MELO3C032756.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C032756.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Protein Ycf2-like
Location	chr07: 17254197 .. 17258112 (-)
RNA-Seq Expression	MELO3C032756.jh1
Synteny	MELO3C032756.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATATTTCGCTGAATAGAGGCATGTCCTCTACAAGTGGGATTGATGTACTGACGAAAATGGTAGAGAAGATTGAGAATAGACAAAAAAGGATGGAGACAGTGTGGAAGGTATTCTTGAGTTTCTTAAATCTGTAGAATTGAAAATGAATAACCGGTTTGAAGAACTAGGCAGAAGATGAATGGAATAATAGAAGCAATAAGGAGTCAACAATGTAGTTCTTCGGGTGGCCAATACACCCATAAATTTATGGTAAGCATATTGGTAGACTTTAATAATCTGTATGCATGAATCTAAATCTTAACAAATACAGTGTATCTGGTTTGTATTTGTTGCATAGAGAGCAAGGGCGTTTGAAGAGCACCTTGACAAGGTGGAGGAGGACCAAGAAGAAGATGATGTTGAAGATTTGAACTTGGATTCAAGCAATCCAACGGTGCTTGGAAAAAGGGATGACAACGAAGACAAAGACGGAAAAAGGATTATGGATGAAAGTCGATCAGAAAGTTTGAGAGGACAAGATGGTGGTCAATCTAAAGTGGCAAAATCAGAGACACCACCAACAGTCGGAGATAAAGATTATTTGCCGTATAAGGTAAATAAAAAAATGAAACTGTTGAAGATGTGTATAATACATATTATAGACTAATATATTTATATACTTGTAATAGGCCACGGAGGAAACAGATGAGGAGATAAACAGGGTGATATGGTCAATCGATGAAAGTGTTATATATGACGAGATCAAGAAGAAAGAACACAGGAGAAGAACGGTATAGTTGTGGATGTGTGTATGTTTATCATACTAAGTGACTATTAGTTTAATGACTATAATATAAATTATATTGAATTTGTACCTTTAACTGTGGTAGTAGGCTGACCATATTAGGAAGTGTGTGGCAATCGATGATATGAAAGTTTTTTTGGATCTACAAGTTGCTACTGTTTTTTGTAATGAATTATGGTAATTACATAGTATATGTTGATTACAGTGTTATTCTGGGTAATTGTCATTATGAATATAATTGAATGGGTTGCTATAAGACATGTATCATTGAATATCATTTATCATTATGAAGATAATTGAATGGGTTATTGTGAGACATTTATCATTATGAATATCAGTTAATGAATGGATATGTATGATATTGAATGAATGTATGGCTATTGTATTTAAACAATTCAGATAACAATTAGAGTGTATCTGAAATGTGGCCTATAAGAATGTGATGGTTGTAAGTGTAGTTTGACTACCTATTCCTTAGAAAAATGTGAATTGTTGTATATGAATGGTATCTTTAACTAATACCTGAGAAATATTAAAGAATGCACAGGGTCAATGTTCATTGAATTCAACCCCAAGAATGTTGAGGAATGTGCAACCAACATTTGGCAAAATTAAAGATAGACCACAGATGGCCAAGGTGATAACATATCTAGTATGAATCTGGGTTCAACATTTCGAAAATGGTAATAACATACTAATATAGAATCTTGTTTGCCAATAACCTGTAGATTATAGGGAAAATGTCGAATAATGATAGGCTTTCAAATATGAAGGAAAATAGACCAACAGCGAGGGTTATTCTAAAACATGTAAGCATATGTCATAATTTATACGTAATTTATAACTTGTTATCCTATTAATGGACTTCCTTTTTTTTTTTAGCTGAACACCACAAAAGGAAGGATTGGGAATGAAAAGTTCAAATGCTAAAGAGTATAGAGAGGTTACACCAGCTTCAACGGGAATATGGATAGATGCTTTAAGAGGAAAAGTAGTTCCACCAAGGAAGAATAAAGAGAATTCATTCTCAGAATGGCCATCGTTTGATCTGCATCTAAGTCAAGCTTGATATATTCATTTTAAGCTTTTTTGTTAGGGGTCTAGAATATATTGGAATATTCATTGTTTTATTGGATTACTTACATTAAATCTATAAAGATATACAAAACTTATTAATTCATGCTTATTTGATCATTATTAAGTAAGTTGAAATACATTGGATTTTGAAGATAACTATAAATGAATTTAAAACAGGTCAATACAATGTAATGTATTTAGTCAACATACCTGAGTCGTCAACATTCTAAGAAATACTTTGTATTTAAATGAACAAAAGACCAATCTTATTTGAACGAATCATTCAACCCACTTGATAACAAAATACAACTATGAATATAGACAATTAAAAAGGAAATATAAACTAATTAGAACTTTAAGTTATTAAACATGGAAATTACTAAATGGGTTCTTTATAAGACCTACAATTATGACCTTTTTTTACCACACTTGCTGCAATGAACAGTGGCTTTTTTATCTAAAAATGAAGTAAACCTCTTCTTTTTTGGTCTTCCAGCTGGACGTTTAACCTGTAGTGGAAGTATTCTATCATTGCGACCTTGGTGCGTATTCCTAATTTGGTTTGCACTACCAATAGGACGCATTCCCTTCTTGTACAGGTTTATCAAATTTGAGACATAGTAGAACTTATCAGTGTACAAATGGAGATTAAGATTCCTTGTGGACAATGCTATACATGCATGTGAACAAGGGATCAAATCAAGGCCCCATTGACGACATGAGCATGTCCGATTTAAAATGTTGACAACAAATTGTTCCTTACGATGGCGGACTTCAAATTCATGTTGGTCTACAGGATATATCTGTCAAAACAGTACAAAAAAAATCATTTACAAACAAGTGAATACATATTTATTGCATTTATAGAATATTAAATAACTTACATTCATTGAGCGACTTTCCCCTAAAGATTCTCGAATCATATCTTCTACATATATTGAAAGTTCTGTGCGTTGGAAACTCCATTTGGTATGATGTTCGTAGAACCATTTTTGAACCAAACTACGAATTGATTCTAGAAGTCCAATTACAGGCAATTCTCATTGTTCTTTCAAGGTAGAATTCATACTTTCAGAGATGTTGGTGGTAATAACCTGGTATCTTTTTCTTCTAAAAAATGCCCTAGTCCACCTGTGTCTTCCCATTGCTTCCAACTCATGCCTCATTGATGGAGATAGTTGTTCGAGTTGCCTCATGTAGTACTCAAATTCCAGTGGTGTTTAAGCTCTGGCACATTTATTGAATGAGTCCTCCATGGGAAGTGATTTATGGTTCTTTTTCAAGTTCTTCAACAAATGGAATTCACATAATCCATGTTCAGCTATTTCATAAACGACATTAAACTCATTTTCTATACTTTTGTAAGCATCAGACACAATTACCATTTTATTATGTTCCCCAAAAATGGCCTTAAGGTTTCGAAAAAACCATGCCCATGAAAAATCATTCTCTGAATCAACGACAGCAAAAGCTAGTGGCACAATTTGAGAATTTCCATCAATAGTACAAGCAGAGATGTGGGTACCAAGATATTTATTCTTCATGGCTGGACCATCAACGAAAATAACTGGTACGCAGTAGTTCCATGCATCAATTGAAGCAGCTAGTGCCATGAAATAGAATTTAAACCGACCTTCATCATCTGCTTCTTCAGTCGTATATGTACCTAAAAACAGTCAAATAAAGTAATTTTTAGAATTACATTATATTTCTAGATTGATCGTGTGGTACTTGCTAAAATACAGAGTTTTTGCCATTTTTATACCTGGGTTGTTTCTGATCAATACATCTGAAAAAGTAGACAGCATGGCATACGAGTCCTTCGGAGTACCTCTAATGGAATTCAAAGCAATTTCACGTCCTCTCCAAGCTTTATCATAGCTTACGTTCACTCCGTGGTGAATCTTCATAATTTATAACATCCGAAGGATGACATAGAGCCTTGTCATTCATTTTAAATATTAATTTCGTACACTCAGATGCAATCCAGGATGTTGCTTGTTTGTGATCATTCTTCACGACGTCAACAGAACACTGATGTGTATCCGTAA

mRNA sequence

ATGCATATTTCGCTGAATAGAGGCATGTCCTCTACAAGTGGGATTGATGTACTGACGAAAATGGTAGAGAAGATTGAGAATAGACAAAAAAGGATGGAGACAGTGTGGAAGAGAGCAAGGGCGTTTGAAGAGCACCTTGACAAGGTGGAGGAGGACCAAGAAGAAGATGATGTTGAAGATTTGAACTTGGATTCAAGCAATCCAACGGTGCTTGGAAAAAGGGATGACAACGAAGACAAAGACGGAAAAAGGATTATGGATGAAAGTCGATCAGAAAGTTTGAGAGGACAAGATGGTGGTCAATCTAAAGTGGCAAAATCAGAGACACCACCAACAGTCGGAGATAAAGATTATTTGCCGTATAAGGCCACGGAGGAAACAGATGAGGAGATAAACAGGGTGATATGGTCAATCGATGAAAGTGTTATATATGACGAGATCAAGAAGAAAGAACACAGGAGAAGAACGATGCAATCCAGGATGTTGCTTGTTTGTGATCATTCTTCACGACGTCAACAGAACACTGATGTGTATCCGTAA

Coding sequence (CDS)

ATGCATATTTCGCTGAATAGAGGCATGTCCTCTACAAGTGGGATTGATGTACTGACGAAAATGGTAGAGAAGATTGAGAATAGACAAAAAAGGATGGAGACAGTGTGGAAGAGAGCAAGGGCGTTTGAAGAGCACCTTGACAAGGTGGAGGAGGACCAAGAAGAAGATGATGTTGAAGATTTGAACTTGGATTCAAGCAATCCAACGGTGCTTGGAAAAAGGGATGACAACGAAGACAAAGACGGAAAAAGGATTATGGATGAAAGTCGATCAGAAAGTTTGAGAGGACAAGATGGTGGTCAATCTAAAGTGGCAAAATCAGAGACACCACCAACAGTCGGAGATAAAGATTATTTGCCGTATAAGGCCACGGAGGAAACAGATGAGGAGATAAACAGGGTGATATGGTCAATCGATGAAAGTGTTATATATGACGAGATCAAGAAGAAAGAACACAGGAGAAGAACGATGCAATCCAGGATGTTGCTTGTTTGTGATCATTCTTCACGACGTCAACAGAACACTGATGTGTATCCGTAA

Protein sequence

MHISLNRGMSSTSGIDVLTKMVEKIENRQKRMETVWKRARAFEEHLDKVEEDQEEDDVEDLNLDSSNPTVLGKRDDNEDKDGKRIMDESRSESLRGQDGGQSKVAKSETPPTVGDKDYLPYKATEETDEEINRVIWSIDESVIYDEIKKKEHRRRTMQSRMLLVCDHSSRRQQNTDVYP

Homology

[Close]

BLAST of MELO3C032756.jh1 vs. NCBI nr
Match: KAA0056668.1 (protein Ycf2-like [Cucumis melo var. makuwa] >TYK04627.1 protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 281 bits (718), Expect = 7.66e-93
Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 9   MSSTSGIDVLTKMVEKIENRQKRMETVWKRARAFEEHLDKVEEDQEEDDVEDLNLDSSNP 68
           MSSTSGIDVLTKMVEKIENRQKRMETVWKRARAFEEHLDKVEEDQEEDDVEDLNLDSSNP
Sbjct: 1   MSSTSGIDVLTKMVEKIENRQKRMETVWKRARAFEEHLDKVEEDQEEDDVEDLNLDSSNP 60

Query: 69  TVLGKRDDNEDKDGKRIMDESRSESLRGQDGGQSKVAKSETPPTVGDKDYLPYKATEETD 128
           TVLGKRDDNEDKDGKRIMDESRSESLRGQDGGQSKVAKSETPPTVGDKDYLPYKATEETD
Sbjct: 61  TVLGKRDDNEDKDGKRIMDESRSESLRGQDGGQSKVAKSETPPTVGDKDYLPYKATEETD 120

Query: 129 EEINRVIWSIDESVIYDEIKKKEHRRRTMQ 158
           EEINRVIWSIDESVIYDEIKKKEHRRRT Q
Sbjct: 121 EEINRVIWSIDESVIYDEIKKKEHRRRTGQ 150

[Close]

BLAST of MELO3C032756.jh1 vs. NCBI nr
Match: TYK19697.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 222 bits (565), Expect = 2.21e-67
Identity = 132/204 (64.71%), Postives = 142/204 (69.61%), Query Frame = 0


Query: 2   HISLNRGMSSTSGIDVLTKMVEKIENRQKRMETV-------------------------- 61
           H+SLNRGM STSGI+VLTKMVEK EN Q+RMET                           
Sbjct: 178 HVSLNRGMPSTSGINVLTKMVEKFENSQQRMETSVEGILEFLKCVELKMNNRFKELGQKM 237

Query: 62  ----------------------WKRARAFEEHLDKVEEDQEEDDVEDLNLDSSNPTVLGK 121
                                 +  ARAFEEHLDKV+EDQEEDDVEDLNLDSSNPTVL K
Sbjct: 238 NGIIEAIRSQQCSSSGGQYTHEFMGARAFEEHLDKVKEDQEEDDVEDLNLDSSNPTVLEK 297

Query: 122 RDDNEDKDGKRIMDESRSESLRGQDGGQSKVAKSETPPTVGDKDYLPYKATEETDEEINR 157
           RDD+EDKDGKR+M ESR+ES RGQDGGQSKVAKSETPPT GDKD   YKATEETDEEINR
Sbjct: 298 RDDDEDKDGKRLMGESRAESSRGQDGGQSKVAKSETPPTAGDKDSSTYKATEETDEEINR 357

[Close]

BLAST of MELO3C032756.jh1 vs. NCBI nr
Match: TYK30962.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 233 bits (595), Expect = 2.47e-67
Identity = 127/157 (80.89%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 2    HISLNRGMSSTSGIDVLTKMVEKIENRQKRMETVWKRARAFEEHLDKVEEDQEEDDVEDL 61
            H+ LNRGM STSGI VLTKMVEKIEN QK MET  + ARAF+EHLDKVEEDQEEDDVEDL
Sbjct: 1195 HVLLNRGMPSTSGIGVLTKMVEKIENSQKTMETSVEGARAFKEHLDKVEEDQEEDDVEDL 1254

Query: 62   NLDSSNPTVLGKRDDNEDKDGKRIMDESRSESLRGQDGGQSKVAKSETPPTVGDKDYLPY 121
            NLDSS PTVLGKRDD+E+KDGKR+MDESR+ES RGQDGGQSK+ KSETPP   DK+  PY
Sbjct: 1255 NLDSSKPTVLGKRDDDENKDGKRLMDESRAESSRGQDGGQSKITKSETPPIAEDKNSSPY 1314

Query: 122  KATEETDEEINRVIWSIDESVIYDEIKKKEHRRRTMQ 158
            KATEETD+EINR+I S DESVIYDEIKKKEHRRRT Q
Sbjct: 1315 KATEETDKEINRLIQSTDESVIYDEIKKKEHRRRTGQ 1351

[Close]

BLAST of MELO3C032756.jh1 vs. NCBI nr
Match: KAA0035574.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 233 bits (595), Expect = 2.53e-67
Identity = 127/157 (80.89%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 2    HISLNRGMSSTSGIDVLTKMVEKIENRQKRMETVWKRARAFEEHLDKVEEDQEEDDVEDL 61
            H+ LNRGM STSGI VLTKMVEKIEN QK MET  + ARAF+EHLDKVEEDQEEDDVEDL
Sbjct: 1592 HVLLNRGMPSTSGIGVLTKMVEKIENSQKTMETSVEGARAFKEHLDKVEEDQEEDDVEDL 1651

Query: 62   NLDSSNPTVLGKRDDNEDKDGKRIMDESRSESLRGQDGGQSKVAKSETPPTVGDKDYLPY 121
            NLDSS PTVLGKRDD+E+KDGKR+MDESR+ES RGQDGGQSK+ KSETPP   DK+  PY
Sbjct: 1652 NLDSSKPTVLGKRDDDENKDGKRLMDESRAESSRGQDGGQSKITKSETPPIAEDKNSSPY 1711

Query: 122  KATEETDEEINRVIWSIDESVIYDEIKKKEHRRRTMQ 158
            KATEETD+EINR+I S DESVIYDEIKKKEHRRRT Q
Sbjct: 1712 KATEETDKEINRLIQSTDESVIYDEIKKKEHRRRTGQ 1748

[Close]

BLAST of MELO3C032756.jh1 vs. NCBI nr
Match: KAA0054156.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 214 bits (546), Expect = 6.56e-66
Identity = 128/199 (64.32%), Postives = 138/199 (69.35%), Query Frame = 0


Query: 7   RGMSSTSGIDVLTKMVEKIENRQKRMETV------------------------------- 66
           RG+ STSGIDVLTKMVEKIEN Q+RMET                                
Sbjct: 126 RGIPSTSGIDVLTKMVEKIENSQRRMETSVEGILEFLKSVELKMNNRFEKLGQKMNGIIE 185

Query: 67  -----------------WKRARAFEEHLDKVEEDQEEDDVEDLNLDSSNPTVLGKRDDNE 126
                            +  ARAFEEHLDKVEEDQEEDDVEDL LDSSNPTVLGKRDD+E
Sbjct: 186 AIRSQQCSSLGGQYTHEFMGARAFEEHLDKVEEDQEEDDVEDLKLDSSNPTVLGKRDDDE 245

Query: 127 DKDGKRIMDESRSESLRGQDGGQSKVAKSETPPTVGDKDYLPYKATEETDEEINRVIWSI 157
           DKDGK ++DESR ES +GQDGGQSK+AKSETPPT GDKD  PYKATEETDEEINR+I SI
Sbjct: 246 DKDGKGLIDESRPESSKGQDGGQSKMAKSETPPTAGDKDSSPYKATEETDEEINRLIRSI 305

[Close]

BLAST of MELO3C032756.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UNK0 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold351G00340 PE=4 SV=1)

HSP 1 Score: 281 bits (718), Expect = 3.71e-93
Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 9   MSSTSGIDVLTKMVEKIENRQKRMETVWKRARAFEEHLDKVEEDQEEDDVEDLNLDSSNP 68
           MSSTSGIDVLTKMVEKIENRQKRMETVWKRARAFEEHLDKVEEDQEEDDVEDLNLDSSNP
Sbjct: 1   MSSTSGIDVLTKMVEKIENRQKRMETVWKRARAFEEHLDKVEEDQEEDDVEDLNLDSSNP 60

Query: 69  TVLGKRDDNEDKDGKRIMDESRSESLRGQDGGQSKVAKSETPPTVGDKDYLPYKATEETD 128
           TVLGKRDDNEDKDGKRIMDESRSESLRGQDGGQSKVAKSETPPTVGDKDYLPYKATEETD
Sbjct: 61  TVLGKRDDNEDKDGKRIMDESRSESLRGQDGGQSKVAKSETPPTVGDKDYLPYKATEETD 120

Query: 129 EEINRVIWSIDESVIYDEIKKKEHRRRTMQ 158
           EEINRVIWSIDESVIYDEIKKKEHRRRT Q
Sbjct: 121 EEINRVIWSIDESVIYDEIKKKEHRRRTGQ 150

[Close]

BLAST of MELO3C032756.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D818 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00980 PE=4 SV=1)

HSP 1 Score: 222 bits (565), Expect = 1.07e-67
Identity = 132/204 (64.71%), Postives = 142/204 (69.61%), Query Frame = 0


Query: 2   HISLNRGMSSTSGIDVLTKMVEKIENRQKRMETV-------------------------- 61
           H+SLNRGM STSGI+VLTKMVEK EN Q+RMET                           
Sbjct: 178 HVSLNRGMPSTSGINVLTKMVEKFENSQQRMETSVEGILEFLKCVELKMNNRFKELGQKM 237

Query: 62  ----------------------WKRARAFEEHLDKVEEDQEEDDVEDLNLDSSNPTVLGK 121
                                 +  ARAFEEHLDKV+EDQEEDDVEDLNLDSSNPTVL K
Sbjct: 238 NGIIEAIRSQQCSSSGGQYTHEFMGARAFEEHLDKVKEDQEEDDVEDLNLDSSNPTVLEK 297

Query: 122 RDDNEDKDGKRIMDESRSESLRGQDGGQSKVAKSETPPTVGDKDYLPYKATEETDEEINR 157
           RDD+EDKDGKR+M ESR+ES RGQDGGQSKVAKSETPPT GDKD   YKATEETDEEINR
Sbjct: 298 RDDDEDKDGKRLMGESRAESSRGQDGGQSKVAKSETPPTAGDKDSSTYKATEETDEEINR 357

[Close]

BLAST of MELO3C032756.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E4V0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001880 PE=4 SV=1)

HSP 1 Score: 233 bits (595), Expect = 1.20e-67
Identity = 127/157 (80.89%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 2    HISLNRGMSSTSGIDVLTKMVEKIENRQKRMETVWKRARAFEEHLDKVEEDQEEDDVEDL 61
            H+ LNRGM STSGI VLTKMVEKIEN QK MET  + ARAF+EHLDKVEEDQEEDDVEDL
Sbjct: 1195 HVLLNRGMPSTSGIGVLTKMVEKIENSQKTMETSVEGARAFKEHLDKVEEDQEEDDVEDL 1254

Query: 62   NLDSSNPTVLGKRDDNEDKDGKRIMDESRSESLRGQDGGQSKVAKSETPPTVGDKDYLPY 121
            NLDSS PTVLGKRDD+E+KDGKR+MDESR+ES RGQDGGQSK+ KSETPP   DK+  PY
Sbjct: 1255 NLDSSKPTVLGKRDDDENKDGKRLMDESRAESSRGQDGGQSKITKSETPPIAEDKNSSPY 1314

Query: 122  KATEETDEEINRVIWSIDESVIYDEIKKKEHRRRTMQ 158
            KATEETD+EINR+I S DESVIYDEIKKKEHRRRT Q
Sbjct: 1315 KATEETDKEINRLIQSTDESVIYDEIKKKEHRRRTGQ 1351

[Close]

BLAST of MELO3C032756.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SW90 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G002460 PE=4 SV=1)

HSP 1 Score: 233 bits (595), Expect = 1.22e-67
Identity = 127/157 (80.89%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 2    HISLNRGMSSTSGIDVLTKMVEKIENRQKRMETVWKRARAFEEHLDKVEEDQEEDDVEDL 61
            H+ LNRGM STSGI VLTKMVEKIEN QK MET  + ARAF+EHLDKVEEDQEEDDVEDL
Sbjct: 1592 HVLLNRGMPSTSGIGVLTKMVEKIENSQKTMETSVEGARAFKEHLDKVEEDQEEDDVEDL 1651

Query: 62   NLDSSNPTVLGKRDDNEDKDGKRIMDESRSESLRGQDGGQSKVAKSETPPTVGDKDYLPY 121
            NLDSS PTVLGKRDD+E+KDGKR+MDESR+ES RGQDGGQSK+ KSETPP   DK+  PY
Sbjct: 1652 NLDSSKPTVLGKRDDDENKDGKRLMDESRAESSRGQDGGQSKITKSETPPIAEDKNSSPY 1711

Query: 122  KATEETDEEINRVIWSIDESVIYDEIKKKEHRRRTMQ 158
            KATEETD+EINR+I S DESVIYDEIKKKEHRRRT Q
Sbjct: 1712 KATEETDKEINRLIQSTDESVIYDEIKKKEHRRRTGQ 1748

[Close]

BLAST of MELO3C032756.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UIQ5 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00800 PE=4 SV=1)

HSP 1 Score: 214 bits (546), Expect = 3.18e-66
Identity = 128/199 (64.32%), Postives = 138/199 (69.35%), Query Frame = 0


Query: 7   RGMSSTSGIDVLTKMVEKIENRQKRMETV------------------------------- 66
           RG+ STSGIDVLTKMVEKIEN Q+RMET                                
Sbjct: 126 RGIPSTSGIDVLTKMVEKIENSQRRMETSVEGILEFLKSVELKMNNRFEKLGQKMNGIIE 185

Query: 67  -----------------WKRARAFEEHLDKVEEDQEEDDVEDLNLDSSNPTVLGKRDDNE 126
                            +  ARAFEEHLDKVEEDQEEDDVEDL LDSSNPTVLGKRDD+E
Sbjct: 186 AIRSQQCSSLGGQYTHEFMGARAFEEHLDKVEEDQEEDDVEDLKLDSSNPTVLGKRDDDE 245

Query: 127 DKDGKRIMDESRSESLRGQDGGQSKVAKSETPPTVGDKDYLPYKATEETDEEINRVIWSI 157
           DKDGK ++DESR ES +GQDGGQSK+AKSETPPT GDKD  PYKATEETDEEINR+I SI
Sbjct: 246 DKDGKGLIDESRPESSKGQDGGQSKMAKSETPPTAGDKDSSPYKATEETDEEINRLIRSI 305

The following BLAST results are available for this feature:

BLAST of MELO3C032756.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056668.1	7.66e-93	99.33	protein Ycf2-like [Cucumis melo var. makuwa] >TYK04627.1 protein Ycf2-like [Cucu...	[more]
TYK19697.1	2.21e-67	64.71	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
TYK30962.1	2.47e-67	80.89	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0035574.1	2.53e-67	80.89	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0054156.1	6.56e-66	64.32	protein Ycf2-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C032756.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032756.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UNK0	3.71e-93	99.33	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold351G00...	[more]
A0A5D3D818	1.07e-67	64.71	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00...	[more]
A0A5D3E4V0	1.20e-67	80.89	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7SW90	1.22e-67	80.89	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold28...	[more]
A0A5A7UIQ5	3.18e-66	64.32	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00...	[more]

BLAST of MELO3C032756.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032756.jh1.t1	MELO3C032756.jh1.t1	mRNA