MELO3C032841 (gene) Melon (DHL92) v4

Overview
NameMELO3C032841
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionChitinase-like protein 1
Locationchr07: 23927995 .. 23929052 (+)
RNA-Seq ExpressionMELO3C032841
SyntenyMELO3C032841
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCAATTCAGAACGGCATTTGATTTAAGTTTTGAAAGTGTATTTATTTTGTTCTAGTAATTGTTTTTGTAATTTCCCACGATATTGTAAAGCGGTTACCAAAACCTTTTGTTCATTCATTTTATTTACATCCTACCAAAATAATTAAGGTTCTACTCATAATGATTTTCTTTTAGTTTGTTTTTTCAAAATTAAATTTATAAATAGGGTATTTTAAAAAATAGGAAAATAATGTGAAATTTAGGAGAGTTTCTTTTTATTTATTTATTGAATGATTTTTTAGTGTCGGTGCAGCATTTCAGTGGGTCCCTTGTCCAGCCTGGAAATTCTGACCATCAATCTTCAATCGGACGGTCCACATTCACCGCTTCCTCTGTACCTTCTTCCTGAGCTCAAATGCTTTCCAATCAATGGCGTCTACAAGCTGAAAGAGACGCTCGATCTAACCTCTCTCTTTAACGCTTCTTCCTTCTCCTTCTCCTCCTTCTTCTTCATTTCCCCATTTTCCCATTTGCAAGTTTCAGACAAACACCCTTCTCAGATCTGTCCAATCCCTGCGGCCATTTCAGGTAAGAACAAAAGTTCATTCTCTTTTCATTGAAATTTTGATTATATCAGCCTGAAATTCATCTTTTTTCTCTCTGGGTTTGCAGTGGGGAGAGGTGAAAATGGCTTTGAATCACTCGCTTCTGATGATACTGGCGCTGATTGTAATGGCGTCTTTTGTGAGTGGGGATGAACCCCCGATTAAGCCGAAGGTTAAGGTTGTGAAGGGGAAGAGGCTTTGCGATAGAGGATGGGAGTGCAGTTGGTCTACTTATTGTTGTAATTTGACCATTACCGACTACTTTGAAACCTATCAATTTGAGAATCTTTTCGCTAAGCGTAATTCGCCGGTGGCTCATGCCGTCGGTTTCTGGGATTTTCATTCCTTCATTCTCGCCGCCGCCCAGTTCGAGCCGCTCGGATTTGGAACAACTGGAGATAAGAAGATGCAGATGAAAGAGCTTGCTGCTTTCTTGGGCCATGTTGGCTCTAAGACCTCTTGTAAGTGA

mRNA sequence

ATGAAGCAATTCAGAACGGCATTTGATTTAAGTTTTGAAAGTTGTCGGTGCAGCATTTCAGTGGGTCCCTTGTCCAGCCTGGAAATTCTGACCATCAATCTTCAATCGGACGGTCCACATTCACCGCTTCCTCTGTACCTTCTTCCTGAGCTCAAATGCTTTCCAATCAATGGCGTCTACAAGCTGAAAGAGACGCTCGATCTAACCTCTCTCTTTAACGCTTCTTCCTTCTCCTTCTCCTCCTTCTTCTTCATTTCCCCATTTTCCCATTTGCAAGTTTCAGACAAACACCCTTCTCAGATCTGTCCAATCCCTGCGGCCATTTCAGTGGGGAGAGGTGAAAATGGCTTTGAATCACTCGCTTCTGATGATACTGGCGCTGATTGTAATGGCGTCTTTTGTGAGTGGGGATGAACCCCCGATTAAGCCGAAGGTTAAGGTTGTGAAGGGGAAGAGGCTTTGCGATAGAGGATGGGAGTGCAGTTGGTCTACTTATTGTTGTAATTTGACCATTACCGACTACTTTGAAACCTATCAATTTGAGAATCTTTTCGCTAAGCGTAATTCGCCGGTGGCTCATGCCGTCGGTTTCTGGGATTTTCATTCCTTCATTCTCGCCGCCGCCCAGTTCGAGCCGCTCGGATTTGGAACAACTGGAGATAAGAAGATGCAGATGAAAGAGCTTGCTGCTTTCTTGGGCCATGTTGGCTCTAAGACCTCTTGTAAGTGA

Coding sequence (CDS)

ATGAAGCAATTCAGAACGGCATTTGATTTAAGTTTTGAAAGTTGTCGGTGCAGCATTTCAGTGGGTCCCTTGTCCAGCCTGGAAATTCTGACCATCAATCTTCAATCGGACGGTCCACATTCACCGCTTCCTCTGTACCTTCTTCCTGAGCTCAAATGCTTTCCAATCAATGGCGTCTACAAGCTGAAAGAGACGCTCGATCTAACCTCTCTCTTTAACGCTTCTTCCTTCTCCTTCTCCTCCTTCTTCTTCATTTCCCCATTTTCCCATTTGCAAGTTTCAGACAAACACCCTTCTCAGATCTGTCCAATCCCTGCGGCCATTTCAGTGGGGAGAGGTGAAAATGGCTTTGAATCACTCGCTTCTGATGATACTGGCGCTGATTGTAATGGCGTCTTTTGTGAGTGGGGATGA

Protein sequence

MKQFRTAFDLSFESCRCSISVGPLSSLEILTINLQSDGPHSPLPLYLLPELKCFPINGVYKLKETLDLTSLFNASSFSFSSFFFISPFSHLQVSDKHPSQICPIPAAISVGRGENGFESLASDDTGADCNGVFCEWG
Homology
[Close]
BLAST of MELO3C032841 vs. NCBI nr
Match: KAA0044632.1 (chitinase-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 3.9e-13
Identity = 41/44 (93.18%), Postives = 41/44 (93.18%), Query Frame = 0 

Query: 19  ISVGPLSSLEILTINLQSDGPHSPLPLYLLPELKCFPINGVYKL 63
           ISVGPLSSLEILTINLQSDGPHSPLPLYLLPELKCFPING   L
Sbjct: 330 ISVGPLSSLEILTINLQSDGPHSPLPLYLLPELKCFPINGTNTL 373

[Close]
BLAST of MELO3C032841 vs. NCBI nr
Match: TYK16956.1 (chitinase-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 3.9e-13
Identity = 41/44 (93.18%), Postives = 41/44 (93.18%), Query Frame = 0 

Query: 19  ISVGPLSSLEILTINLQSDGPHSPLPLYLLPELKCFPINGVYKL 63
           ISVGPLSSLEILTINLQSDGPHSPLPLYLLPELKCFPING   L
Sbjct: 330 ISVGPLSSLEILTINLQSDGPHSPLPLYLLPELKCFPINGTNTL 373

[Close]
BLAST of MELO3C032841 vs. ExPASy TrEMBL
Match: A0A5D3D2G5 (Chitinase-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00950 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.9e-13
Identity = 41/44 (93.18%), Postives = 41/44 (93.18%), Query Frame = 0 

Query: 19  ISVGPLSSLEILTINLQSDGPHSPLPLYLLPELKCFPINGVYKL 63
           ISVGPLSSLEILTINLQSDGPHSPLPLYLLPELKCFPING   L
Sbjct: 330 ISVGPLSSLEILTINLQSDGPHSPLPLYLLPELKCFPINGTNTL 373

[Close]
BLAST of MELO3C032841 vs. ExPASy TrEMBL
Match: A0A5A7TMU8 (Chitinase-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003850 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.9e-13
Identity = 41/44 (93.18%), Postives = 41/44 (93.18%), Query Frame = 0 

Query: 19  ISVGPLSSLEILTINLQSDGPHSPLPLYLLPELKCFPINGVYKL 63
           ISVGPLSSLEILTINLQSDGPHSPLPLYLLPELKCFPING   L
Sbjct: 330 ISVGPLSSLEILTINLQSDGPHSPLPLYLLPELKCFPINGTNTL 373

The following BLAST results are available for this feature:
BLAST of MELO3C032841 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0044632.13.9e-1393.18chitinase-like protein 1 [Cucumis melo var. makuwa][more]
TYK16956.13.9e-1393.18chitinase-like protein 1 [Cucumis melo var. makuwa][more]
BLAST of MELO3C032841 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C032841 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D2G51.9e-1393.18Chitinase-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A5A7TMU81.9e-1393.18Chitinase-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
BLAST of MELO3C032841 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032841.1MELO3C032841.1mRNA