Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATGAACAAAAAAAAAACCTTAGAATTACTGTATACTATAGCTTAGAAACATTGAATCAGATCAAGTCAAAAATAGATAAAAGGATTCTATCTCAAGTTTTGACAAACAGCCCTTTTGGCCAGTTTCTTAACATTAAAATGACCAAAATACCAACAAAATTCCTGAATTTTCTATTAAGAAAACAATACCATACAAAAAAAAAAACTAATGTCCTTGCTTTCAACTTCAATGAACATATAGCAGAATTTGCGCTGAAAGGCTTTTGTTTTGTGACTGGACTAAAAGGTCACAAATTCCCTGAGTTAAATCTAGGAGAAAGAAAACAAAATGGTCTAAAAAATGCGTTGTTCCGTCATGATGACTTTATAACAAGAAGAGATATAGAAAGAACTTTCAAAGCATTGTACAATGAGGAAGACTCATTGAAAGAAAAACTAGTTAACCTCTATATCTTAGAAGCATTTTTAATTCCCAAACAACAACACAACCACATAAATCTCCTACATCTAGACATATTGGATAATGAAGAAATCTTCAAAGGCTATCCATGGGGGATGCTATCATACATCCTAACATATCAGTTCTTGAAAAGCATCCTATAG
mRNA sequence
ATGGAAGATGAACAAAAAAAAAACCTTAGAATTACTGTATACTATAGCTTAGAAACATTGAATCAGATCAAGTCAAAAATAGATAAAAGGATTCTATCTCAAGTTTTGACAAACAGCCCTTTTGGCCAGTTTCTTAACATTAAAATGACCAAAATACCAACAAAATTCCTGAATTTTCTATTAAGAAAACAATACCATACAAAAAAAAAAACTAATGTCCTTGCTTTCAACTTCAATGAACATATAGCAGAATTTGCGCTGAAAGGCTTTTGTTTTGTGACTGGACTAAAAGGTCACAAATTCCCTGAGTTAAATCTAGGAGAAAGAAAACAAAATGGTCTAAAAAATGCGTTGTTCCGTCATGATGACTTTATAACAAGAAGAGATATAGAAAGAACTTTCAAAGCATTGTACAATGAGGAAGACTCATTGAAAGAAAAACTAGTTAACCTCTATATCTTAGAAGCATTTTTAATTCCCAAACAACAACACAACCACATAAATCTCCTACATCTAGACATATTGGATAATGAAGAAATCTTCAAAGGCTATCCATGGGGGATGCTATCATACATCCTAACATATCAGTTCTTGAAAAGCATCCTATAG
Coding sequence (CDS)
ATGGAAGATGAACAAAAAAAAAACCTTAGAATTACTGTATACTATAGCTTAGAAACATTGAATCAGATCAAGTCAAAAATAGATAAAAGGATTCTATCTCAAGTTTTGACAAACAGCCCTTTTGGCCAGTTTCTTAACATTAAAATGACCAAAATACCAACAAAATTCCTGAATTTTCTATTAAGAAAACAATACCATACAAAAAAAAAAACTAATGTCCTTGCTTTCAACTTCAATGAACATATAGCAGAATTTGCGCTGAAAGGCTTTTGTTTTGTGACTGGACTAAAAGGTCACAAATTCCCTGAGTTAAATCTAGGAGAAAGAAAACAAAATGGTCTAAAAAATGCGTTGTTCCGTCATGATGACTTTATAACAAGAAGAGATATAGAAAGAACTTTCAAAGCATTGTACAATGAGGAAGACTCATTGAAAGAAAAACTAGTTAACCTCTATATCTTAGAAGCATTTTTAATTCCCAAACAACAACACAACCACATAAATCTCCTACATCTAGACATATTGGATAATGAAGAAATCTTCAAAGGCTATCCATGGGGGATGCTATCATACATCCTAACATATCAGTTCTTGAAAAGCATCCTATAG
Protein sequence
MEDEQKKNLRITVYYSLETLNQIKSKIDKRILSQVLTNSPFGQFLNIKMTKIPTKFLNFLLRKQYHTKKKTNVLAFNFNEHIAEFALKGFCFVTGLKGHKFPELNLGERKQNGLKNALFRHDDFITRRDIERTFKALYNEEDSLKEKLVNLYILEAFLIPKQQHNHINLLHLDILDNEEIFKGYPWGMLSYILTYQFLKSIL
Homology
BLAST of MELO3C032522 vs. NCBI nr
Match:
XP_022132727.1 (uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132728.1 uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132729.1 uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132730.1 uncharacterized protein LOC111005524 [Momordica charantia])
HSP 1 Score: 100.9 bits (250), Expect = 1.3e-17
Identity = 60/193 (31.09%), Postives = 103/193 (53.37%), Query Frame = 0
Query: 10 RITVYYSLETLNQIKSKIDKRILSQVLTNSPFGQFLNIKMTKIPTKFLNFLLRKQYHTKK 69
RI +Y + ++ IK+ +++R L +L S FG FL+ K+TK ++ L+R+Q + K
Sbjct: 256 RINLYSKPDVISLIKNTLNERQL-DMLRRSCFGNFLDFKITKFSSQLFYHLIRRQC-SSK 315
Query: 70 KTNVLAFNFNEHIAEFALKGFCFVTGLKGHKFPELNLGERKQNGLKNALFRHDDFITRRD 129
N L FN + +F +K F +TG+ + P +++ + ++ F + I R
Sbjct: 316 NPNELWFNLEGRVHKFGIKDFALITGMNCGELPTIDMSKIQRAWFSKRYFGGERTIKRTK 375
Query: 130 IERTFKALYNEEDSLKEKLVNLYILEAFLIPKQQHNHINLLHLDILDNEEIFKGYPWGML 189
+ F + D K+ LYILE FL+ KQ IN + ++D++E F+GYPWG +
Sbjct: 376 LPEIFMEMDKGRDKDVVKMAKLYILEMFLLGKQITTGINHEYTLLIDDDEQFEGYPWGRV 435
Query: 190 SYILTYQFLKSIL 203
SY +T F+K +
Sbjct: 436 SYEITIDFVKKAI 446
BLAST of MELO3C032522 vs. NCBI nr
Match:
KAA0047596.1 (protein Ycf2-like [Cucumis melo var. makuwa])
HSP 1 Score: 98.6 bits (244), Expect = 6.6e-17
Identity = 56/201 (27.86%), Postives = 107/201 (53.23%), Query Frame = 0
Query: 3 DEQKKNLRITVYYSLETLNQIKSKIDKRILSQVLTNSPFGQFLNIKMTKIPTKFLNFLLR 62
+ + + L+I ++ + +IK + R++++ FG FLN+ +T ++ L L++
Sbjct: 172 ERRNEPLKINLHIKSTVIEKIKENLGDRLINR-FREGIFGHFLNLSITNQSSQLLLHLIQ 231
Query: 63 KQYHTKKKTNVLAFNFNEHIAEFALKGFCFVTGLKGHKFPELNLGERKQNG-LKNALFRH 122
+ K T+ L F + F L+ F +TGL+ H+ P++N + G LK F +
Sbjct: 232 RMC-KPKSTSQLQFLIGGRVLRFGLREFALITGLRCHEIPDINHEDINGGGRLKGVYFEN 291
Query: 123 DDFITRRDIERTFKALYNEEDSLKEKLVNLYILEAFLIPKQQHNHINLLHLDILDNEEIF 182
+TR+ + F D + K+ LY LE+FLIPKQ+ ++ H+ ++D++E+F
Sbjct: 292 LKTVTRQYLNVMFNISTTGTDDDRIKMAKLYFLESFLIPKQECPSVDWDHIIMVDDDEVF 351
Query: 183 KGYPWGMLSYILTYQFLKSIL 203
GYPWG +++ L F+ ++
Sbjct: 352 DGYPWGRVAFELLVDFMNRVV 370
BLAST of MELO3C032522 vs. NCBI nr
Match:
XP_038883715.1 (uncharacterized protein LOC120074618 isoform X1 [Benincasa hispida])
HSP 1 Score: 98.2 bits (243), Expect = 8.6e-17
Identity = 59/193 (30.57%), Postives = 103/193 (53.37%), Query Frame = 0
Query: 10 RITVYYSLETLNQIKSKIDKRILSQVLTNSPFGQFLNIKMTKIPTKFLNFLLRKQYHTKK 69
RI +Y L+ ++ IK+ +++R L + S FG FL++K+TK ++ L+R+Q +
Sbjct: 580 RINLYSKLDVISVIKNTLNERQLKK-FKKSCFGDFLDLKITKFSSQLFYHLVRRQCCSTN 639
Query: 70 KTNVLAFNFNEHIAEFALKGFCFVTGLKGHKFPELNLGERKQNGLKNALFRHDDFITRRD 129
+ N L FN I +F +K F +TGL + PE+++ + ++ F + I R
Sbjct: 640 R-NELWFNLEGRIHKFGMKEFSLITGLNCGELPEIDMSKIQKGKFNKRYFGGEKTIKRTK 699
Query: 130 IERTFKALYNEEDSLKEKLVNLYILEAFLIPKQQHNHINLLHLDILDNEEIFKGYPWGML 189
+ F + + K+ LYILE F++ KQ IN + ++D++E F YPWG +
Sbjct: 700 LHEVFTEMDKGRNKDVVKMAKLYILEMFILGKQIRTGINHEYTLLVDDKEQFDRYPWGRI 759
Query: 190 SYILTYQFLKSIL 203
SY +T F+K +
Sbjct: 760 SYEITIDFVKKAI 770
BLAST of MELO3C032522 vs. NCBI nr
Match:
XP_038883719.1 (uncharacterized protein LOC120074618 isoform X5 [Benincasa hispida])
HSP 1 Score: 98.2 bits (243), Expect = 8.6e-17
Identity = 59/193 (30.57%), Postives = 103/193 (53.37%), Query Frame = 0
Query: 10 RITVYYSLETLNQIKSKIDKRILSQVLTNSPFGQFLNIKMTKIPTKFLNFLLRKQYHTKK 69
RI +Y L+ ++ IK+ +++R L + S FG FL++K+TK ++ L+R+Q +
Sbjct: 574 RINLYSKLDVISVIKNTLNERQLKK-FKKSCFGDFLDLKITKFSSQLFYHLVRRQCCSTN 633
Query: 70 KTNVLAFNFNEHIAEFALKGFCFVTGLKGHKFPELNLGERKQNGLKNALFRHDDFITRRD 129
+ N L FN I +F +K F +TGL + PE+++ + ++ F + I R
Sbjct: 634 R-NELWFNLEGRIHKFGMKEFSLITGLNCGELPEIDMSKIQKGKFNKRYFGGEKTIKRTK 693
Query: 130 IERTFKALYNEEDSLKEKLVNLYILEAFLIPKQQHNHINLLHLDILDNEEIFKGYPWGML 189
+ F + + K+ LYILE F++ KQ IN + ++D++E F YPWG +
Sbjct: 694 LHEVFTEMDKGRNKDVVKMAKLYILEMFILGKQIRTGINHEYTLLVDDKEQFDRYPWGRI 753
Query: 190 SYILTYQFLKSIL 203
SY +T F+K +
Sbjct: 754 SYEITIDFVKKAI 764
BLAST of MELO3C032522 vs. NCBI nr
Match:
XP_024031030.1 (uncharacterized protein LOC21394043 [Morus notabilis] >XP_024031031.1 uncharacterized protein LOC21394043 [Morus notabilis] >XP_024031032.1 uncharacterized protein LOC21394043 [Morus notabilis] >XP_024031033.1 uncharacterized protein LOC21394043 [Morus notabilis])
HSP 1 Score: 98.2 bits (243), Expect = 8.6e-17
Identity = 59/190 (31.05%), Postives = 98/190 (51.58%), Query Frame = 0
Query: 10 RITVYYSLETLNQIKSKIDKRILSQVLTNSPFGQFLNIKMTKIPTKFLNFLLRKQYHTKK 69
+I +Y + ++ + K+ R ++ FG L+ K+ K P++ ++ L+ +Q K
Sbjct: 98 KINLYSKAKVVDILNEKLTAR-QKELFRKGCFGHLLDFKIKKFPSQLIHHLILRQCPQAK 157
Query: 70 KTNVLAFNFNEHIAEFALKGFCFVTGLKGHKFPELNLGERKQNGLKNALFRHDDFITRRD 129
K N L F+ I +F +K F +TGL +P + + ++ K FR + R
Sbjct: 158 K-NELWFDIEGAIVKFGMKEFALITGLNCSNYPFIFEKQLPESTTKRKFFRKGKSVQRIK 217
Query: 130 IERTFKALYNEEDSLKEKLVNLYILEAFLIPKQQHNHINLLHLDILDNEEIFKGYPWGML 189
+ F+A D KL LY LE+ LIPK+ N+I+ HL ++DN E+F YPWG L
Sbjct: 218 LNDVFRANRGGTDEDIVKLAKLYCLESLLIPKKIENNIDPNHLKMVDNPELFDNYPWGRL 277
Query: 190 SYILTYQFLK 200
SY +T ++K
Sbjct: 278 SYEMTIAYIK 285
BLAST of MELO3C032522 vs. ExPASy TrEMBL
Match:
A0A6J1BX50 (uncharacterized protein LOC111005524 OS=Momordica charantia OX=3673 GN=LOC111005524 PE=4 SV=1)
HSP 1 Score: 100.9 bits (250), Expect = 6.4e-18
Identity = 60/193 (31.09%), Postives = 103/193 (53.37%), Query Frame = 0
Query: 10 RITVYYSLETLNQIKSKIDKRILSQVLTNSPFGQFLNIKMTKIPTKFLNFLLRKQYHTKK 69
RI +Y + ++ IK+ +++R L +L S FG FL+ K+TK ++ L+R+Q + K
Sbjct: 256 RINLYSKPDVISLIKNTLNERQL-DMLRRSCFGNFLDFKITKFSSQLFYHLIRRQC-SSK 315
Query: 70 KTNVLAFNFNEHIAEFALKGFCFVTGLKGHKFPELNLGERKQNGLKNALFRHDDFITRRD 129
N L FN + +F +K F +TG+ + P +++ + ++ F + I R
Sbjct: 316 NPNELWFNLEGRVHKFGIKDFALITGMNCGELPTIDMSKIQRAWFSKRYFGGERTIKRTK 375
Query: 130 IERTFKALYNEEDSLKEKLVNLYILEAFLIPKQQHNHINLLHLDILDNEEIFKGYPWGML 189
+ F + D K+ LYILE FL+ KQ IN + ++D++E F+GYPWG +
Sbjct: 376 LPEIFMEMDKGRDKDVVKMAKLYILEMFLLGKQITTGINHEYTLLIDDDEQFEGYPWGRV 435
Query: 190 SYILTYQFLKSIL 203
SY +T F+K +
Sbjct: 436 SYEITIDFVKKAI 446
BLAST of MELO3C032522 vs. ExPASy TrEMBL
Match:
A0A5A7U047 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00640 PE=4 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 3.2e-17
Identity = 56/201 (27.86%), Postives = 107/201 (53.23%), Query Frame = 0
Query: 3 DEQKKNLRITVYYSLETLNQIKSKIDKRILSQVLTNSPFGQFLNIKMTKIPTKFLNFLLR 62
+ + + L+I ++ + +IK + R++++ FG FLN+ +T ++ L L++
Sbjct: 172 ERRNEPLKINLHIKSTVIEKIKENLGDRLINR-FREGIFGHFLNLSITNQSSQLLLHLIQ 231
Query: 63 KQYHTKKKTNVLAFNFNEHIAEFALKGFCFVTGLKGHKFPELNLGERKQNG-LKNALFRH 122
+ K T+ L F + F L+ F +TGL+ H+ P++N + G LK F +
Sbjct: 232 RMC-KPKSTSQLQFLIGGRVLRFGLREFALITGLRCHEIPDINHEDINGGGRLKGVYFEN 291
Query: 123 DDFITRRDIERTFKALYNEEDSLKEKLVNLYILEAFLIPKQQHNHINLLHLDILDNEEIF 182
+TR+ + F D + K+ LY LE+FLIPKQ+ ++ H+ ++D++E+F
Sbjct: 292 LKTVTRQYLNVMFNISTTGTDDDRIKMAKLYFLESFLIPKQECPSVDWDHIIMVDDDEVF 351
Query: 183 KGYPWGMLSYILTYQFLKSIL 203
GYPWG +++ L F+ ++
Sbjct: 352 DGYPWGRVAFELLVDFMNRVV 370
BLAST of MELO3C032522 vs. ExPASy TrEMBL
Match:
W9SF50 (DUF1985 domain-containing protein OS=Morus notabilis OX=981085 GN=L484_010758 PE=4 SV=1)
HSP 1 Score: 98.2 bits (243), Expect = 4.1e-17
Identity = 59/190 (31.05%), Postives = 98/190 (51.58%), Query Frame = 0
Query: 10 RITVYYSLETLNQIKSKIDKRILSQVLTNSPFGQFLNIKMTKIPTKFLNFLLRKQYHTKK 69
+I +Y + ++ + K+ R ++ FG L+ K+ K P++ ++ L+ +Q K
Sbjct: 98 KINLYSKAKVVDILNEKLTAR-QKELFRKGCFGHLLDFKIKKFPSQLIHHLILRQCPQAK 157
Query: 70 KTNVLAFNFNEHIAEFALKGFCFVTGLKGHKFPELNLGERKQNGLKNALFRHDDFITRRD 129
K N L F+ I +F +K F +TGL +P + + ++ K FR + R
Sbjct: 158 K-NELWFDIEGAIVKFGMKEFALITGLNCSNYPFIFEKQLPESTTKRKFFRKGKSVQRIK 217
Query: 130 IERTFKALYNEEDSLKEKLVNLYILEAFLIPKQQHNHINLLHLDILDNEEIFKGYPWGML 189
+ F+A D KL LY LE+ LIPK+ N+I+ HL ++DN E+F YPWG L
Sbjct: 218 LNDVFRANRGGTDEDIVKLAKLYCLESLLIPKKIENNIDPNHLKMVDNPELFDNYPWGRL 277
Query: 190 SYILTYQFLK 200
SY +T ++K
Sbjct: 278 SYEMTIAYIK 285
BLAST of MELO3C032522 vs. ExPASy TrEMBL
Match:
A0A0A0KI50 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G489950 PE=4 SV=1)
HSP 1 Score: 97.4 bits (241), Expect = 7.1e-17
Identity = 57/190 (30.00%), Postives = 103/190 (54.21%), Query Frame = 0
Query: 10 RITVYYSLETLNQIKSKIDKRILSQVLTNSPFGQFLNIKMTKIPTKFLNFLLRKQYHTKK 69
RI +Y L+ ++ IK+ +++R L + S FG FL++K++K ++ L+R+Q +K
Sbjct: 587 RINLYSKLDVISIIKNTLNERQLKK-FKKSCFGNFLDLKISKFSSQLFYHLIRRQCCSKN 646
Query: 70 KTNVLAFNFNEHIAEFALKGFCFVTGLKGHKFPELNLGERKQNGLKNALFRHDDFITRRD 129
+ N L FN I +F +K F +TGL + P +++ + ++ F + I R
Sbjct: 647 R-NELWFNLEGRIHKFGMKDFALITGLNCGELPAIDMSKIQKGKFNKRYFGGEKTIRRAK 706
Query: 130 IERTFKALYNEEDSLKEKLVNLYILEAFLIPKQQHNHINLLHLDILDNEEIFKGYPWGML 189
+ + F + + K+ LYILE F++ KQ IN + ++D+++ F YPWG +
Sbjct: 707 LHKVFTEMDKGRNKDVVKMAKLYILEMFILGKQIRTGINHEYTLLIDDKKQFDSYPWGRI 766
Query: 190 SYILTYQFLK 200
SY +T F+K
Sbjct: 767 SYEITVDFVK 774
BLAST of MELO3C032522 vs. ExPASy TrEMBL
Match:
A0A5D3CNI7 (TF-B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005170 PE=4 SV=1)
HSP 1 Score: 96.7 bits (239), Expect = 1.2e-16
Identity = 57/193 (29.53%), Postives = 103/193 (53.37%), Query Frame = 0
Query: 10 RITVYYSLETLNQIKSKIDKRILSQVLTNSPFGQFLNIKMTKIPTKFLNFLLRKQYHTKK 69
RI +Y L+ ++ IK+ +++R L + S FG FL++K++K ++ L+R+Q +K
Sbjct: 642 RINLYSKLDVISIIKNTLNERQLKK-FKKSCFGYFLDLKVSKFSSQLFYHLIRRQCCSKN 701
Query: 70 KTNVLAFNFNEHIAEFALKGFCFVTGLKGHKFPELNLGERKQNGLKNALFRHDDFITRRD 129
+ + L FN I +F +K F +TGL + P +++ + ++ F + I R
Sbjct: 702 R-HELWFNLEGRIHKFGMKDFALITGLNCGELPAIDMSKIQKGKFNKRYFGGEKTIRRTK 761
Query: 130 IERTFKALYNEEDSLKEKLVNLYILEAFLIPKQQHNHINLLHLDILDNEEIFKGYPWGML 189
+ F + + K+ LYILE F++ KQ IN + ++D++E F YPWG +
Sbjct: 762 LHEVFTEMDKGRNKDVVKMAKLYILEMFILGKQLRTGINHEYTLLIDDKEQFDSYPWGRI 821
Query: 190 SYILTYQFLKSIL 203
SY +T F+K +
Sbjct: 822 SYEITIDFVKKAI 832
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022132727.1 | 1.3e-17 | 31.09 | uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132728.1 uncha... | [more] |
KAA0047596.1 | 6.6e-17 | 27.86 | protein Ycf2-like [Cucumis melo var. makuwa] | [more] |
XP_038883715.1 | 8.6e-17 | 30.57 | uncharacterized protein LOC120074618 isoform X1 [Benincasa hispida] | [more] |
XP_038883719.1 | 8.6e-17 | 30.57 | uncharacterized protein LOC120074618 isoform X5 [Benincasa hispida] | [more] |
XP_024031030.1 | 8.6e-17 | 31.05 | uncharacterized protein LOC21394043 [Morus notabilis] >XP_024031031.1 uncharacte... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1BX50 | 6.4e-18 | 31.09 | uncharacterized protein LOC111005524 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A5A7U047 | 3.2e-17 | 27.86 | Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00... | [more] |
W9SF50 | 4.1e-17 | 31.05 | DUF1985 domain-containing protein OS=Morus notabilis OX=981085 GN=L484_010758 PE... | [more] |
A0A0A0KI50 | 7.1e-17 | 30.00 | TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G489950 PE=4 ... | [more] |
A0A5D3CNI7 | 1.2e-16 | 29.53 | TF-B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
Match Name | E-value | Identity | Description | |