MELO3C032701 (gene) Melon (DHL92) v4

Overview


Name	MELO3C032701
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr09: 5755187 .. 5755996 (+)
RNA-Seq Expression	MELO3C032701
Synteny	MELO3C032701

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATATTTCAGGACTTTTGATTCTAGCTATGTGTTCGTATTTGCTTATTGAATGTTTGTTTTTATGTCCACAACCATTATGTCATATCGATGTAATAATTTTATGGAGACGGACGATATCTTCCACGAATTTGAGGACAATTTAGATAACATCGCGGGAGGGTCGTCATGTGTAGGCGACAATACGGGTGAGTCTAAGAATTTTCATCATTTTAACTTACAATTATTTCATGTTCTTTTTTTTTTTTTTAACTTTATATGTTATTATCGATTTATTGAGCAGGGTCTTCTTCTCAACAACATGCGACTCCGACTTCTAGGAGACGTGCGCAGTCTTGACTCTTGGAGTTAGAGCGCCATGTTGCAATAAATGGGCGCATTCCGATGACGATCGTCCTTGGAGCGGAGAAGCCTATTTCCCTACACGCCGTTCGCTTCAACTAGGCGATAGGTGTGTGCGTGCGAAAGACATTTCTCGTTCGCTGTCTTAAGTAGGCAGACGTTGAGAGAGAATATATTGAGGTTGTCAAGGGCGACCTCCAGATAATTAAGTGCACTACACATTTATATATGATTTTATTTGAAACATATCTAGCTTTAACCAATCTAATGTGTTATGTGTTTGTAATATGTAGAGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTCAGCATCAGATGCTCACGACCTTTAAAGAGTTCCGGGCCGACTGTCACAGACATTTCAAAAAGTACAGCGACTCGGGGGAGGCTCGTGCCAACCTACCAAACCATTGGTTGGACGTGATGAGGATTGA

mRNA sequence

ATATATTTCAGGACTTTTGATTCTAGCTATGTGTTCGTATTTGCTTATTGAATGTTTGTTTTTATGTCCACAACCATTATGTCATATCGATGTAATAATTTTATGGAGACGGACGATATCTTCCACGAATTTGAGGACAATTTAGATAACATCGCGGGAGGGTCGTCATGTGTAGGCGACAATACGGGGTCTTCTTCTCAACAACATGCGACTCCGACTTCTAGGAGACGTGCGCAGTCTTGACTCTTGGAGTTAGAGCGCCATGTTGCAATAAATGGGCGCATTCCGATGACGATCGTCCTTGGAGCGGAGAAGCCTATTTCCCTACACGCCGTTCGCTTCAACTAGGCGATAGGTGTGTGCGTGCGAAAGACATTTCTCGTTCGCTGTCTTAAGTAGGCAGACGTTGAGAGAGAATATATTGAGGTTGTCAAGGGCGACCTCCAGAGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTCAGCATCAGATGCTCACGACCTTTAAAGAGTTCCGGGCCGACTGTCACAGACATTTCAAAAAGTACAGCGACTCGGGGGAGGCTCGTGCCAACCTACCAAACCATTGGTTGGACGTGATGAGGATTGA

Coding sequence (CDS)

ATGTTTGTTTTTATGTCCACAACCATTATGTCATATCGATGTAATAATTTTATGGAGACGGACGATATCTTCCACGAATTTGAGGACAATTTAGATAACATCGCGGGAGGGTCGTCATGTGTAGGCGACAATACGGGGTCTTCTTCTCAACAACATGCGACTCCGACTTCTAGGAGACGTGCGCAGTCTTGA

Protein sequence

MFVFMSTTIMSYRCNNFMETDDIFHEFEDNLDNIAGGSSCVGDNTGSSSQQHATPTSRRRAQS

Homology

[Close]

BLAST of MELO3C032701 vs. NCBI nr
Match: KAA0047783.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 2.8e-14
Identity = 48/55 (87.27%), Postives = 50/55 (90.91%), Query Frame = 0


Query: 10 MSYRCNNFMETDDIFHEFEDNLDNIAGGSSCVGDNT-GSSSQQHATPTSRRRAQS 64
          MSYR NNF+ET+DIF EFEDNLDNIAGGSS VGDNT GSSSQQHATPT RRRAQS
Sbjct: 1  MSYRRNNFIETNDIFLEFEDNLDNIAGGSSSVGDNTAGSSSQQHATPTPRRRAQS 55

[Close]

BLAST of MELO3C032701 vs. NCBI nr
Match: KAA0037869.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYJ98007.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 87.4 bits (215), Expect = 4.7e-14
Identity = 44/55 (80.00%), Postives = 49/55 (89.09%), Query Frame = 0


Query: 9   IMSYRCNNFMETDDIFHEFEDNLDNIAGGSSCVGDNTGSSSQQHATPTSRRRAQS 64
           I+SY+ NNFMET+D F EFED+LDNIAGGSS +GDNTGSSSQQHATPT RRRA S
Sbjct: 53  IVSYQHNNFMETNDTFFEFEDDLDNIAGGSSSIGDNTGSSSQQHATPTPRRRAHS 107

[Close]

BLAST of MELO3C032701 vs. NCBI nr
Match: KAA0040340.1 (hypothetical protein E6C27_scaffold460G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 2.3e-13
Identity = 44/53 (83.02%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 10  MSYRCNNFMETDDIFHEFEDNLDNIAGGSSCVGDNTGSSSQQHATPTSRRRAQ 63
           MSY  NNFME DD+F EFEDNLDNIAGGSS VGDNTGSSSQQ+ATPT RRR Q
Sbjct: 604 MSYPRNNFMEMDDMFLEFEDNLDNIAGGSSSVGDNTGSSSQQYATPTPRRRVQ 656

[Close]

BLAST of MELO3C032701 vs. NCBI nr
Match: TYK23363.1 (hypothetical protein E5676_scaffold142G004270 [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 2.3e-13
Identity = 44/53 (83.02%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 10  MSYRCNNFMETDDIFHEFEDNLDNIAGGSSCVGDNTGSSSQQHATPTSRRRAQ 63
           MSY  NNFME DD+F EFEDNLDNIAGGSS VGDNTGSSSQQ+ATPT RRR Q
Sbjct: 604 MSYPRNNFMEMDDMFLEFEDNLDNIAGGSSSVGDNTGSSSQQYATPTPRRRVQ 656

[Close]

BLAST of MELO3C032701 vs. NCBI nr
Match: KAA0063477.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 8.9e-13
Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 9   IMSYRCNNFMETDDIFHEFEDNLDNIAGGSSCVGDNTGSSSQQHATPTSRRRAQS 64
           IMSYR +NFMETDD+F +FED+LDNIAGGSS VGDNT  SS QH TPT RRRAQS
Sbjct: 129 IMSYRRSNFMETDDMFLKFEDDLDNIAGGSSSVGDNTTGSSSQHTTPTPRRRAQS 183

[Close]

BLAST of MELO3C032701 vs. ExPASy TrEMBL
Match: A0A5A7TW39 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00190 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.3e-14
Identity = 48/55 (87.27%), Postives = 50/55 (90.91%), Query Frame = 0


Query: 10 MSYRCNNFMETDDIFHEFEDNLDNIAGGSSCVGDNT-GSSSQQHATPTSRRRAQS 64
          MSYR NNF+ET+DIF EFEDNLDNIAGGSS VGDNT GSSSQQHATPT RRRAQS
Sbjct: 1  MSYRRNNFIETNDIFLEFEDNLDNIAGGSSSVGDNTAGSSSQQHATPTPRRRAQS 55

[Close]

BLAST of MELO3C032701 vs. ExPASy TrEMBL
Match: A0A5D3BFW0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00300 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.3e-14
Identity = 44/55 (80.00%), Postives = 49/55 (89.09%), Query Frame = 0


Query: 9   IMSYRCNNFMETDDIFHEFEDNLDNIAGGSSCVGDNTGSSSQQHATPTSRRRAQS 64
           I+SY+ NNFMET+D F EFED+LDNIAGGSS +GDNTGSSSQQHATPT RRRA S
Sbjct: 53  IVSYQHNNFMETNDTFFEFEDDLDNIAGGSSSIGDNTGSSSQQHATPTPRRRAHS 107

[Close]

BLAST of MELO3C032701 vs. ExPASy TrEMBL
Match: A0A5D3DIE6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G004270 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-13
Identity = 44/53 (83.02%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 10  MSYRCNNFMETDDIFHEFEDNLDNIAGGSSCVGDNTGSSSQQHATPTSRRRAQ 63
           MSY  NNFME DD+F EFEDNLDNIAGGSS VGDNTGSSSQQ+ATPT RRR Q
Sbjct: 604 MSYPRNNFMEMDDMFLEFEDNLDNIAGGSSSVGDNTGSSSQQYATPTPRRRVQ 656

[Close]

BLAST of MELO3C032701 vs. ExPASy TrEMBL
Match: A0A5A7TAJ7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold460G00450 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-13
Identity = 44/53 (83.02%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 10  MSYRCNNFMETDDIFHEFEDNLDNIAGGSSCVGDNTGSSSQQHATPTSRRRAQ 63
           MSY  NNFME DD+F EFEDNLDNIAGGSS VGDNTGSSSQQ+ATPT RRR Q
Sbjct: 604 MSYPRNNFMEMDDMFLEFEDNLDNIAGGSSSVGDNTGSSSQQYATPTPRRRVQ 656

[Close]

BLAST of MELO3C032701 vs. ExPASy TrEMBL
Match: A0A5A7V916 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold977G00660 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.3e-13
Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 9   IMSYRCNNFMETDDIFHEFEDNLDNIAGGSSCVGDNTGSSSQQHATPTSRRRAQS 64
           IMSYR +NFMETDD+F +FED+LDNIAGGSS VGDNT  SS QH TPT RRRAQS
Sbjct: 129 IMSYRRSNFMETDDMFLKFEDDLDNIAGGSSSVGDNTTGSSSQHTTPTPRRRAQS 183

The following BLAST results are available for this feature:

BLAST of MELO3C032701 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047783.1	2.8e-14	87.27	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0037869.1	4.7e-14	80.00	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYJ98007.1 CACTA en-...	[more]
KAA0040340.1	2.3e-13	83.02	hypothetical protein E6C27_scaffold460G00450 [Cucumis melo var. makuwa]	[more]
TYK23363.1	2.3e-13	83.02	hypothetical protein E5676_scaffold142G004270 [Cucumis melo var. makuwa]	[more]
KAA0063477.1	8.9e-13	78.18	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C032701 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032701 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TW39	1.3e-14	87.27	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3BFW0	2.3e-14	80.00	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3DIE6	1.1e-13	83.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TAJ7	1.1e-13	83.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V916	4.3e-13	78.18	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of MELO3C032701 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032701.1	MELO3C032701.1	mRNA