MELO3C032744.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C032744.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr07: 15877664 .. 15877882 (-)
RNA-Seq ExpressionMELO3C032744.jh1
SyntenyMELO3C032744.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGATAAGTCGATCCTTCACAGGTTGTTTGTAATCTTGGCTGGGTCAAAATATTGTTTTACCCCCGATATTACATCTTGTTCCTTAAGACCCACTGATCTACTATTGAACAATTGGTTTAAGGTCCAGCTTTTAAACCTGAATCTTTCTCGGACCAATGAGAAGGTGGGACCCCTTGTTCAAGACTTGAATTCAGTCCTTAAGGGAACAACCTAA

mRNA sequence

ATGATGGATAAGTCGATCCTTCACAGGTTGTTTGTAATCTTGGCTGGGTCAAAATATTGTTTTACCCCCGATATTACATCTTGTTCCTTAAGACCCACTGATCTACTATTGAACAATTGGTTTAAGGTCCAGCTTTTAAACCTGAATCTTTCTCGGACCAATGAGAAGGTGGGACCCCTTGTTCAAGACTTGAATTCAGTCCTTAAGGGAACAACCTAA

Coding sequence (CDS)

ATGATGGATAAGTCGATCCTTCACAGGTTGTTTGTAATCTTGGCTGGGTCAAAATATTGTTTTACCCCCGATATTACATCTTGTTCCTTAAGACCCACTGATCTACTATTGAACAATTGGTTTAAGGTCCAGCTTTTAAACCTGAATCTTTCTCGGACCAATGAGAAGGTGGGACCCCTTGTTCAAGACTTGAATTCAGTCCTTAAGGGAACAACCTAA

Protein sequence

MMDKSILHRLFVILAGSKYCFTPDITSCSLRPTDLLLNNWFKVQLLNLNLSRTNEKVGPLVQDLNSVLKGTT
Homology
BLAST of MELO3C032744.jh1 vs. NCBI nr
Match: TYK27229.1 (hypothetical protein E5676_scaffold236G001140 [Cucumis melo var. makuwa])

HSP 1 Score: 129 bits (323), Expect = 1.24e-36
Identity = 63/72 (87.50%), Postives = 66/72 (91.67%), Query Frame = 0

Query: 1  MMDKSILHRLFVILAGSKYCFTPDITSCSLRPTDLLLNNWFKVQLLNLNLSRTNEKVGPL 60
          MM K ILHRLFVILAGSKYCFT +ITSCSLRPTDLLLNNWFKVQ +NLN SR NEKVGPL
Sbjct: 1  MMGKLILHRLFVILAGSKYCFTLEITSCSLRPTDLLLNNWFKVQPINLNPSRANEKVGPL 60

Query: 61 VQDLNSVLKGTT 72
          VQDL+SVLKGTT
Sbjct: 61 VQDLDSVLKGTT 72

BLAST of MELO3C032744.jh1 vs. NCBI nr
Match: KAA0062650.1 (hypothetical protein E6C27_scaffold79G001670 [Cucumis melo var. makuwa])

HSP 1 Score: 127 bits (320), Expect = 3.54e-36
Identity = 62/72 (86.11%), Postives = 66/72 (91.67%), Query Frame = 0

Query: 1  MMDKSILHRLFVILAGSKYCFTPDITSCSLRPTDLLLNNWFKVQLLNLNLSRTNEKVGPL 60
          MM KSILHRLF+ILAGSKY FTP+ITSCSLRPTD LLNNWFKVQ +NLN SR NEKVGPL
Sbjct: 1  MMSKSILHRLFIILAGSKYHFTPEITSCSLRPTDPLLNNWFKVQPINLNPSRANEKVGPL 60

Query: 61 VQDLNSVLKGTT 72
          VQDL+SVLKGTT
Sbjct: 61 VQDLDSVLKGTT 72

BLAST of MELO3C032744.jh1 vs. NCBI nr
Match: TYK01183.1 (hypothetical protein E5676_scaffold2044G00240 [Cucumis melo var. makuwa])

HSP 1 Score: 125 bits (315), Expect = 2.05e-35
Identity = 61/72 (84.72%), Postives = 65/72 (90.28%), Query Frame = 0

Query: 1  MMDKSILHRLFVILAGSKYCFTPDITSCSLRPTDLLLNNWFKVQLLNLNLSRTNEKVGPL 60
          MM KSILHRLF+ILAGSKY FTP+ITSCSLRPTD LLNNWFKVQ +NLN SR NEKVGP 
Sbjct: 1  MMSKSILHRLFIILAGSKYHFTPEITSCSLRPTDPLLNNWFKVQPINLNPSRANEKVGPY 60

Query: 61 VQDLNSVLKGTT 72
          VQDL+SVLKGTT
Sbjct: 61 VQDLDSVLKGTT 72

BLAST of MELO3C032744.jh1 vs. NCBI nr
Match: KAA0066893.1 (hypothetical protein E6C27_scaffold550G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (312), Expect = 5.86e-35
Identity = 61/72 (84.72%), Postives = 65/72 (90.28%), Query Frame = 0

Query: 1  MMDKSILHRLFVILAGSKYCFTPDITSCSLRPTDLLLNNWFKVQLLNLNLSRTNEKVGPL 60
          MM K ILHRLFVILAGSKYCFT +ITSCSLRPTD LLNNWFKVQ +NLN SR NEKVGPL
Sbjct: 1  MMGKLILHRLFVILAGSKYCFTLEITSCSLRPTDPLLNNWFKVQPINLNPSRANEKVGPL 60

Query: 61 VQDLNSVLKGTT 72
          VQDL+SVL+GTT
Sbjct: 61 VQDLDSVLEGTT 72

BLAST of MELO3C032744.jh1 vs. NCBI nr
Match: KAA0043657.1 (hypothetical protein E6C27_scaffold320G001060 [Cucumis melo var. makuwa] >TYK09704.1 hypothetical protein E5676_scaffold447G001190 [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (311), Expect = 9.66e-35
Identity = 61/72 (84.72%), Postives = 64/72 (88.89%), Query Frame = 0

Query: 1  MMDKSILHRLFVILAGSKYCFTPDITSCSLRPTDLLLNNWFKVQLLNLNLSRTNEKVGPL 60
          MM KSILHRLF+ILAGSKY FTP ITSCSLRPTD LLNNWFKVQ +NL  SR NEKVGPL
Sbjct: 1  MMSKSILHRLFIILAGSKYRFTPKITSCSLRPTDPLLNNWFKVQPINLKPSRANEKVGPL 60

Query: 61 VQDLNSVLKGTT 72
          VQDL+SVLKGTT
Sbjct: 61 VQDLDSVLKGTT 72

BLAST of MELO3C032744.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DV37 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G001140 PE=4 SV=1)

HSP 1 Score: 129 bits (323), Expect = 5.99e-37
Identity = 63/72 (87.50%), Postives = 66/72 (91.67%), Query Frame = 0

Query: 1  MMDKSILHRLFVILAGSKYCFTPDITSCSLRPTDLLLNNWFKVQLLNLNLSRTNEKVGPL 60
          MM K ILHRLFVILAGSKYCFT +ITSCSLRPTDLLLNNWFKVQ +NLN SR NEKVGPL
Sbjct: 1  MMGKLILHRLFVILAGSKYCFTLEITSCSLRPTDLLLNNWFKVQPINLNPSRANEKVGPL 60

Query: 61 VQDLNSVLKGTT 72
          VQDL+SVLKGTT
Sbjct: 61 VQDLDSVLKGTT 72

BLAST of MELO3C032744.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V5Y8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001670 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 1.72e-36
Identity = 62/72 (86.11%), Postives = 66/72 (91.67%), Query Frame = 0

Query: 1  MMDKSILHRLFVILAGSKYCFTPDITSCSLRPTDLLLNNWFKVQLLNLNLSRTNEKVGPL 60
          MM KSILHRLF+ILAGSKY FTP+ITSCSLRPTD LLNNWFKVQ +NLN SR NEKVGPL
Sbjct: 1  MMSKSILHRLFIILAGSKYHFTPEITSCSLRPTDPLLNNWFKVQPINLNPSRANEKVGPL 60

Query: 61 VQDLNSVLKGTT 72
          VQDL+SVLKGTT
Sbjct: 61 VQDLDSVLKGTT 72

BLAST of MELO3C032744.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BN46 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00240 PE=4 SV=1)

HSP 1 Score: 125 bits (315), Expect = 9.91e-36
Identity = 61/72 (84.72%), Postives = 65/72 (90.28%), Query Frame = 0

Query: 1  MMDKSILHRLFVILAGSKYCFTPDITSCSLRPTDLLLNNWFKVQLLNLNLSRTNEKVGPL 60
          MM KSILHRLF+ILAGSKY FTP+ITSCSLRPTD LLNNWFKVQ +NLN SR NEKVGP 
Sbjct: 1  MMSKSILHRLFIILAGSKYHFTPEITSCSLRPTDPLLNNWFKVQPINLNPSRANEKVGPY 60

Query: 61 VQDLNSVLKGTT 72
          VQDL+SVLKGTT
Sbjct: 61 VQDLDSVLKGTT 72

BLAST of MELO3C032744.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VFN6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00050 PE=4 SV=1)

HSP 1 Score: 124 bits (312), Expect = 2.84e-35
Identity = 61/72 (84.72%), Postives = 65/72 (90.28%), Query Frame = 0

Query: 1  MMDKSILHRLFVILAGSKYCFTPDITSCSLRPTDLLLNNWFKVQLLNLNLSRTNEKVGPL 60
          MM K ILHRLFVILAGSKYCFT +ITSCSLRPTD LLNNWFKVQ +NLN SR NEKVGPL
Sbjct: 1  MMGKLILHRLFVILAGSKYCFTLEITSCSLRPTDPLLNNWFKVQPINLNPSRANEKVGPL 60

Query: 61 VQDLNSVLKGTT 72
          VQDL+SVL+GTT
Sbjct: 61 VQDLDSVLEGTT 72

BLAST of MELO3C032744.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TPD5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001190 PE=4 SV=1)

HSP 1 Score: 124 bits (311), Expect = 4.68e-35
Identity = 61/72 (84.72%), Postives = 64/72 (88.89%), Query Frame = 0

Query: 1  MMDKSILHRLFVILAGSKYCFTPDITSCSLRPTDLLLNNWFKVQLLNLNLSRTNEKVGPL 60
          MM KSILHRLF+ILAGSKY FTP ITSCSLRPTD LLNNWFKVQ +NL  SR NEKVGPL
Sbjct: 1  MMSKSILHRLFIILAGSKYRFTPKITSCSLRPTDPLLNNWFKVQPINLKPSRANEKVGPL 60

Query: 61 VQDLNSVLKGTT 72
          VQDL+SVLKGTT
Sbjct: 61 VQDLDSVLKGTT 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK27229.11.24e-3687.50hypothetical protein E5676_scaffold236G001140 [Cucumis melo var. makuwa][more]
KAA0062650.13.54e-3686.11hypothetical protein E6C27_scaffold79G001670 [Cucumis melo var. makuwa][more]
TYK01183.12.05e-3584.72hypothetical protein E5676_scaffold2044G00240 [Cucumis melo var. makuwa][more]
KAA0066893.15.86e-3584.72hypothetical protein E6C27_scaffold550G00050 [Cucumis melo var. makuwa][more]
KAA0043657.19.66e-3584.72hypothetical protein E6C27_scaffold320G001060 [Cucumis melo var. makuwa] >TYK097... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DV375.99e-3787.50Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V5Y81.72e-3686.11Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BN469.91e-3684.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VFN62.84e-3584.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TPD54.68e-3584.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032744.jh1.t1MELO3C032744.jh1.t1mRNA