MELO3C032773.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCTGGAGGGTCTGGTTCAAGGCAGCCACAATTCCTTGTGAGGGCTGGGGATGAGAATTTTTCACATGCTCCGTTGATTGAGAACCCGGAAACTGATCAGATTATTGTTCCTGATGTGAGCCTTTTAGTCTTTTTTAATGTTTTGATGGTTAATCCTTGTGAGTTTTCAAATGATATGATAATTATTCATTAAATTGCATTTTGAATGAGATTATGTTAGAGTTTAAGCAACTTGTGTAGGCTATGGACTATTTGGTATGGACAAAAGTGCTGAAGGAATTTTTTTGATTGATAGCTACTGTTGCGTGTTATGTGCAGAAGGAAAGCTGGAAGAACTTTTTTGCATACATGGGCCCGAGATTTCTTGTTTCTATTGCATATATTGATCCTGGGAATTTTAAGATTTCTAGTTTATCTCTTTTGTACACTACTTTTTGATCAGTGGTTTGCCTCTTTTATTCCACTGTGAATGGGATTCTAAAGATTTTGTTTGATTATTCTCAGTCGAGACTAATCTACAATCTAGTGCATAGTACAAGTATGGGGTACGTGGCTGGTCCTTTAGATATAGTTTCTTAACTTTTAACAACCATCAAACACATGATTTGGTGGTCAAAGGCTAAATTTTATTATCATCTTTCAGTCTCTTATCCCAACACCCTTCTATGTGGATAGAAGTAATAAAATAAGTATGTTGCTATGAAGAGATAACGTGACCCATTCACCATAGGCCTCCTCGTTTATAAACATATGTATGGTGCTTGCCTCCAGCCTAATCATAAAATAGATAAGTTTTTTTTTTGTAGATAAGGAACAATCCTTCTATCTTTAGTTTATTTGGGCTTTGTGGCTAAAAAGTGAAAAATTGATGTCACTTTCTAGATCGCAAACAACTAAAGGTATATGGTTGGCTTGATGCGCCGACATCGAGCCTTGTACACTTATGATGGATTTGGAAGGAACTGATGGAAGAGAGCGAGGAGAGGTGCATTGCTATGCCCTTTTTGGTTTTCATGTGTTTCTTTTGCTTGTACTTTCATTTATTTTTGCTTTTTTATTATTTATTTATTTTTTAATTTTCCACAAATGTGTTTGTCAATGTTTTGAATTCAGTATATCATTGCATGCTTCTTTTTGCAGATACACGTATGTGTATGTATATCTGTATGTGTGTGTATGTAAGGATATGTGTGTGTGTGTATGTATGTATGCTTATGTATGTATTTATGCGAACATACTTATATTTTTGTATCATATCAAGCTAAGATGTATACTTTGGTTTTTTCTTAATTTGCTTTTGTCACATTCTTTTTAAGGACGACACTGCATTTGAGAAGCAAAGTACCTCTTTGCGCTTGCCGTGTAAGATATAGTGCTAATAAATATGTGAGTGCCATTAGTTTTGTTTTTCAAATATTTATTTTATCTTGTAACATGTGTTTCAGTTTGATTTTCTTCTAAATTTATTGTTTCTACACTGTCTTGTTTAAGAAGTTGTTATAATTTAATTTAGGTGGTGTCACGATATTGGCCGTGAGCAGGCTGCAAATAAGCCTCTCCTCAAAACTGTATTTCAGGTATTCCCTTTAATCTAGTTGGGGGTCATGGTGTATCTTTTATAGTATTAATTTAATAAATTTTAGTTGTTGTTGTATGCAGGTCATGATGAGATTGTTCAGTCCACATAAAACAACACTAATGTTTGTCATACGTGATAAAACAAGGGTCTGTTAATATTTACTGGGTAGTTTATATCTTGAGCTGTTGTAGAAAAACCATATGTTGTAAGCTTTTAATTTTCTAATTTTCTTTATTGCTTTTGTTAATTTTTTTGTATATAGATACCATTGGAAAATTTAGAGCCTGTTCTTAGAGGATGTACATAA ATGGCTGCTGGAGGGTCTGGTTCAAGGCAGCCACAATTCCTTGTGAGGGCTGGGGATGAGAATTTTTCACATGCTCCGTTGATTGAGAACCCGGAAACTGATCAGATTATTGTTCCTGATTCGAGACTAATCTACAATCTAGTGCATAGTACAAGTATGGGGTGGTGTCACGATATTGGCCGTGAGCAGGCTGCAAATAAGCCTCTCCTCAAAACTGTATTTCAGGTCATGATGAGATTGTTCAGTCCACATAAAACAACACTAATGTTTGTCATACGTGATAAAACAAGGATACCATTGGAAAATTTAGAGCCTGTTCTTAGAGGATGTACATAA ATGGCTGCTGGAGGGTCTGGTTCAAGGCAGCCACAATTCCTTGTGAGGGCTGGGGATGAGAATTTTTCACATGCTCCGTTGATTGAGAACCCGGAAACTGATCAGATTATTGTTCCTGATTCGAGACTAATCTACAATCTAGTGCATAGTACAAGTATGGGGTGGTGTCACGATATTGGCCGTGAGCAGGCTGCAAATAAGCCTCTCCTCAAAACTGTATTTCAGGTCATGATGAGATTGTTCAGTCCACATAAAACAACACTAATGTTTGTCATACGTGATAAAACAAGGATACCATTGGAAAATTTAGAGCCTGTTCTTAGAGGATGTACATAA MAAGGSGSRQPQFLVRAGDENFSHAPLIENPETDQIIVPDSRLIYNLVHSTSMGWCHDIGREQAANKPLLKTVFQVMMRLFSPHKTTLMFVIRDKTRIPLENLEPVLRGCT Homology
BLAST of MELO3C032773.jh1 vs. NCBI nr
Match: TYK30626.1 (metal transporter Nramp1-like [Cucumis melo var. makuwa]) HSP 1 Score: 150 bits (379), Expect = 7.17e-44 Identity = 83/142 (58.45%), Postives = 86/142 (60.56%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. NCBI nr
Match: KAA0057654.1 (metal transporter Nramp1-like [Cucumis melo var. makuwa] >TYK19536.1 metal transporter Nramp1-like [Cucumis melo var. makuwa]) HSP 1 Score: 113 bits (282), Expect = 1.57e-28 Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. NCBI nr
Match: VFR00176.1 (unnamed protein product [Cuscuta campestris]) HSP 1 Score: 109 bits (273), Expect = 6.05e-27 Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. NCBI nr
Match: RZS11876.1 (hypothetical protein BHM03_00043247 [Ensete ventricosum]) HSP 1 Score: 109 bits (273), Expect = 6.19e-27 Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. NCBI nr
Match: KAF5751281.1 (protein ROOT HAIR DEFECTIVE 3 [Tripterygium wilfordii]) HSP 1 Score: 107 bits (268), Expect = 2.40e-26 Identity = 51/54 (94.44%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. ExPASy Swiss-Prot
Match: P93042 (Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RHD3 PE=1 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.0e-23 Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. ExPASy Swiss-Prot
Match: Q9SSN0 (Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g72960 PE=2 SV=2) HSP 1 Score: 107.8 bits (268), Expect = 7.8e-23 Identity = 50/54 (92.59%), Postives = 52/54 (96.30%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. ExPASy Swiss-Prot
Match: Q2QMH2 (Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0604600 PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.7e-22 Identity = 50/54 (92.59%), Postives = 52/54 (96.30%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. ExPASy Swiss-Prot
Match: Q0JLS6 (Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RHD3 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 3.9e-22 Identity = 48/54 (88.89%), Postives = 52/54 (96.30%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. ExPASy Swiss-Prot
Match: Q9FKE9 (Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At5g45160 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.4e-19 Identity = 45/54 (83.33%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E410 (Metal transporter Nramp1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G00430 PE=4 SV=1) HSP 1 Score: 150 bits (379), Expect = 3.47e-44 Identity = 83/142 (58.45%), Postives = 86/142 (60.56%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. ExPASy TrEMBL
Match: A0A5A7URA9 (Metal transporter Nramp1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00300 PE=4 SV=1) HSP 1 Score: 113 bits (282), Expect = 7.61e-29 Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. ExPASy TrEMBL
Match: A0A1J3DQ18 (Protein ROOT HAIR DEFECTIVE 3-like protein 1 (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR8283_c1_g1_i1_g.26849 PE=3 SV=1) HSP 1 Score: 107 bits (268), Expect = 4.19e-28 Identity = 50/54 (92.59%), Postives = 52/54 (96.30%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. ExPASy TrEMBL
Match: A0A0A9CXG3 (GB1/RHD3-type G domain-containing protein OS=Arundo donax OX=35708 PE=3 SV=1) HSP 1 Score: 106 bits (265), Expect = 6.58e-28 Identity = 49/54 (90.74%), Postives = 52/54 (96.30%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. ExPASy TrEMBL
Match: A0A0A9UYH0 (GB1/RHD3-type G domain-containing protein OS=Arundo donax OX=35708 PE=3 SV=1) HSP 1 Score: 106 bits (265), Expect = 7.79e-28 Identity = 49/54 (90.74%), Postives = 52/54 (96.30%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. TAIR 10
Match: AT3G13870.2 (Root hair defective 3 GTP-binding protein (RHD3) ) HSP 1 Score: 109.8 bits (273), Expect = 1.5e-24 Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. TAIR 10
Match: AT3G13870.1 (Root hair defective 3 GTP-binding protein (RHD3) ) HSP 1 Score: 109.8 bits (273), Expect = 1.5e-24 Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. TAIR 10
Match: AT1G72960.1 (Root hair defective 3 GTP-binding protein (RHD3) ) HSP 1 Score: 107.8 bits (268), Expect = 5.5e-24 Identity = 50/54 (92.59%), Postives = 52/54 (96.30%), Query Frame = 0
BLAST of MELO3C032773.jh1 vs. TAIR 10
Match: AT5G45160.1 (Root hair defective 3 GTP-binding protein (RHD3) ) HSP 1 Score: 97.1 bits (240), Expect = 9.8e-21 Identity = 45/54 (83.33%), Postives = 49/54 (90.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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