCTGGTAGTCAATGTGGATCTCATTTCTCGGTTTCTAGGGTTTCGTTACCAACTTGCAAGAGATGGCATGATCAGAAAATATTGGCCATCTCTTGTTGCTGTACATAGTGATTCCTGTGGCTATCTCTTGGTTGCTCTCTGTGGCTTTCAATTTTGGAGCAAGGCTTGACCAAATCAAAAGGTAAAACTGTTCCTCTTTCGAATTTTTGCTTGCGAGCTTTAGGTTAGGTTATGTTAAATGCAATTCTTTTTAGTCCTGCATTTATGTGAACTTTATAGGTAATGCCAATTTACTTTTCTAATGTATCTT

mRNA sequence

AAATAAAATAATGCCGTTGGCCAATTTCTCTCTTCAGTTTTCTTCTTCACTCTCCGTCCAATCTCCAAACCCTAATTTCTAAAATGCAATTCCGATCCACAAGTTATCTTACTACCTCGTTCTCCTTTGTGCTGGGGACCTTCATTCTCTTATCTTACATGTCTTGGAGCACCGGAGTCATGGGAGGTCGCCGATTTTGACGTAGTCACGAGTCGATTGATGCTCCCTTCTTCACCCCCTAAGAAGAATTCCAAATCCTTGGACTACACTCTTGCCGATGCTGCTCCTTCGTATCATTTTTCATCCGCTTCGTTGCTTCGGCTTCTTCTGCTCTCGATAGGGTTTCCGAGGATGCTATCAATCCGGTTGATCAGTTCCTTCGTGAGGAGGCTTTGCACAACCCTGGCGAGCGTCTATATCAAGGTTTCGTTACCAACTTGCAAGAGATGGCATGATCAGAAAATATTGGCCATCTCTTGTTGCTGTACATAGTGATTCCTGTGGCTATCTCTTGGTTGCTCTCTGTGGCTTTCAATTTTGGAGCAAGGCTTGACCAAATCAAAAGGTAAAACTGTTCCTCTTTCGAATTTTTGCTTGCGAGCTTTAGGTTAGGTTATGTTAAATGCAATTCTTTTTAGTCCTGCATTTATGTGAACTTTATAGGTAATGCCAATTTACTTTTCTAATGTATCTT

Coding sequence (CDS)

ATGCTCCCTTCTTCACCCCCTAAGAAGAATTCCAAATCCTTGGACTACACTCTTGCCGATGCTGCTCCTTCGTATCATTTTTCATCCGCTTCGTTGCTTCGGCTTCTTCTGCTCTCGATAGGGTTTCCGAGGATGCTATCAATCCGGTTGATCAGTTCCTTCGTGAGGAGGCTTTGCACAACCCTGGCGAGCGTCTATATCAAGGTTTCGTTACCAACTTGCAAGAGATGGCATGATCAGAAAATATTGGCCATCTCTTGTTGCTGTACATAG

Protein sequence

MLPSSPPKKNSKSLDYTLADAAPSYHFSSASLLRLLLLSIGFPRMLSIRLISSFVRRLCTTLASVYIKVSLPTCKRWHDQKILAISCCCT
Homology
[Close]
BLAST of MELO3C032883.jh1 vs. NCBI nr
Match: KAA0052626.1 (hypothetical protein E6C27_scaffold120G002350 [Cucumis melo var. makuwa] >TYK13201.1 hypothetical protein E5676_scaffold255G008140 [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (312), Expect = 3.90e-35
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MLPSSPPKKNSKSLDYTLADAAPSYHFSSASLLRLLLLSIGFPRMLSIRLISSFVRRLCT 60
          MLPSSPPKKNSKSLDYTLADAAPSYHFSSASLLRLLLLSIGFPRMLSIRLISSFVRRLCT
Sbjct: 1  MLPSSPPKKNSKSLDYTLADAAPSYHFSSASLLRLLLLSIGFPRMLSIRLISSFVRRLCT 60

Query: 61 TLASVYIK 68
          TLASVYIK
Sbjct: 61 TLASVYIK 68

[Close]
BLAST of MELO3C032883.jh1 vs. NCBI nr
Match: XP_038892280.1 (uncharacterized protein LOC120081466 [Benincasa hispida])

HSP 1 Score: 54.3 bits (129), Expect = 6.26e-06
Identity = 26/31 (83.87%), Postives = 30/31 (96.77%), Query Frame = 0 

Query: 1  MLPSSPPKKNSKSLDYTLADAAPSYHFSSAS 31
          MLPSS PKKNSKSLD+++ADAAP+YHFSSAS
Sbjct: 28 MLPSSSPKKNSKSLDHSVADAAPAYHFSSAS 58

[Close]
BLAST of MELO3C032883.jh1 vs. NCBI nr
Match: XP_008446764.1 (PREDICTED: R3H domain-containing protein 2-like [Cucumis melo] >XP_008446765.1 PREDICTED: R3H domain-containing protein 2-like [Cucumis melo])

HSP 1 Score: 48.1 bits (113), Expect = 9.20e-04
Identity = 26/31 (83.87%), Postives = 28/31 (90.32%), Query Frame = 0 

Query: 1  MLPSSPPKKNSKSLDYTLADAAPSYHFSSAS 31
          MLPSS PKKNSKSLD  +ADAAP+YHFSSAS
Sbjct: 28 MLPSSSPKKNSKSLD--VADAAPAYHFSSAS 56

[Close]
BLAST of MELO3C032883.jh1 vs. NCBI nr
Match: KAA0034658.1 (R3H domain-containing protein 2-like [Cucumis melo var. makuwa] >TYK09209.1 R3H domain-containing protein 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 48.1 bits (113), Expect = 9.53e-04
Identity = 26/31 (83.87%), Postives = 28/31 (90.32%), Query Frame = 0 

Query: 1  MLPSSPPKKNSKSLDYTLADAAPSYHFSSAS 31
          MLPSS PKKNSKSLD  +ADAAP+YHFSSAS
Sbjct: 28 MLPSSSPKKNSKSLD--VADAAPAYHFSSAS 56

[Close]
BLAST of MELO3C032883.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UEN7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008140 PE=4 SV=1)

HSP 1 Score: 124 bits (312), Expect = 1.89e-35
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MLPSSPPKKNSKSLDYTLADAAPSYHFSSASLLRLLLLSIGFPRMLSIRLISSFVRRLCT 60
          MLPSSPPKKNSKSLDYTLADAAPSYHFSSASLLRLLLLSIGFPRMLSIRLISSFVRRLCT
Sbjct: 1  MLPSSPPKKNSKSLDYTLADAAPSYHFSSASLLRLLLLSIGFPRMLSIRLISSFVRRLCT 60

Query: 61 TLASVYIK 68
          TLASVYIK
Sbjct: 61 TLASVYIK 68

[Close]
BLAST of MELO3C032883.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BGI0 (R3H domain-containing protein 2-like OS=Cucumis melo OX=3656 GN=LOC103489394 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 4.46e-04
Identity = 26/31 (83.87%), Postives = 28/31 (90.32%), Query Frame = 0 

Query: 1  MLPSSPPKKNSKSLDYTLADAAPSYHFSSAS 31
          MLPSS PKKNSKSLD  +ADAAP+YHFSSAS
Sbjct: 28 MLPSSSPKKNSKSLD--VADAAPAYHFSSAS 56

[Close]
BLAST of MELO3C032883.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CFX4 (R3H domain-containing protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002020 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 4.61e-04
Identity = 26/31 (83.87%), Postives = 28/31 (90.32%), Query Frame = 0 

Query: 1  MLPSSPPKKNSKSLDYTLADAAPSYHFSSAS 31
          MLPSS PKKNSKSLD  +ADAAP+YHFSSAS
Sbjct: 28 MLPSSSPKKNSKSLD--VADAAPAYHFSSAS 56

The following BLAST results are available for this feature:
BLAST of MELO3C032883.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0052626.13.90e-35100.00hypothetical protein E6C27_scaffold120G002350 [Cucumis melo var. makuwa] >TYK132... [more]
XP_038892280.16.26e-0683.87uncharacterized protein LOC120081466 [Benincasa hispida][more]
XP_008446764.19.20e-0483.87PREDICTED: R3H domain-containing protein 2-like [Cucumis melo] >XP_008446765.1 P... [more]
KAA0034658.19.53e-0483.87R3H domain-containing protein 2-like [Cucumis melo var. makuwa] >TYK09209.1 R3H ... [more]
BLAST of MELO3C032883.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C032883.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UEN71.89e-35100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BGI04.46e-0483.87R3H domain-containing protein 2-like OS=Cucumis melo OX=3656 GN=LOC103489394 PE=... [more]
A0A5D3CFX44.61e-0483.87R3H domain-containing protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
BLAST of MELO3C032883.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032883.jh1.t2MELO3C032883.jh1.t2mRNA
MELO3C032883.jh1.t1MELO3C032883.jh1.t1mRNA