MELO3C032757 (gene) Melon (DHL92) v4

Overview


Name	MELO3C032757
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein Ycf2-like
Location	chr08: 26633309 .. 26633733 (-)
RNA-Seq Expression	MELO3C032757
Synteny	MELO3C032757

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAAGGGGAAGGGAGATGTCAAAGCAAGAACAAGTGATCAGTTAAAAGCCACGGGGATCACTGGTTCTAGAAAATCATTGGCAACTAGAATTCAAAATCTGTCGAGTACTTCTAAGGAGGTACAAATGCATGTTTTTTGAAATTATACACGAGTTCTCGATGTTTATAGGTTTTTCTATGCATATCAGAGAACAGAAAATATAATGGGAGAAGGCTCCGGGAGCAAGTGGGAGAGTCCAGAAACTTCAAAAAAGAGGGTGAGGACTGAAACGAAAAAAGATGAGGTCAATGTCCAGAAGAAACAAAAGATTAAAAGTTTGGTAAAGTGTAGATTTATTCTCCAATGACTTGTGGTCTGTTAGGTTTAAAAAAAGCTTTTATTTATATTGTTCCGTGTTTAGGTTTTGAGGAGGTGAGTTTA

mRNA sequence

ATGAAAAAGGGGAAGGGAGATGTCAAAGCAAGAACAAGTGATCAGTTAAAAGCCACGGGGATCACTGGTTCTAGAAAATCATTGGCAACTAGAATTCAAAATCTGTCGAGTACTTCTAAGGAGAGAACAGAAAATATAATGGGAGAAGGCTCCGGGAGCAAGTGGGAGAGTCCAGAAACTTCAAAAAAGAGGGTGAGGACTGAAACGAAAAAAGATGAGGTCAATGTCCAGAAGAAACAAAAGATTAAAAGTTTGGTTTTGAGGAGGTGAGTTTA

Coding sequence (CDS)

ATGAAAAAGGGGAAGGGAGATGTCAAAGCAAGAACAAGTGATCAGTTAAAAGCCACGGGGATCACTGGTTCTAGAAAATCATTGGCAACTAGAATTCAAAATCTGTCGAGTACTTCTAAGGAGAGAACAGAAAATATAATGGGAGAAGGCTCCGGGAGCAAGTGGGAGAGTCCAGAAACTTCAAAAAAGAGGGTGAGGACTGAAACGAAAAAAGATGAGGTCAATGTCCAGAAGAAACAAAAGATTAAAAGTTTGGTTTTGAGGAGGTGA

Protein sequence

MKKGKGDVKARTSDQLKATGITGSRKSLATRIQNLSSTSKERTENIMGEGSGSKWESPETSKKRVRTETKKDEVNVQKKQKIKSLVLRR

Homology

[Close]

BLAST of MELO3C032757 vs. NCBI nr
Match: TYK28605.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 119.0 bits (297), Expect = 2.1e-23
Identity = 68/89 (76.40%), Postives = 78/89 (87.64%), Query Frame = 0


Query: 1  MKKGKGDVKARTSDQLKATGITGSRKSLATRIQNLSSTSKERTENIMGEGSGSKWESPET 60
          MKKGKG++K RTSD+L+A GITGSRKSLAT IQNL S+S+ERTE+IM EGSG K ESP T
Sbjct: 1  MKKGKGEIKTRTSDRLRAAGITGSRKSLATGIQNLLSSSEERTEDIMAEGSGGKRESPGT 60

Query: 61 SKKRVRTETKKDEVNVQKKQKIKSLVLRR 90
          SKKRVRTETKK+E  VQKKQ+IKSLV R+
Sbjct: 61 SKKRVRTETKKEEATVQKKQQIKSLVSRK 89

[Close]

BLAST of MELO3C032757 vs. NCBI nr
Match: TYK26024.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 118.6 bits (296), Expect = 2.7e-23
Identity = 67/89 (75.28%), Postives = 78/89 (87.64%), Query Frame = 0


Query: 1  MKKGKGDVKARTSDQLKATGITGSRKSLATRIQNLSSTSKERTENIMGEGSGSKWESPET 60
          MKKG+G++K RTSD+L+A GITGSRKSL T IQNLSS+S+ERTE+IM EGSG K ESP T
Sbjct: 1  MKKGRGEIKTRTSDRLRAAGITGSRKSLPTGIQNLSSSSEERTEDIMAEGSGGKRESPGT 60

Query: 61 SKKRVRTETKKDEVNVQKKQKIKSLVLRR 90
          SKKRVRTETKK+E  VQKKQ+IKSLV R+
Sbjct: 61 SKKRVRTETKKEEATVQKKQRIKSLVSRK 89

[Close]

BLAST of MELO3C032757 vs. NCBI nr
Match: KAA0064135.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 118.2 bits (295), Expect = 3.5e-23
Identity = 68/89 (76.40%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 1  MKKGKGDVKARTSDQLKATGITGSRKSLATRIQNLSSTSKERTENIMGEGSGSKWESPET 60
          MKKGKG++K RTSD+L+A GITGSRKSLAT IQNL S+S+ERTE+IM EGSG K ESP T
Sbjct: 1  MKKGKGEIKTRTSDRLRAAGITGSRKSLATGIQNLLSSSEERTEDIMAEGSGGKRESPGT 60

Query: 61 SKKRVRTETKKDEVNVQKKQKIKSLVLRR 90
          SKKRVRTETKK+E  VQKKQ+IKSLV  R
Sbjct: 61 SKKRVRTETKKEEATVQKKQRIKSLVKSR 89

[Close]

BLAST of MELO3C032757 vs. NCBI nr
Match: KAA0067175.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 117.5 bits (293), Expect = 6.0e-23
Identity = 67/89 (75.28%), Postives = 78/89 (87.64%), Query Frame = 0


Query: 1  MKKGKGDVKARTSDQLKATGITGSRKSLATRIQNLSSTSKERTENIMGEGSGSKWESPET 60
          MKKG+G++K RTSD+L+A GITGSRKSL T IQNLSS+S+ERTE+IM EGSG K ESP T
Sbjct: 1  MKKGRGEIKTRTSDRLRAAGITGSRKSLPTGIQNLSSSSEERTEDIMAEGSGGKRESPGT 60

Query: 61 SKKRVRTETKKDEVNVQKKQKIKSLVLRR 90
          SKKRVRTETKK+E  VQKKQ+IKSLV R+
Sbjct: 61 SKKRVRTETKKEEDTVQKKQRIKSLVSRK 89

[Close]

BLAST of MELO3C032757 vs. NCBI nr
Match: TYK22588.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 117.5 bits (293), Expect = 6.0e-23
Identity = 66/89 (74.16%), Postives = 78/89 (87.64%), Query Frame = 0


Query: 1  MKKGKGDVKARTSDQLKATGITGSRKSLATRIQNLSSTSKERTENIMGEGSGSKWESPET 60
          MK+G+G++K RTSD+L+A GITGSRKSL T IQNLSS+S+ERTE+IM EGSG K ESP T
Sbjct: 1  MKRGRGEIKTRTSDRLRAAGITGSRKSLPTGIQNLSSSSEERTEDIMAEGSGGKRESPGT 60

Query: 61 SKKRVRTETKKDEVNVQKKQKIKSLVLRR 90
          SKKRVRTETKK+E  VQKKQ+IKSLV R+
Sbjct: 61 SKKRVRTETKKEEATVQKKQRIKSLVSRK 89

[Close]

BLAST of MELO3C032757 vs. ExPASy TrEMBL
Match: A0A5D3DZ37 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00170 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.0e-23
Identity = 68/89 (76.40%), Postives = 78/89 (87.64%), Query Frame = 0


Query: 1  MKKGKGDVKARTSDQLKATGITGSRKSLATRIQNLSSTSKERTENIMGEGSGSKWESPET 60
          MKKGKG++K RTSD+L+A GITGSRKSLAT IQNL S+S+ERTE+IM EGSG K ESP T
Sbjct: 1  MKKGKGEIKTRTSDRLRAAGITGSRKSLATGIQNLLSSSEERTEDIMAEGSGGKRESPGT 60

Query: 61 SKKRVRTETKKDEVNVQKKQKIKSLVLRR 90
          SKKRVRTETKK+E  VQKKQ+IKSLV R+
Sbjct: 61 SKKRVRTETKKEEATVQKKQQIKSLVSRK 89

[Close]

BLAST of MELO3C032757 vs. ExPASy TrEMBL
Match: A0A5D3DR12 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00300 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-23
Identity = 67/89 (75.28%), Postives = 78/89 (87.64%), Query Frame = 0


Query: 1  MKKGKGDVKARTSDQLKATGITGSRKSLATRIQNLSSTSKERTENIMGEGSGSKWESPET 60
          MKKG+G++K RTSD+L+A GITGSRKSL T IQNLSS+S+ERTE+IM EGSG K ESP T
Sbjct: 1  MKKGRGEIKTRTSDRLRAAGITGSRKSLPTGIQNLSSSSEERTEDIMAEGSGGKRESPGT 60

Query: 61 SKKRVRTETKKDEVNVQKKQKIKSLVLRR 90
          SKKRVRTETKK+E  VQKKQ+IKSLV R+
Sbjct: 61 SKKRVRTETKKEEATVQKKQRIKSLVSRK 89

[Close]

BLAST of MELO3C032757 vs. ExPASy TrEMBL
Match: A0A5A7VE08 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00540 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.7e-23
Identity = 68/89 (76.40%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 1  MKKGKGDVKARTSDQLKATGITGSRKSLATRIQNLSSTSKERTENIMGEGSGSKWESPET 60
          MKKGKG++K RTSD+L+A GITGSRKSLAT IQNL S+S+ERTE+IM EGSG K ESP T
Sbjct: 1  MKKGKGEIKTRTSDRLRAAGITGSRKSLATGIQNLLSSSEERTEDIMAEGSGGKRESPGT 60

Query: 61 SKKRVRTETKKDEVNVQKKQKIKSLVLRR 90
          SKKRVRTETKK+E  VQKKQ+IKSLV  R
Sbjct: 61 SKKRVRTETKKEEATVQKKQRIKSLVKSR 89

[Close]

BLAST of MELO3C032757 vs. ExPASy TrEMBL
Match: A0A5D3DGJ6 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00050 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.9e-23
Identity = 66/89 (74.16%), Postives = 78/89 (87.64%), Query Frame = 0


Query: 1  MKKGKGDVKARTSDQLKATGITGSRKSLATRIQNLSSTSKERTENIMGEGSGSKWESPET 60
          MK+G+G++K RTSD+L+A GITGSRKSL T IQNLSS+S+ERTE+IM EGSG K ESP T
Sbjct: 1  MKRGRGEIKTRTSDRLRAAGITGSRKSLPTGIQNLSSSSEERTEDIMAEGSGGKRESPGT 60

Query: 61 SKKRVRTETKKDEVNVQKKQKIKSLVLRR 90
          SKKRVRTETKK+E  VQKKQ+IKSLV R+
Sbjct: 61 SKKRVRTETKKEEATVQKKQRIKSLVSRK 89

[Close]

BLAST of MELO3C032757 vs. ExPASy TrEMBL
Match: A0A5A7VN68 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G002520 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.9e-23
Identity = 67/89 (75.28%), Postives = 78/89 (87.64%), Query Frame = 0


Query: 1  MKKGKGDVKARTSDQLKATGITGSRKSLATRIQNLSSTSKERTENIMGEGSGSKWESPET 60
          MKKG+G++K RTSD+L+A GITGSRKSL T IQNLSS+S+ERTE+IM EGSG K ESP T
Sbjct: 1  MKKGRGEIKTRTSDRLRAAGITGSRKSLPTGIQNLSSSSEERTEDIMAEGSGGKRESPGT 60

Query: 61 SKKRVRTETKKDEVNVQKKQKIKSLVLRR 90
          SKKRVRTETKK+E  VQKKQ+IKSLV R+
Sbjct: 61 SKKRVRTETKKEEDTVQKKQRIKSLVSRK 89

The following BLAST results are available for this feature:

BLAST of MELO3C032757 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28605.1	2.1e-23	76.40	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
TYK26024.1	2.7e-23	75.28	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
KAA0064135.1	3.5e-23	76.40	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
KAA0067175.1	6.0e-23	75.28	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
TYK22588.1	6.0e-23	74.16	protein Ycf2-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C032757 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032757 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DZ37	1.0e-23	76.40	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G0...	[more]
A0A5D3DR12	1.3e-23	75.28	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G0...	[more]
A0A5A7VE08	1.7e-23	76.40	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00...	[more]
A0A5D3DGJ6	2.9e-23	74.16	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00...	[more]
A0A5A7VN68	2.9e-23	75.28	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G002...	[more]

BLAST of MELO3C032757 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032757.1	MELO3C032757.1	mRNA