MELO3C032617.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C032617.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionMajor pollen allergen Ole e 6-like
Locationchr07: 24097140 .. 24098182 (-)
RNA-Seq ExpressionMELO3C032617.jh1
SyntenyMELO3C032617.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACTAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACAGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAACGTAATGCCTCAATTCAAATCATGTGTAGAAACCTGCGCGAAAGCATGCATTGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATTGTCTTGAATCTTTGGAGAAATGTTTTTTTTTTAACCAAGACGATAAATAATTTTTTTTGTGTGCGGTCAATTTTAGTTGCGAGGCAAACTTCACTTTTATTATGGAAATTAGTGAGTTTTGTAAGGTAAGGTCGGTACGTGTTCCATACTTTAATATAGTTTTGCTGCTCGAATTTGAAGGGATATGAGATAATTGAAAATTTAGAATGAGAACTCCTGTCAAAATTTAAGGAAAATTTAGTTGTTTAATTCTCCCAACTTATTGATCTTTTTCTTTTTGTGTGTGTATTAACTTGATTTTTTATTCGTCTGTTTTGCAGATAAAATCAGCGACAAACTAGGCATTCGTAATTAACCATGAAATTAAAGTTAGGACGTGGAAAATGGTCGGATCAAGTATAAATTATCTGGATAATTAACATTTCAGAGAGGAAAATCTAAATTCCTTGACCCTCGTCTCTTTCATTTTTGTCATCCAATTGGTTGCTTCTTTATATAAAGGTTTTATGTTATGTATCGGACCGGTCTTCTTTCATCATTATTTTCAACAACGAGATCAATAAAATTCATCTAATTTTTGTGTTTGTTCACATAATTATTTATGTCTTACATTTAATTATTTTTAATCCTAGTGTGTAGAAGAAATTTTGCTACAATATCACATTATTTTTAATCCTAATGTGTAGAAGAAATTTTGCGACAATATCACATTATTATTCAAGTTGTGAGTTTCTTTTGTCA

mRNA sequence

AAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACTAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACAGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAACGTAATGCCTCAATTCAAATCATGTGTAGAAACCTGCGCGAAAGCATGCATTGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGATAAAATCAGCGACAAACTAGGCATTCGTAATTAACCATGAAATTAAAGTTAGGACGTGGAAAATGGTCGGATCAAGTATAAATTATCTGGATAATTAACATTTCAGAGAGGAAAATCTAAATTCCTTGACCCTCGTCTCTTTCATTTTTGTCATCCAATTGGTTGCTTCTTTATATAAAGGTTTTATGTTATGTATCGGACCGGTCTTCTTTCATCATTATTTTCAACAACGAGATCAATAAAATTCATCTAATTTTTGTGTTTGTTCACATAATTATTTATGTCTTACATTTAATTATTTTTAATCCTAGTGTGTAGAAGAAATTTTGCTACAATATCACATTATTTTTAATCCTAATGTGTAGAAGAAATTTTGCGACAATATCACATTATTATTCAAGTTGTGAGTTTCTTTTGTCA

Coding sequence (CDS)

ATGGCAAAAACTAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACAGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAACGTAATGCCTCAATTCAAATCATGTGTAGAAACCTGCGCGAAAGCATGCATTGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGATAAAATCAGCGACAAACTAGGCATTCGTAATTAA

Protein sequence

MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETCAKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN
Homology
BLAST of MELO3C032617.jh1 vs. NCBI nr
Match: KAA0036015.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 192 bits (487), Expect = 2.14e-61
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAK+ST+VFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC
Sbjct: 1  MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99
          AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN
Sbjct: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99

BLAST of MELO3C032617.jh1 vs. NCBI nr
Match: KAA0035393.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 166 bits (419), Expect = 4.33e-51
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVV 88
           KACIAKD ANTSCHSTCDKDCMKKEVV
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88

BLAST of MELO3C032617.jh1 vs. NCBI nr
Match: KAE8637567.1 (hypothetical protein CSA_017844, partial [Cucumis sativus])

HSP 1 Score: 75.5 bits (184), Expect = 3.82e-15
Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 0

Query: 3   KTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQ-SEISNVMPQFKSCVETCA 62
           K   VVFFMCIVV+ GSLQFS+A  TA    +++   K+   +E   + PQ +SCV TC 
Sbjct: 20  KNIMVVFFMCIVVM-GSLQFSKAQTTANMSPDLQAAEKIKSIAEGMKLWPQMESCVLTCR 79

Query: 63  KACIAKDSANTSCHSTCDKDCMKKEV 87
           K C AK +AN SCH  C+ DC +K +
Sbjct: 80  KECDAKGNANASCHQKCNNDCTEKTI 104

BLAST of MELO3C032617.jh1 vs. NCBI nr
Match: KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 68.2 bits (165), Expect = 1.63e-12
Identity = 43/95 (45.26%), Postives = 53/95 (55.79%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAK    V  MC V+VV +LQFS    TA++ TE+E + K   S+   V  +FKSC  TC
Sbjct: 1  MAKKMMAVVLMC-VLVVSALQFS----TADKSTEMEAKFKSFFSDFGTVEAKFKSCAATC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKL 95
           K C      N SC S CD DC KKEV +K   K+
Sbjct: 61 QKKC-----TNASCRSKCDADCGKKEVENKFKIKI 85

BLAST of MELO3C032617.jh1 vs. NCBI nr
Match: KAG6590397.1 (hypothetical protein SDJN03_15820, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 67.0 bits (162), Expect = 4.87e-12
Identity = 41/95 (43.16%), Postives = 52/95 (54.74%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAK    VF MC V++V  LQFS AD T     E+E + K   S+   V  + K+C+ETC
Sbjct: 1  MAKRMMAVFLMC-VLLVNVLQFSTADKTT---AEMEAKMKSFFSDFGTVKEKLKTCIETC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKL 95
           K C      N  CHS C  +C KKEV DK + K+
Sbjct: 61 NKGC----KGNNKCHSDCATNCGKKEVADKYNMKM 87

BLAST of MELO3C032617.jh1 vs. ExPASy TrEMBL
Match: A0A5A7T3F9 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00090 PE=4 SV=1)

HSP 1 Score: 192 bits (487), Expect = 1.04e-61
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAK+ST+VFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC
Sbjct: 1  MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99
          AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN
Sbjct: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99

BLAST of MELO3C032617.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SXV7 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13030G00010 PE=4 SV=1)

HSP 1 Score: 166 bits (419), Expect = 2.10e-51
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVV 88
           KACIAKD ANTSCHSTCDKDCMKKEVV
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88

BLAST of MELO3C032617.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EQ21 (major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.03e-04
Identity = 33/96 (34.38%), Postives = 47/96 (48.96%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTA-ERDTEIEMRSKLLQSEISNVMPQFKSCVET 60
          MAK    V  +CIVVV  +LQ S A  +A E   E +  +K            ++ C E 
Sbjct: 1  MAKKMIAVLLVCIVVV-AALQVSSATESAKEAKYEAKFEAK------------YRLCYEK 60

Query: 61 CAKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKL 95
          C K C+ K +  + C   CD+DC +KE  DK+  K+
Sbjct: 61 CEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV 83

BLAST of MELO3C032617.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JVQ4 (major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488292 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.06e-04
Identity = 29/95 (30.53%), Postives = 43/95 (45.26%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAK    V  +CIVV+      S  +   E   E +  +K            ++ C E C
Sbjct: 1  MAKKIIAVLLVCIVVMAALQVSSATESVKEAKYEAKFEAK------------YRLCYEKC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKL 95
           K C+ K +  + C   CD+DC +KEV DK+  K+
Sbjct: 61 EKECLEKGNDQSFCEVKCDEDCDEKEVADKLHIKV 83

BLAST of MELO3C032617.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JXL5 (major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488756 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 2.91e-04
Identity = 28/95 (29.47%), Postives = 42/95 (44.21%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAK    V  +CIVV+      S  +   E   E +  +K            ++ C E C
Sbjct: 1  MAKKMIAVLLVCIVVMAALQVSSATESVKEAKYEAKFEAK------------YRLCYEKC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKL 95
           K C+ K +  + C   CD+DC +KE  DK+  K+
Sbjct: 61 EKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0036015.12.14e-6197.98major pollen allergen Ole e 6-like [Cucumis melo var. makuwa][more]
KAA0035393.14.33e-5195.45major pollen allergen Ole e 6-like [Cucumis melo var. makuwa][more]
KAE8637567.13.82e-1547.67hypothetical protein CSA_017844, partial [Cucumis sativus][more]
KAG6595593.11.63e-1245.26hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6590397.14.87e-1243.16hypothetical protein SDJN03_15820, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T3F91.04e-6197.98Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A5A7SXV72.10e-5195.45Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A6J1EQ211.03e-0434.38major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354... [more]
A0A6J1JVQ42.06e-0430.53major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488292 P... [more]
A0A6J1JXL52.91e-0429.47major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488756 P... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036466Pollen allergen ole e 6 superfamilyGENE3D1.10.287.720Pollen allergen ole e 6coord: 51..95
e-value: 1.8E-10
score: 42.2
IPR036466Pollen allergen ole e 6 superfamilySUPERFAMILY111388Pollen allergen ole e 6coord: 52..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032617.jh1.t2MELO3C032617.jh1.t2mRNA