MELO3C032742 (gene) Melon (DHL92) v4
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAGCAATGTTCCTCCATATTGTTGCGCACGACGTGAAAAACCGTGTCATTCAACGGGAGTTCATGCGGTCGGGTGAGACAATTTCCCGTCATTTTAACATGGTCTTGTTGGTCGTTATTCGGCTTCATGACAAGCTTTTGAAAAAACCACAACCAGTAAATAACGATTGCACAGATCAAAGATGGAGATGGTTTGAGGTGCCTATTTCTCTTCAACTACGTACTTCGAACCCAACAACGTTATATCTTCCCAATAATCTTTAGTTATGCGTTGCAGAATTGCCTAGGTGCATTAGATGGAACATACATAAAAGTCAACGTTCCAGCAAGTGATCGAGCTAGGTATAGAACACACAAGGGGGAGGTGGCCACAAATGTACTTGGCTTGTGTGACACGAAAGGAGATTTTGTTTAAGTACTTGCCGGTTGGGAAGGATCAGCTGCGGACTCACGCATCCTCCATGATGCCATTTCAAGACCTAATGGCCTGAAGGTGCCCAAGGGTAATATCCTACGCCATTGTACATATGACTGCAATTTTGGAATTAACAGCTGCGACATTTTAATCGTGCAATGTGATCATAGGGTATTACTACCTAGTTGATGCGGGGTACCCAAATGTCGATGGTTTTCTAGCAGCGTACAGAGGCCAACGCTACCACTTGCAAGAATGGCGTGGCGTTGAAAATGCACCTTCAACATCAAAAGAGTTCTTCAATATGAAGCATTCGTCTGCTCGTAATGTAATCGAAAGAGCATTCGGTGTCTTGAAGGGTCGATAGGCGATACTGCAGGGAAAGTCATACTATCCTGTAGAAGTTCAATGTCGCACAATACTCACATGTTGTCTCCTCCACAACCTTATCAATAGGGAGATGACAAACTTTGATATAGAAGACAACATAGATGAGGTTGATTCCACCCACGTGACTACTGCCGCCGATGACATACATTACATAGAGACGTCCAATAAGTGGAGTCAATGGAGGGACGACCTTGCAGAAGAAATGTTTACTGATTGGGAGTTGCATAACCAATAGAAAAATTAAATGTTTTCCGTTCATTTTCATACTTAAGTAGTGATTGGACTGGGTCTTATTTTGTCATACTTTTTGGAATATGATTATTTTGAATGTATTGGTTACGCAAGTAAATTACTGCCAAACTGTTTTTCAGTAGAAGTTGATTGTACTATGAAACTAATCGTATGTATGTTATTTAATCATAGGAAAATTAATGAAACTAATATGTTTGTGTTTGACTTCTAACATGACAAGTTCATCGAGACTACCTAAACACAGTTAGACTAAAGAGGAAGAGGCAGGCCTCGTGGAGTGCCTCGTGGAGTTGGTCAATGGTGGTGGGTGGAGGTCCGACAACGGGACCTTTCACCCCGGGTACTTAAATCAGCTGGCGAGAGTGATGGCCTTCAAGATCCTAGGTTGTAATATCCATGCTTCAACCATCGATGGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCGGAGATGCGTGGCCCAATGTGTAGTGGTTTTGGGTGGAATGATGAAAAAAATGCATCGTCGTAGAGAAAGAAGTCTTTGACGATTGGGTCAAGGTGCGTTACTAGTCATTTGAACACTTACTGTACTATATTTCAATAAATGGACTAACAATTTATTATTGCACTTATACAGAGTCATCCGGCAGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCATTATGACGAACTGTCTTACGTGTTTGGTAAAGATCGTGCAACAGAAGGTCGGGCCGAGAGTTTTGCGAACAATGGATCGAACGATCTTGCTGGGTATGATGCATTTATCGCTGACGCTGCGCCGGATATGGATTTCCCGCCAATGTACAGTCAGGGATTGAACATGTCGTTTGATGATTTGATGGGAACAAGAACCGCTCGGGTCAGTGAACGTAGGAATATTTCAAGCGGGTCTAAGCAGAAACGTCTAGGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTACTAAAATGAACAACTGAATCGCATTGCTGAATGGCCTGTCCTACAACGTCAAAAAGCAAGCCAAACACGTCAAGAGGTTGTTCGACAGTTGGAGGCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCCTTCCTTAAAGTTCTCGACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAACCGATGACTAGTTTGTTTGTTGTATTTGTATTAATGAAACTTTTCTTACTTGGA ATGGTAGCAATGTTCCTCCATATTGTTGCGCACGACGTGAAAAACCGTGTCATTCAACGGGAGTTCATGCGGTCGGGTGAGACAATTTCCCGTCATTTTAACATGGTCTTGTTGGTCGTTATTCGGCTTCATGACAAGCTTTTGAAAAAACCACAACCAGTAAATAGAAAATTAATGAAACTAATATGTTTGTGTTTGACTTCTAACATGACAAGTTCATCGAGACTACCTAAACACAGTTAGACTAAAGAGGAAGAGGCAGGCCTCGTGGAGTGCCTCGTGGAGTTGGTCAATGGTGGTGGGTGGAGGTCCGACAACGGGACCTTTCACCCCGGGTACTTAAATCAGCTGGCGAGAGTGATGGCCTTCAAGATCCTAGGTTGTAATATCCATGCTTCAACCATCGATGGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCGGAGATGCGTGGCCCAATGTGTAGTGGTTTTGGGTGGAATGATGAAAAAAATGCATCGTCGTAGAGAAAGAAGTCTTTGACGATTGGGTCAAGAGTCATCCGGCAGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCATTATGACGAACTGTCTTACGTGTTTGGTAAAGATCGTGCAACAGAAGGTCGGGCCGAGAGTTTTGCGAACAATGGATCGAACGATCTTGCTGGGTATGATGCATTTATCGCTGACGCTGCGCCGGATATGGATTTCCCGCCAATGTACAGTCAGGGATTGAACATGTCGTTTGATGATTTGATGGGAACAAGAACCGCTCGGGTCAGTGAACGTAGGAATATTTCAAGCGGGTCTAAGCAGAAACGTCTAGGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTACTAAAATGAACAACTGAATCGCATTGCTGAATGGCCTGTCCTACAACGTCAAAAAGCAAGCCAAACACGTCAAGAGGTTGTTCGACAGTTGGAGGCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCCTTCCTTAAAGTTCTCGACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAACCGATGACTAGTTTGTTTGTTGTATTTGTATTAATGAAACTTTTCTTACTTGGA ATGGTAGCAATGTTCCTCCATATTGTTGCGCACGACGTGAAAAACCGTGTCATTCAACGGGAGTTCATGCGGTCGGGTGAGACAATTTCCCGTCATTTTAACATGGTCTTGTTGGTCGTTATTCGGCTTCATGACAAGCTTTTGAAAAAACCACAACCAGTAAATAGAAAATTAATGAAACTAATATGTTTGTGTTTGACTTCTAACATGACAAGTTCATCGAGACTACCTAAACACAGTTAG MVAMFLHIVAHDVKNRVIQREFMRSGETISRHFNMVLLVVIRLHDKLLKKPQPVNRKLMKLICLCLTSNMTSSSRLPKHS Homology
BLAST of MELO3C032742 vs. NCBI nr
Match: KAA0041291.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 110.2 bits (274), Expect = 8.6e-21 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of MELO3C032742 vs. NCBI nr
Match: TYK02751.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 110.2 bits (274), Expect = 8.6e-21 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of MELO3C032742 vs. NCBI nr
Match: TYK15303.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 104.8 bits (260), Expect = 3.6e-19 Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of MELO3C032742 vs. NCBI nr
Match: KAA0041443.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 104.0 bits (258), Expect = 6.2e-19 Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of MELO3C032742 vs. NCBI nr
Match: KAA0046727.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0056032.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0059561.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0065497.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 103.6 bits (257), Expect = 8.1e-19 Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 0
BLAST of MELO3C032742 vs. ExPASy TrEMBL
Match: A0A5A7TI01 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002840 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 4.2e-21 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of MELO3C032742 vs. ExPASy TrEMBL
Match: A0A5D3BSN2 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold145G00050 PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 4.2e-21 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of MELO3C032742 vs. ExPASy TrEMBL
Match: A0A5D3CTT5 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1706G00100 PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.8e-19 Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of MELO3C032742 vs. ExPASy TrEMBL
Match: A0A5A7TE61 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G00160 PE=3 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.0e-19 Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of MELO3C032742 vs. ExPASy TrEMBL
Match: A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.9e-19 Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 0
BLAST of MELO3C032742 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 1.1e-05 Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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