MELO3C032863.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C032863.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Pectin lyase-like superfamily protein
Location	chr07: 26517549 .. 26518415 (+)
RNA-Seq Expression	MELO3C032863.jh1
Synteny	MELO3C032863.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGCTGGTTTCAGTATTGGTAGCTTGGGAAAAGATGGGATGTCATCCTCTGTAGAAGAAGTGAGAGTTCAAAATTGTCACCTGAAAGGGACCATGTACGGAGCAAGGATCAAAACTTGGCAGGTTTTTGTTTTTCTACATGTTGATACTTTACCTTGATCTGATGTCTTCAAACATGAAGAACTGTGCTGATTCTCTTATTCCATTTCCTTCACTTTAGGGGGGATCTGGATATGCAAGGAAGATATCATTTCAAGGAATCACATTGGATCAAGTTCACAAACCAATCCTGATCAACCAGTATTACTGTAATGGAAAAAACAACTGCAAAAACCAGGTAAAAACAAGAAAATTTATCTTGTACAAGGTTATATGCTAATATAGTCAAAACTCAGATCCAAAAAAATGATTAAGAGTAAAGACTGAACATTCTCTCTTTTAGCAATAGATTTTTCAATATGACTATGCAAAAGGTAAAGTAACACATTAGTAAAATCTAGCAGACATCGGCTGTACAAGTGAGTGATGTTTTGTACCAAGGATTTCACGGAACGTCTGCAACAGAGGTGGCAGTGGAATTAAGTTGCAGTGAGAATATAGCCTGCAGCAACATTGTATTAGAAGATATCGATATAAGATATGCAGATTCCGATAAAATAGCTCAGTCGTCGTGTGACAATGCTCATGGAACATCAACAAATACATTTCCTGCCGTAGATTGCTTGGAGCCGTAGATGAATTTTTGAAAGAAAAGAAAAAAACATCTGAGAATGCATCTAGTGAATGAGGTGATTGGCAGTCTCCTACCAAGAGAAATGATTATATTTCCTTTCTCAGAATACTGATCACGTCAGCCGCATTGGG

mRNA sequence

ATGGTCGCTGGTTTCAGTATTGGTAGCTTGGGAAAAGATGGGATGTCATCCTCTGTAGAAGAAGTGAGAGTTCAAAATTGTCACCTGAAAGGGACCATGTACGGAGCAAGGATCAAAACTTGGCAGGGGGGATCTGGATATGCAAGGAAGATATCATTTCAAGGAATCACATTGGATCAAGTTCACAAACCAATCCTGATCAACCAGTATTACTGTAATGGAAAAAACAACTGCAAAAACCAGACATCGGCTGTACAAGTGAGTGATGTTTTGTACCAAGGATTTCACGGAACGTCTGCAACAGAGGTGGCAGTGGAATTAAGTTGCAGTGAGAATATAGCCTGCAGCAACATTGTATTAGAAGATATCGATATAAGATATGCAGATTCCGATAAAATAGCTCAGTCGTCGTGTGACAATGCTCATGGAACATCAACAAATACATTTCCTGCCGTAGATTGCTTGGAGCCGTAGATGAATTTTTGAAAGAAAAGAAAAAAACATCTGAGAATGCATCTAGTGAATGAGGTGATTGGCAGTCTCCTACCAAGAGAAATGATTATATTTCCTTTCTCAGAATACTGATCACGTCAGCCGCATTGGG

Coding sequence (CDS)

ATGGTCGCTGGTTTCAGTATTGGTAGCTTGGGAAAAGATGGGATGTCATCCTCTGTAGAAGAAGTGAGAGTTCAAAATTGTCACCTGAAAGGGACCATGTACGGAGCAAGGATCAAAACTTGGCAGGGGGGATCTGGATATGCAAGGAAGATATCATTTCAAGGAATCACATTGGATCAAGTTCACAAACCAATCCTGATCAACCAGTATTACTGTAATGGAAAAAACAACTGCAAAAACCAGACATCGGCTGTACAAGTGAGTGATGTTTTGTACCAAGGATTTCACGGAACGTCTGCAACAGAGGTGGCAGTGGAATTAAGTTGCAGTGAGAATATAGCCTGCAGCAACATTGTATTAGAAGATATCGATATAAGATATGCAGATTCCGATAAAATAGCTCAGTCGTCGTGTGACAATGCTCATGGAACATCAACAAATACATTTCCTGCCGTAGATTGCTTGGAGCCGTAG

Protein sequence

MVAGFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHKPILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDIDIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP

Homology

[Close]

BLAST of MELO3C032863.jh1 vs. NCBI nr
Match: XP_016901480.1 (PREDICTED: probable polygalacturonase At3g15720 [Cucumis melo])

HSP 1 Score: 314 bits (805), Expect = 1.13e-105
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK
Sbjct: 162 GISIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 221

Query: 64  PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI 123
           PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI
Sbjct: 222 PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI 281

Query: 124 DIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP 157
           DIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP
Sbjct: 282 DIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP 315

[Close]

BLAST of MELO3C032863.jh1 vs. NCBI nr
Match: TYK29564.1 (putative polygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 314 bits (805), Expect = 3.71e-104
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK
Sbjct: 271 GISIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 330

Query: 64  PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI 123
           PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI
Sbjct: 331 PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI 390

Query: 124 DIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP 157
           DIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP
Sbjct: 391 DIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP 424

[Close]

BLAST of MELO3C032863.jh1 vs. NCBI nr
Match: KAA0044437.1 (putative polygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 306 bits (784), Expect = 7.61e-101
Identity = 153/164 (93.29%), Postives = 153/164 (93.29%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK
Sbjct: 271 GISIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 330

Query: 64  PILINQYYCNGKNNCKNQ----------TSAVQVSDVLYQGFHGTSATEVAVELSCSENI 123
           PILINQYYCNGKNNCKNQ          TSAVQVSDVLYQGFHGTSATEVAVELSCSENI
Sbjct: 331 PILINQYYCNGKNNCKNQVKTRKFILYKTSAVQVSDVLYQGFHGTSATEVAVELSCSENI 390

Query: 124 ACSNIVLEDIDIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP 157
           ACSNIVLEDIDIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP
Sbjct: 391 ACSNIVLEDIDIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP 434

[Close]

BLAST of MELO3C032863.jh1 vs. NCBI nr
Match: KAE8649058.1 (hypothetical protein Csa_014993 [Cucumis sativus])

HSP 1 Score: 290 bits (743), Expect = 2.14e-95
Identity = 139/154 (90.26%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLGKDG SSSVE+VRVQNCHLKGTMYGARIKTWQGG+GYARKISFQGITLDQVHK
Sbjct: 224 GISIGSLGKDGTSSSVEDVRVQNCHLKGTMYGARIKTWQGGAGYARKISFQGITLDQVHK 283

Query: 64  PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI 123
           PILI+QYYCNGK +CKNQTSAV+VSDVLYQG HGTSATEVAVELSCSE + C NIVLEDI
Sbjct: 284 PILIDQYYCNGKTDCKNQTSAVEVSDVLYQGLHGTSATEVAVELSCSETVGCRNIVLEDI 343

Query: 124 DIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP 157
           DIRYADSDKIAQSSCD+AHGTSTNTFPAVDCL+P
Sbjct: 344 DIRYADSDKIAQSSCDDAHGTSTNTFPAVDCLKP 377

[Close]

BLAST of MELO3C032863.jh1 vs. NCBI nr
Match: XP_031739947.1 (probable polygalacturonase At3g15720 [Cucumis sativus])

HSP 1 Score: 282 bits (722), Expect = 1.09e-92
Identity = 139/164 (84.76%), Postives = 147/164 (89.63%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLGKDG SSSVE+VRVQNCHLKGTMYGARIKTWQGG+GYARKISFQGITLDQVHK
Sbjct: 179 GISIGSLGKDGTSSSVEDVRVQNCHLKGTMYGARIKTWQGGAGYARKISFQGITLDQVHK 238

Query: 64  PILINQYYCNGKNNCKNQ----------TSAVQVSDVLYQGFHGTSATEVAVELSCSENI 123
           PILI+QYYCNGK +CKNQ          TSAV+VSDVLYQG HGTSATEVAVELSCSE +
Sbjct: 239 PILIDQYYCNGKTDCKNQVKTGKFNLYKTSAVEVSDVLYQGLHGTSATEVAVELSCSETV 298

Query: 124 ACSNIVLEDIDIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP 157
            C NIVLEDIDIRYADSDKIAQSSCD+AHGTSTNTFPAVDCL+P
Sbjct: 299 GCRNIVLEDIDIRYADSDKIAQSSCDDAHGTSTNTFPAVDCLKP 342

[Close]

BLAST of MELO3C032863.jh1 vs. ExPASy Swiss-Prot
Match: Q9LW07 (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 8.4e-39
Identity = 84/157 (53.50%), Postives = 109/157 (69.43%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLGKDG +++VE V VQNC+ +GTM GARIKTWQGGSGYAR I+F GITLD V  
Sbjct: 234 GISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVEN 293

Query: 64  PILINQYYCNG-KNNCKN-QTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLE 123
           PI+I+Q+Y  G  +N K+ ++SAV+VS V++  F GTS +E  V+  CSE + C+ I L 
Sbjct: 294 PIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLR 353

Query: 124 DIDIRYAD--SDKIAQSSCDNAHGTSTNTFPAVDCLE 157
           D+ I  A   S ++AQ  C N  G ST   P ++CLE
Sbjct: 354 DMKIETASSGSGQVAQGQCLNVRGASTIAVPGLECLE 390

[Close]

BLAST of MELO3C032863.jh1 vs. ExPASy Swiss-Prot
Match: Q94AJ5 (Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g80170 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.4e-30
Identity = 63/152 (41.45%), Postives = 94/152 (61.84%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLGK      V ++ V    +  T  G RIKTWQGGSG   KI F+ I ++ V  
Sbjct: 273 GISIGSLGKSKSWEEVRDITVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSN 332

Query: 64  PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI 123
           PI+I+QYYC+ +  C NQTSA+ + ++ +    GTSA++ A+++SCS++  C NI+L+DI
Sbjct: 333 PIIIDQYYCDSRKPCANQTSAISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDI 392

Query: 124 DIRYADSDKIAQSSCDNAHGTSTNTFPAVDCL 156
           D+  ++ D   +S C  A+G+S+       CL
Sbjct: 393 DLEPSNGDGFTESFCWEAYGSSSGQVYPPPCL 424

[Close]

BLAST of MELO3C032863.jh1 vs. ExPASy Swiss-Prot
Match: P48979 (Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.1e-29
Identity = 68/153 (44.44%), Postives = 90/153 (58.82%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTW-QGGSGYARKISFQGITLDQVH 63
           G SIGSLGK+   + V+ V V+     GT  G RIK+W +  +G+AR I FQ  T+  V 
Sbjct: 243 GISIGSLGKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVE 302

Query: 64  KPILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLED 123
            PI+I+Q+YC     C  Q S VQ+SDV Y+  HGTSATEVAV+  CS    C  I LED
Sbjct: 303 NPIVIDQHYCPDNKGCPGQVSGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLED 362

Query: 124 IDIRYADSDKIAQSSCDNAHGTSTNTFPAVDCL 156
           + + Y   ++ A+SSC +A GT+        CL
Sbjct: 363 VKLTY--KNQAAESSCSHADGTTEGVVQPTSCL 393

[Close]

BLAST of MELO3C032863.jh1 vs. ExPASy Swiss-Prot
Match: Q9FY19 (Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.5e-29
Identity = 68/155 (43.87%), Postives = 91/155 (58.71%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLGK    S V  V +       T  G RIKTWQGGSG A  I+++ + +     
Sbjct: 280 GMSIGSLGKGNSRSEVSFVHLDGAKFIDTQNGLRIKTWQGGSGLASHITYENVEMINAEN 339

Query: 64  PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI 123
           PILINQ+YC     CKNQ SAV++ DV ++  HGTSAT  A++L CS+++ CSNI L ++
Sbjct: 340 PILINQFYCTSAAACKNQRSAVKIQDVTFKNIHGTSATTAAIQLMCSDSVPCSNIKLSNV 399

Query: 124 DIRYADSDKIAQSSCDNAHGTSTNTF-PAVDCLEP 158
            ++   S K+A     NA+G  TN   P+   L P
Sbjct: 400 FLKLT-SGKVATCVNKNANGYYTNPLNPSCKSLHP 433

[Close]

BLAST of MELO3C032863.jh1 vs. ExPASy Swiss-Prot
Match: P43212 (Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.6e-29
Identity = 69/155 (44.52%), Postives = 91/155 (58.71%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLG++   + V  V V       T  G RIKTWQGGSG A  I ++ + +     
Sbjct: 279 GISIGSLGRENSRAEVSYVHVNGAKFIDTQNGLRIKTWQGGSGMASHIIYENVEMINSEN 338

Query: 64  PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI 123
           PILINQ+YC   + C+NQ SAVQ+ DV Y+   GTSAT  A++L CS+++ C +I L DI
Sbjct: 339 PILINQFYCTSASACQNQRSAVQIQDVTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDI 398

Query: 124 DIRYADSDKIAQSSCDNAHG-TSTNTFPAVDCLEP 158
            ++   S KIA    DNA+G  S +  PA   L P
Sbjct: 399 SLKLT-SGKIASCLNDNANGYFSGHVIPACKNLSP 432

[Close]

BLAST of MELO3C032863.jh1 vs. ExPASy TrEMBL
Match: A0A1S4E0H6 (probable polygalacturonase At3g15720 OS=Cucumis melo OX=3656 GN=LOC107990323 PE=3 SV=1)

HSP 1 Score: 314 bits (805), Expect = 5.45e-106
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK
Sbjct: 162 GISIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 221

Query: 64  PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI 123
           PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI
Sbjct: 222 PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI 281

Query: 124 DIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP 157
           DIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP
Sbjct: 282 DIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP 315

[Close]

BLAST of MELO3C032863.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E161 (Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001700 PE=3 SV=1)

HSP 1 Score: 314 bits (805), Expect = 1.80e-104
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK
Sbjct: 271 GISIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 330

Query: 64  PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI 123
           PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI
Sbjct: 331 PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI 390

Query: 124 DIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP 157
           DIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP
Sbjct: 391 DIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP 424

[Close]

BLAST of MELO3C032863.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TRF1 (Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001690 PE=3 SV=1)

HSP 1 Score: 306 bits (784), Expect = 3.68e-101
Identity = 153/164 (93.29%), Postives = 153/164 (93.29%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK
Sbjct: 271 GISIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 330

Query: 64  PILINQYYCNGKNNCKNQ----------TSAVQVSDVLYQGFHGTSATEVAVELSCSENI 123
           PILINQYYCNGKNNCKNQ          TSAVQVSDVLYQGFHGTSATEVAVELSCSENI
Sbjct: 331 PILINQYYCNGKNNCKNQVKTRKFILYKTSAVQVSDVLYQGFHGTSATEVAVELSCSENI 390

Query: 124 ACSNIVLEDIDIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP 157
           ACSNIVLEDIDIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP
Sbjct: 391 ACSNIVLEDIDIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP 434

[Close]

BLAST of MELO3C032863.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KTD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004940 PE=3 SV=1)

HSP 1 Score: 290 bits (743), Expect = 3.21e-95
Identity = 139/154 (90.26%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLGKDG SSSVE+VRVQNCHLKGTMYGARIKTWQGG+GYARKISFQGITLDQVHK
Sbjct: 261 GISIGSLGKDGTSSSVEDVRVQNCHLKGTMYGARIKTWQGGAGYARKISFQGITLDQVHK 320

Query: 64  PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI 123
           PILI+QYYCNGK +CKNQTSAV+VSDVLYQG HGTSATEVAVELSCSE + C NIVLEDI
Sbjct: 321 PILIDQYYCNGKTDCKNQTSAVEVSDVLYQGLHGTSATEVAVELSCSETVGCRNIVLEDI 380

Query: 124 DIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP 157
           DIRYADSDKIAQSSCD+AHGTSTNTFPAVDCL+P
Sbjct: 381 DIRYADSDKIAQSSCDDAHGTSTNTFPAVDCLKP 414

[Close]

BLAST of MELO3C032863.jh1 vs. ExPASy TrEMBL
Match: A0A6J1DH67 (probable polygalacturonase At3g15720 OS=Momordica charantia OX=3673 GN=LOC111021047 PE=3 SV=1)

HSP 1 Score: 263 bits (671), Expect = 2.58e-84
Identity = 123/154 (79.87%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLG++G++++VEEVRVQNCHLKGTMYGARIKTWQGGSGYARK+SFQGITLDQV  
Sbjct: 259 GISIGSLGENGVTTNVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKVSFQGITLDQVKN 318

Query: 64  PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI 123
           PILI+QYYCNGKN CKNQTSAVQVSDVLYQGFHGTSATEVA++LSCSE++ CSN+  EDI
Sbjct: 319 PILIDQYYCNGKNGCKNQTSAVQVSDVLYQGFHGTSATEVAIKLSCSESVGCSNLAFEDI 378

Query: 124 DIRYADSDKIAQSSCDNAHGTSTNTFPAVDCLEP 157
           +I+ ADSDKI QSSC N++G STNT PA+DCL P
Sbjct: 379 EIKSADSDKITQSSCYNSNGRSTNTVPAIDCLLP 412

[Close]

BLAST of MELO3C032863.jh1 vs. TAIR 10
Match: AT3G15720.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 161.4 bits (407), Expect = 6.0e-40
Identity = 84/157 (53.50%), Postives = 109/157 (69.43%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLGKDG +++VE V VQNC+ +GTM GARIKTWQGGSGYAR I+F GITLD V  
Sbjct: 234 GISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVEN 293

Query: 64  PILINQYYCNG-KNNCKN-QTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLE 123
           PI+I+Q+Y  G  +N K+ ++SAV+VS V++  F GTS +E  V+  CSE + C+ I L 
Sbjct: 294 PIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLR 353

Query: 124 DIDIRYAD--SDKIAQSSCDNAHGTSTNTFPAVDCLE 157
           D+ I  A   S ++AQ  C N  G ST   P ++CLE
Sbjct: 354 DMKIETASSGSGQVAQGQCLNVRGASTIAVPGLECLE 390

[Close]

BLAST of MELO3C032863.jh1 vs. TAIR 10
Match: AT3G15720.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 161.4 bits (407), Expect = 6.0e-40
Identity = 84/157 (53.50%), Postives = 109/157 (69.43%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLGKDG +++VE V VQNC+ +GTM GARIKTWQGGSGYAR I+F GITLD V  
Sbjct: 230 GISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVEN 289

Query: 64  PILINQYYCNG-KNNCKN-QTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLE 123
           PI+I+Q+Y  G  +N K+ ++SAV+VS V++  F GTS +E  V+  CSE + C+ I L 
Sbjct: 290 PIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLR 349

Query: 124 DIDIRYAD--SDKIAQSSCDNAHGTSTNTFPAVDCLE 157
           D+ I  A   S ++AQ  C N  G ST   P ++CLE
Sbjct: 350 DMKIETASSGSGQVAQGQCLNVRGASTIAVPGLECLE 386

[Close]

BLAST of MELO3C032863.jh1 vs. TAIR 10
Match: AT1G80170.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 1.7e-31
Identity = 63/152 (41.45%), Postives = 94/152 (61.84%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLGK      V ++ V    +  T  G RIKTWQGGSG   KI F+ I ++ V  
Sbjct: 273 GISIGSLGKSKSWEEVRDITVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSN 332

Query: 64  PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI 123
           PI+I+QYYC+ +  C NQTSA+ + ++ +    GTSA++ A+++SCS++  C NI+L+DI
Sbjct: 333 PIIIDQYYCDSRKPCANQTSAISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDI 392

Query: 124 DIRYADSDKIAQSSCDNAHGTSTNTFPAVDCL 156
           D+  ++ D   +S C  A+G+S+       CL
Sbjct: 393 DLEPSNGDGFTESFCWEAYGSSSGQVYPPPCL 424

[Close]

BLAST of MELO3C032863.jh1 vs. TAIR 10
Match: AT1G70500.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 3.6e-29
Identity = 59/153 (38.56%), Postives = 95/153 (62.09%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLG+     +V  V ++   LK T  G RIKTWQGG+GY + + F+ + +  V  
Sbjct: 286 GISIGSLGQGHSKGTVTAVVLETAFLKNTTNGLRIKTWQGGNGYVKGVRFENVVMQDVAN 345

Query: 64  PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI 123
           PI+I+Q+YC+  + C+NQTSAV +S+++Y+   GT+ +  A+   CS+ + CS+IVL +I
Sbjct: 346 PIIIDQFYCDSPSTCQNQTSAVHISEIMYRNITGTTKSSKAINFKCSDAVPCSHIVLNNI 405

Query: 124 DIRYADSDKIAQSSCDNAHGTSTN-TFPAVDCL 156
           ++    +D   ++ C++A G       P+ DCL
Sbjct: 406 NLE--GNDGKVEAYCNSAEGFGYGVVHPSADCL 436

[Close]

BLAST of MELO3C032863.jh1 vs. TAIR 10
Match: AT1G23460.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 124.8 bits (312), Expect = 6.2e-29
Identity = 61/153 (39.87%), Postives = 96/153 (62.75%), Query Frame = 0


Query: 4   GFSIGSLGKDGMSSSVEEVRVQNCHLKGTMYGARIKTWQGGSGYARKISFQGITLDQVHK 63
           G SIGSLGKD  +  V +V +    L+ T  G RIKT+QGGSGY + I F  + +  V  
Sbjct: 286 GISIGSLGKDNTTGIVTQVVLDTALLRETTNGLRIKTYQGGSGYVQGIRFTNVEMQDVAN 345

Query: 64  PILINQYYCNGKNNCKNQTSAVQVSDVLYQGFHGTSATEVAVELSCSENIACSNIVLEDI 123
           PILI+Q+YC+    C+NQTSAV++S ++Y+   GT+ +  A++ +CS+ + CS+IVL ++
Sbjct: 346 PILIDQFYCDSPTTCQNQTSAVKISQIMYRNITGTTKSAKAIKFACSDTVPCSHIVLNNV 405

Query: 124 DIRYADSDKIAQSSCDNAHGTSTNTF-PAVDCL 156
           ++    +D   ++ C++A G       P+ DCL
Sbjct: 406 NLE--GNDGQVEAYCNSAEGFGYGVIHPSADCL 436

The following BLAST results are available for this feature:

BLAST of MELO3C032863.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901480.1	1.13e-105	99.35	PREDICTED: probable polygalacturonase At3g15720 [Cucumis melo]	[more]
TYK29564.1	3.71e-104	99.35	putative polygalacturonase [Cucumis melo var. makuwa]	[more]
KAA0044437.1	7.61e-101	93.29	putative polygalacturonase [Cucumis melo var. makuwa]	[more]
KAE8649058.1	2.14e-95	90.26	hypothetical protein Csa_014993 [Cucumis sativus]	[more]
XP_031739947.1	1.09e-92	84.76	probable polygalacturonase At3g15720 [Cucumis sativus]	[more]

BLAST of MELO3C032863.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW07	8.4e-39	53.50	Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g1572...	[more]
Q94AJ5	2.4e-30	41.45	Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g8017...	[more]
P48979	2.1e-29	44.44	Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1	[more]
Q9FY19	3.5e-29	43.87	Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1	[more]
P43212	4.6e-29	44.52	Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1	[more]

BLAST of MELO3C032863.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E0H6	5.45e-106	99.35	probable polygalacturonase At3g15720 OS=Cucumis melo OX=3656 GN=LOC107990323 PE=...	[more]
A0A5D3E161	1.80e-104	99.35	Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A5A7TRF1	3.68e-101	93.29	Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A0A0KTD6	3.21e-95	90.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004940 PE=3 SV=1	[more]
A0A6J1DH67	2.58e-84	79.87	probable polygalacturonase At3g15720 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]

BLAST of MELO3C032863.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15720.1	6.0e-40	53.50	Pectin lyase-like superfamily protein	[more]
AT3G15720.2	6.0e-40	53.50	Pectin lyase-like superfamily protein	[more]
AT1G80170.1	1.7e-31	41.45	Pectin lyase-like superfamily protein	[more]
AT1G70500.1	3.6e-29	38.56	Pectin lyase-like superfamily protein	[more]
AT1G23460.1	6.2e-29	39.87	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 4..142 e-value: 1.3E-35 score: 123.0
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 2..153 e-value: 8.6E-44 score: 152.1
None	No IPR available	PANTHER	PTHR31375:SF191	POLYGALACTURONASE/GLYCOSIDE HYDROLASE FAMILY PROTEIN	coord: 4..155
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 4..155
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 3..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032863.jh1.t1	MELO3C032863.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity