MELO3C032773.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C032773.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionProtein ROOT HAIR DEFECTIVE 3
Locationchr07: 19170499 .. 19172389 (-)
RNA-Seq ExpressionMELO3C032773.jh1
SyntenyMELO3C032773.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCTGGAGGGTCTGGTTCAAGGCAGCCACAATTCCTTGTGAGGGCTGGGGATGAGAATTTTTCACATGCTCCGTTGATTGAGAACCCGGAAACTGATCAGATTATTGTTCCTGATGTGAGCCTTTTAGTCTTTTTTAATGTTTTGATGGTTAATCCTTGTGAGTTTTCAAATGATATGATAATTATTCATTAAATTGCATTTTGAATGAGATTATGTTAGAGTTTAAGCAACTTGTGTAGGCTATGGACTATTTGGTATGGACAAAAGTGCTGAAGGAATTTTTTTGATTGATAGCTACTGTTGCGTGTTATGTGCAGAAGGAAAGCTGGAAGAACTTTTTTGCATACATGGGCCCGAGATTTCTTGTTTCTATTGCATATATTGATCCTGGGAATTTTAAGATTTCTAGTTTATCTCTTTTGTACACTACTTTTTGATCAGTGGTTTGCCTCTTTTATTCCACTGTGAATGGGATTCTAAAGATTTTGTTTGATTATTCTCAGTCGAGACTAATCTACAATCTAGTGCATAGTACAAGTATGGGGTACGTGGCTGGTCCTTTAGATATAGTTTCTTAACTTTTAACAACCATCAAACACATGATTTGGTGGTCAAAGGCTAAATTTTATTATCATCTTTCAGTCTCTTATCCCAACACCCTTCTATGTGGATAGAAGTAATAAAATAAGTATGTTGCTATGAAGAGATAACGTGACCCATTCACCATAGGCCTCCTCGTTTATAAACATATGTATGGTGCTTGCCTCCAGCCTAATCATAAAATAGATAAGTTTTTTTTTTGTAGATAAGGAACAATCCTTCTATCTTTAGTTTATTTGGGCTTTGTGGCTAAAAAGTGAAAAATTGATGTCACTTTCTAGATCGCAAACAACTAAAGGTATATGGTTGGCTTGATGCGCCGACATCGAGCCTTGTACACTTATGATGGATTTGGAAGGAACTGATGGAAGAGAGCGAGGAGAGGTGCATTGCTATGCCCTTTTTGGTTTTCATGTGTTTCTTTTGCTTGTACTTTCATTTATTTTTGCTTTTTTATTATTTATTTATTTTTTAATTTTCCACAAATGTGTTTGTCAATGTTTTGAATTCAGTATATCATTGCATGCTTCTTTTTGCAGATACACGTATGTGTATGTATATCTGTATGTGTGTGTATGTAAGGATATGTGTGTGTGTGTATGTATGTATGCTTATGTATGTATTTATGCGAACATACTTATATTTTTGTATCATATCAAGCTAAGATGTATACTTTGGTTTTTTCTTAATTTGCTTTTGTCACATTCTTTTTAAGGACGACACTGCATTTGAGAAGCAAAGTACCTCTTTGCGCTTGCCGTGTAAGATATAGTGCTAATAAATATGTGAGTGCCATTAGTTTTGTTTTTCAAATATTTATTTTATCTTGTAACATGTGTTTCAGTTTGATTTTCTTCTAAATTTATTGTTTCTACACTGTCTTGTTTAAGAAGTTGTTATAATTTAATTTAGGTGGTGTCACGATATTGGCCGTGAGCAGGCTGCAAATAAGCCTCTCCTCAAAACTGTATTTCAGGTATTCCCTTTAATCTAGTTGGGGGTCATGGTGTATCTTTTATAGTATTAATTTAATAAATTTTAGTTGTTGTTGTATGCAGGTCATGATGAGATTGTTCAGTCCACATAAAACAACACTAATGTTTGTCATACGTGATAAAACAAGGGTCTGTTAATATTTACTGGGTAGTTTATATCTTGAGCTGTTGTAGAAAAACCATATGTTGTAAGCTTTTAATTTTCTAATTTTCTTTATTGCTTTTGTTAATTTTTTTGTATATAGATACCATTGGAAAATTTAGAGCCTGTTCTTAGAGGATGTACATAA

mRNA sequence

ATGGCTGCTGGAGGGTCTGGTTCAAGGCAGCCACAATTCCTTGTGAGGGCTGGGGATGAGAATTTTTCACATGCTCCGTTGATTGAGAACCCGGAAACTGATCAGATTATTGTTCCTGATTCGAGACTAATCTACAATCTAGTGCATAGTACAAGTATGGGGTGGTGTCACGATATTGGCCGTGAGCAGGCTGCAAATAAGCCTCTCCTCAAAACTGTATTTCAGGTCATGATGAGATTGTTCAGTCCACATAAAACAACACTAATGTTTGTCATACGTGATAAAACAAGGATACCATTGGAAAATTTAGAGCCTGTTCTTAGAGGATGTACATAA

Coding sequence (CDS)

ATGGCTGCTGGAGGGTCTGGTTCAAGGCAGCCACAATTCCTTGTGAGGGCTGGGGATGAGAATTTTTCACATGCTCCGTTGATTGAGAACCCGGAAACTGATCAGATTATTGTTCCTGATTCGAGACTAATCTACAATCTAGTGCATAGTACAAGTATGGGGTGGTGTCACGATATTGGCCGTGAGCAGGCTGCAAATAAGCCTCTCCTCAAAACTGTATTTCAGGTCATGATGAGATTGTTCAGTCCACATAAAACAACACTAATGTTTGTCATACGTGATAAAACAAGGATACCATTGGAAAATTTAGAGCCTGTTCTTAGAGGATGTACATAA

Protein sequence

MAAGGSGSRQPQFLVRAGDENFSHAPLIENPETDQIIVPDSRLIYNLVHSTSMGWCHDIGREQAANKPLLKTVFQVMMRLFSPHKTTLMFVIRDKTRIPLENLEPVLRGCT
Homology
BLAST of MELO3C032773.jh1 vs. NCBI nr
Match: TYK30626.1 (metal transporter Nramp1-like [Cucumis melo var. makuwa])

HSP 1 Score: 150 bits (379), Expect = 7.17e-44
Identity = 83/142 (58.45%), Postives = 86/142 (60.56%), Query Frame = 0

Query: 1   MAAGGSGSRQPQFLVRAGDENFSHAPLIENPETDQIIVPDSRLIYNLVHSTS-------- 60
           MAAGGSGSRQPQFLVR GDENFSHAPLIENPETDQIIVPD     N     S        
Sbjct: 1   MAAGGSGSRQPQFLVRVGDENFSHAPLIENPETDQIIVPDKESWKNFFAYMSPVFLVSIA 60

Query: 61  ----------------------------------MGWCHDIGREQAANKPLLKTVFQVMM 100
                                             + WCHDIGREQAANKP LKTVFQVMM
Sbjct: 61  YIDPGNFEIDLQSSAQYKYGDDTAFEKQSTLFALVVWCHDIGREQAANKPFLKTVFQVMM 120

BLAST of MELO3C032773.jh1 vs. NCBI nr
Match: KAA0057654.1 (metal transporter Nramp1-like [Cucumis melo var. makuwa] >TYK19536.1 metal transporter Nramp1-like [Cucumis melo var. makuwa])

HSP 1 Score: 113 bits (282), Expect = 1.57e-28
Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0

Query: 1   MAAGGSGSRQPQFLVRAGDENFSHAPLIENPETDQIIVPDSRLIYNLVHSTSMGW 55
           MAAGGSGSRQPQFLVRAGDENFSHAPLIENPETDQIIVPDSRLIYNLVHSTSMG+
Sbjct: 154 MAAGGSGSRQPQFLVRAGDENFSHAPLIENPETDQIIVPDSRLIYNLVHSTSMGY 208

BLAST of MELO3C032773.jh1 vs. NCBI nr
Match: VFR00176.1 (unnamed protein product [Cuscuta campestris])

HSP 1 Score: 109 bits (273), Expect = 6.05e-27
Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = 0

Query: 55  WCHDIGREQAANKPLLKTVFQVMMRLFSPHKTTLMFVIRDKTRIPLENLEPVLR 108
           WCHDIGREQAANKPLLKTVFQVMMRLFSP KTTLMFVIRDKTR PLENLEPVLR
Sbjct: 66  WCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLR 119

BLAST of MELO3C032773.jh1 vs. NCBI nr
Match: RZS11876.1 (hypothetical protein BHM03_00043247 [Ensete ventricosum])

HSP 1 Score: 109 bits (273), Expect = 6.19e-27
Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 0

Query: 55  WCHDIGREQAANKPLLKTVFQVMMRLFSPHKTTLMFVIRDKTRIPLENLEPVLRG 109
           WCHDIGREQAANKPLLKTVFQVMMRLFSP KTTL+FVIRDKT+ PLENLEP+LRG
Sbjct: 132 WCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTPLENLEPILRG 186

BLAST of MELO3C032773.jh1 vs. NCBI nr
Match: KAF5751281.1 (protein ROOT HAIR DEFECTIVE 3 [Tripterygium wilfordii])

HSP 1 Score: 107 bits (268), Expect = 2.40e-26
Identity = 51/54 (94.44%), Postives = 51/54 (94.44%), Query Frame = 0

Query: 55  WCHDIGREQAANKPLLKTVFQVMMRLFSPHKTTLMFVIRDKTRIPLENLEPVLR 108
           WCHDIGREQAANKPLLKTVFQVMMRLFSP KTTLMFVI DKTR PLENLEPVLR
Sbjct: 50  WCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIHDKTRTPLENLEPVLR 103

BLAST of MELO3C032773.jh1 vs. ExPASy Swiss-Prot
Match: P93042 (Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RHD3 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.0e-23
Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = 0

Query: 55  WCHDIGREQAANKPLLKTVFQVMMRLFSPHKTTLMFVIRDKTRIPLENLEPVLR 109
           WCHDIGREQAANKPLLKTVFQVMMRLFSP KTTLMFVIRDKTR PLENLEPVLR
Sbjct: 130 WCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLR 183

BLAST of MELO3C032773.jh1 vs. ExPASy Swiss-Prot
Match: Q9SSN0 (Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g72960 PE=2 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 7.8e-23
Identity = 50/54 (92.59%), Postives = 52/54 (96.30%), Query Frame = 0

Query: 55  WCHDIGREQAANKPLLKTVFQVMMRLFSPHKTTLMFVIRDKTRIPLENLEPVLR 109
           WCHDIGREQAANKPLLKTVFQVMMRLFSP KTT++FVIRDKTR PLENLEPVLR
Sbjct: 135 WCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTMLFVIRDKTRTPLENLEPVLR 188

BLAST of MELO3C032773.jh1 vs. ExPASy Swiss-Prot
Match: Q2QMH2 (Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0604600 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-22
Identity = 50/54 (92.59%), Postives = 52/54 (96.30%), Query Frame = 0

Query: 55  WCHDIGREQAANKPLLKTVFQVMMRLFSPHKTTLMFVIRDKTRIPLENLEPVLR 109
           WCHDIGREQAANKPLLKTVFQVMMRLFSP KTTL+FVIRDKTR PLE+LEPVLR
Sbjct: 133 WCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLEHLEPVLR 186

BLAST of MELO3C032773.jh1 vs. ExPASy Swiss-Prot
Match: Q0JLS6 (Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RHD3 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.9e-22
Identity = 48/54 (88.89%), Postives = 52/54 (96.30%), Query Frame = 0

Query: 55  WCHDIGREQAANKPLLKTVFQVMMRLFSPHKTTLMFVIRDKTRIPLENLEPVLR 109
           WCHDIGREQAANKPLLKTVFQVMMRLFSP KTTL+FVIRDK++ PLENLEP+LR
Sbjct: 130 WCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKSKTPLENLEPILR 183

BLAST of MELO3C032773.jh1 vs. ExPASy Swiss-Prot
Match: Q9FKE9 (Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At5g45160 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-19
Identity = 45/54 (83.33%), Postives = 49/54 (90.74%), Query Frame = 0

Query: 55  WCHDIGREQAANKPLLKTVFQVMMRLFSPHKTTLMFVIRDKTRIPLENLEPVLR 109
           WCHDIGREQAANKPLLKTVFQVM+RLFSP KTTL+FVIRDKT+ P+E LE  LR
Sbjct: 133 WCHDIGREQAANKPLLKTVFQVMLRLFSPRKTTLLFVIRDKTKTPIELLERALR 186

BLAST of MELO3C032773.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E410 (Metal transporter Nramp1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G00430 PE=4 SV=1)

HSP 1 Score: 150 bits (379), Expect = 3.47e-44
Identity = 83/142 (58.45%), Postives = 86/142 (60.56%), Query Frame = 0

Query: 1   MAAGGSGSRQPQFLVRAGDENFSHAPLIENPETDQIIVPDSRLIYNLVHSTS-------- 60
           MAAGGSGSRQPQFLVR GDENFSHAPLIENPETDQIIVPD     N     S        
Sbjct: 1   MAAGGSGSRQPQFLVRVGDENFSHAPLIENPETDQIIVPDKESWKNFFAYMSPVFLVSIA 60

Query: 61  ----------------------------------MGWCHDIGREQAANKPLLKTVFQVMM 100
                                             + WCHDIGREQAANKP LKTVFQVMM
Sbjct: 61  YIDPGNFEIDLQSSAQYKYGDDTAFEKQSTLFALVVWCHDIGREQAANKPFLKTVFQVMM 120

BLAST of MELO3C032773.jh1 vs. ExPASy TrEMBL
Match: A0A5A7URA9 (Metal transporter Nramp1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00300 PE=4 SV=1)

HSP 1 Score: 113 bits (282), Expect = 7.61e-29
Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0

Query: 1   MAAGGSGSRQPQFLVRAGDENFSHAPLIENPETDQIIVPDSRLIYNLVHSTSMGW 55
           MAAGGSGSRQPQFLVRAGDENFSHAPLIENPETDQIIVPDSRLIYNLVHSTSMG+
Sbjct: 154 MAAGGSGSRQPQFLVRAGDENFSHAPLIENPETDQIIVPDSRLIYNLVHSTSMGY 208

BLAST of MELO3C032773.jh1 vs. ExPASy TrEMBL
Match: A0A1J3DQ18 (Protein ROOT HAIR DEFECTIVE 3-like protein 1 (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR8283_c1_g1_i1_g.26849 PE=3 SV=1)

HSP 1 Score: 107 bits (268), Expect = 4.19e-28
Identity = 50/54 (92.59%), Postives = 52/54 (96.30%), Query Frame = 0

Query: 55  WCHDIGREQAANKPLLKTVFQVMMRLFSPHKTTLMFVIRDKTRIPLENLEPVLR 108
           WCHDIGREQAANKPLLKTVFQVMMRLFSP KTT++FVIRDKTR PLENLEPVLR
Sbjct: 45  WCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTMLFVIRDKTRTPLENLEPVLR 98

BLAST of MELO3C032773.jh1 vs. ExPASy TrEMBL
Match: A0A0A9CXG3 (GB1/RHD3-type G domain-containing protein OS=Arundo donax OX=35708 PE=3 SV=1)

HSP 1 Score: 106 bits (265), Expect = 6.58e-28
Identity = 49/54 (90.74%), Postives = 52/54 (96.30%), Query Frame = 0

Query: 55  WCHDIGREQAANKPLLKTVFQVMMRLFSPHKTTLMFVIRDKTRIPLENLEPVLR 108
           WCHDIGREQAANKPLLKTVFQVMMRLFSP KTTL+FVIRDK+R PLENLEP+LR
Sbjct: 2   WCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKSRTPLENLEPILR 55

BLAST of MELO3C032773.jh1 vs. ExPASy TrEMBL
Match: A0A0A9UYH0 (GB1/RHD3-type G domain-containing protein OS=Arundo donax OX=35708 PE=3 SV=1)

HSP 1 Score: 106 bits (265), Expect = 7.79e-28
Identity = 49/54 (90.74%), Postives = 52/54 (96.30%), Query Frame = 0

Query: 55  WCHDIGREQAANKPLLKTVFQVMMRLFSPHKTTLMFVIRDKTRIPLENLEPVLR 108
           WCHDIGREQAANKPLLKTVFQVMMRLFSP KTTL+FVIRDK+R PLENLEP+LR
Sbjct: 2   WCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKSRTPLENLEPILR 55

BLAST of MELO3C032773.jh1 vs. TAIR 10
Match: AT3G13870.2 (Root hair defective 3 GTP-binding protein (RHD3) )

HSP 1 Score: 109.8 bits (273), Expect = 1.5e-24
Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = 0

Query: 55  WCHDIGREQAANKPLLKTVFQVMMRLFSPHKTTLMFVIRDKTRIPLENLEPVLR 109
           WCHDIGREQAANKPLLKTVFQVMMRLFSP KTTLMFVIRDKTR PLENLEPVLR
Sbjct: 66  WCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLR 119

BLAST of MELO3C032773.jh1 vs. TAIR 10
Match: AT3G13870.1 (Root hair defective 3 GTP-binding protein (RHD3) )

HSP 1 Score: 109.8 bits (273), Expect = 1.5e-24
Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = 0

Query: 55  WCHDIGREQAANKPLLKTVFQVMMRLFSPHKTTLMFVIRDKTRIPLENLEPVLR 109
           WCHDIGREQAANKPLLKTVFQVMMRLFSP KTTLMFVIRDKTR PLENLEPVLR
Sbjct: 130 WCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLR 183

BLAST of MELO3C032773.jh1 vs. TAIR 10
Match: AT1G72960.1 (Root hair defective 3 GTP-binding protein (RHD3) )

HSP 1 Score: 107.8 bits (268), Expect = 5.5e-24
Identity = 50/54 (92.59%), Postives = 52/54 (96.30%), Query Frame = 0

Query: 55  WCHDIGREQAANKPLLKTVFQVMMRLFSPHKTTLMFVIRDKTRIPLENLEPVLR 109
           WCHDIGREQAANKPLLKTVFQVMMRLFSP KTT++FVIRDKTR PLENLEPVLR
Sbjct: 135 WCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTMLFVIRDKTRTPLENLEPVLR 188

BLAST of MELO3C032773.jh1 vs. TAIR 10
Match: AT5G45160.1 (Root hair defective 3 GTP-binding protein (RHD3) )

HSP 1 Score: 97.1 bits (240), Expect = 9.8e-21
Identity = 45/54 (83.33%), Postives = 49/54 (90.74%), Query Frame = 0

Query: 55  WCHDIGREQAANKPLLKTVFQVMMRLFSPHKTTLMFVIRDKTRIPLENLEPVLR 109
           WCHDIGREQAANKPLLKTVFQVM+RLFSP KTTL+FVIRDKT+ P+E LE  LR
Sbjct: 133 WCHDIGREQAANKPLLKTVFQVMLRLFSPRKTTLLFVIRDKTKTPIELLERALR 186

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK30626.17.17e-4458.45metal transporter Nramp1-like [Cucumis melo var. makuwa][more]
KAA0057654.11.57e-2898.18metal transporter Nramp1-like [Cucumis melo var. makuwa] >TYK19536.1 metal trans... [more]
VFR00176.16.05e-2796.30unnamed protein product [Cuscuta campestris][more]
RZS11876.16.19e-2790.91hypothetical protein BHM03_00043247 [Ensete ventricosum][more]
KAF5751281.12.40e-2694.44protein ROOT HAIR DEFECTIVE 3 [Tripterygium wilfordii][more]
Match NameE-valueIdentityDescription
P930422.0e-2396.30Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RHD3 PE=1 SV=1[more]
Q9SSN07.8e-2392.59Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g7... [more]
Q2QMH21.7e-2292.59Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Oryza sativa subsp. japonica OX=39947... [more]
Q0JLS63.9e-2288.89Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RHD3 P... [more]
Q9FKE91.4e-1983.33Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At5g4... [more]
Match NameE-valueIdentityDescription
A0A5D3E4103.47e-4458.45Metal transporter Nramp1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A5A7URA97.61e-2998.18Metal transporter Nramp1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A1J3DQ184.19e-2892.59Protein ROOT HAIR DEFECTIVE 3-like protein 1 (Fragment) OS=Noccaea caerulescens ... [more]
A0A0A9CXG36.58e-2890.74GB1/RHD3-type G domain-containing protein OS=Arundo donax OX=35708 PE=3 SV=1[more]
A0A0A9UYH07.79e-2890.74GB1/RHD3-type G domain-containing protein OS=Arundo donax OX=35708 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT3G13870.21.5e-2496.30Root hair defective 3 GTP-binding protein (RHD3) [more]
AT3G13870.11.5e-2496.30Root hair defective 3 GTP-binding protein (RHD3) [more]
AT1G72960.15.5e-2492.59Root hair defective 3 GTP-binding protein (RHD3) [more]
AT5G45160.19.8e-2183.33Root hair defective 3 GTP-binding protein (RHD3) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008803RHD3/Sey1PFAMPF05879RHD3coord: 55..108
e-value: 1.7E-24
score: 86.1
IPR008803RHD3/Sey1PANTHERPTHR45923PROTEIN SEY1coord: 55..108
NoneNo IPR availablePANTHERPTHR45923:SF15PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOGcoord: 55..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032773.jh1.t1MELO3C032773.jh1.t1mRNA