MELO3C032479.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C032479.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionFolate gamma-glutamyl hydrolase
Locationchr07: 3920935 .. 3923432 (-)
RNA-Seq ExpressionMELO3C032479.jh1
SyntenyMELO3C032479.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCCGATCCAAATAGGTCTCGTTAAAGCCACCACCTACTCACAATAATCCTCTCTCTAACAACATTTTCTTACCTTCTGAACTCGAGAGATCAGATCATAACCTCCAATTGCGTACTTGTGTACCAAAGTCAATCCCTCGCTCAACTACCGACCGGTGATCGGAATCCTTTCTCATCCTGGCGATGGCGCCTCCGGTAGGCACAGTAATGCCAGGAACGCGTCCTACATTGCGGCCTCGTACGTCAAGTTCGTCGAATCCGCGTGCGCTAGAGTTATTCCTCTTATCTATAACGACCCAACTGAAGTTGTGGAAGTGGTAATAAGAAACAAGTAATGAAATGAAACCACTATATATGAATGTGAATAAATTTTTAAGAAGAATATAATTAGTCCTTAATTTGTTGGCAGAAAATGGGTTTGGTGAATGGAGTGATTCTGACAGGAGGGAAGGTTAGAGATGGATCATATTATTCATCATATCTTTGTGTTTGAATAGAATGATGATGATAATACTATTTATATCATTGGGTGGCAGAAGGAATGAGGGAGGGGATCATGTCCCTTTATATGGCATTTCCTTAGGTTTTCAGCTGATCATTACCAAAATGGTTATCCAGGTAATTAATTTAGTTTATTTAAGTAAGAAGAAAACAACTATGACTTGGGGTGTAATTAGGTTTCATTTTCTTCTAGGCTCCACATGTTTGTAATGTGACTAAAAAGTACTCTTAATTCTTTCTTTTCTTGTTCCAATGCTAATATTTAAAAATAGCTCTCAAAAAATAATTAATTTGCATTTTTTTCTTATTAAAGTAATAAAATTTTGGAAAATCGTTCAAAAATGTCAAATTTGACTAAATATTTACAAAATATATTAAAATTTTAAATTTCATCCATAATAGACATTGATACACACTCCTATGTTTCTATCGATCATATTAATAAACAGTAATACAAGTTGATATCTATCATTTATAGAATCAAAAAATCTATTATATGTCGTAAATTTTTTTATTTATTTTACTATATTTAAAAATATTCTTAAAATTTCTAGATTAATAGTGTTTTTTTTTATATATAAGGGTGTTTACATTATTATAAATAGAAAAAAAAACTATTTACAAGATATAACAAAAACTAAACAAGTAATTTACCTAATTTTGAAACACACGATCGAGATCTCTCTCTTTACATCAATACGTGGGTGAGATCGAATCTCTAAGTTCAAAATCGAAAGTGTGCCTAGCCTTTTCGATGCAGATTGAACTGTATTTGTTTTAGGACCTGGTTTCTCTATAACCTCCTAACTGTTTTTTTCAAATTAATTTGTGTTTTCCTATCTTTTTCTTATTAGTTAAATTAATTTATTTTCTATATAGAATATAGTTTTGTTTTTGTTTATAGGTACATGACATTATTGTGCCACGTGACATTTTTGTGCCACTTAATGCCACACGTCTTCCATCTACCTTGAAATTTAACAACTTTGCAAATATGAGAGGAACCGTCTTCGAAAGGTACATTTACCATCGTATTTTTCAATAACATACGCAGTCTCATCTCGATATTTATTGTACGTATTTTAAAGTCAGTTGAGCAATGTTTACCCACTTCTTCTCATTAAATTTTAGATTCGCAAATACAATATTTCTTATAGTTTCGCTTATGAAAATAACAACATGGAGTTTCTATATATGTGTCATTTCTTTTGGTAGAGTTCCACACTCCTTACGAATAAGGGCGGCTAAAGATTGTATTACATGGGAAGACCATAAAGTGAGTTTCGAACACTTTTTTGTTATGTCTCGAGCTTGGTTTTTAGTCCTATAATTTTCACATTTCTACGATTCTGTTTTATTTCATTTTTTGTTTTGAAAATTTAGCATGTTTTCTTTGTATGTACTCTTATAATGATTTGCATATTTATTAAGTACATTAGTTGAATTCTTTATCAAATTCCAAAAGTAAAAACAACCTTTCGAAAGATACTTAATTTTAGTTTTCAAAATTTAGCTCTCATAACAGAAGTTGAGGTAAGAGTAGTATTTGTAAGCTTAATTTTTAAACAAAATATTTACCAAATGAACTTACACTTTTTACTTTAGATTTTTATTTTTAGTCATCAGTGTATCACAAGTTACTGTAACATTTCACCTGAAACATTTGAACAAGATGAAAGGTTATCTAGCTTTGTCAAAGATCAGTAAAGGAACCACCAGCAGAAAAGGTTCTTGAGAAACTAATCTACAATTACAGCCCTATTTACAATGGCAAAAAAGGGTAACAGTAATACCATTTTCTTTTTACTTTTTTAACCTTCCCCTTTTCTTAATTTTGGTCTTTGTTAATATACTTCCATGTATATGTGAATGCAGGAAGGGATATGATCAAGTTTATCTTTTTGAGTAGATGGGTTACTTTTGTTACCCTTTGGAATTTCCATCTATGCTTTCTTGAGGAGTAATGTTGTAATAACTTCATTATCTAAATAA

mRNA sequence

ATGGCGGCCGATCCAAATAGGTCTCATCAGATCATAACCTCCAATTGCGTACTTGTGTACCAAAGTCAATCCCTCGCTCAACTACCGACCGGTGATCGGAATCCTTTCTCATCCTGGCGATGGCGCCTCCGGTAGGCACAGTAATGCCAGGAACGCGTCCTACATTGCGGCCTCGTACGTCAAGTTCGTCGAATCCGCGTGCGCTAGAGTTATTCCTCTTATCTATAACGACCCAACTGAAGTTGTGGAAGTGAAAATGGGTTTGGTGAATGGAGTGATTCTGACAGGAGGGAAGCTGATCATTACCAAAATGGTTATCCAGGTACATGACATTATTGTGCCACGTGACATTTTTGTGCCACTTAATGCCACACGTCTTCCATCTACCTTGAAATTTAACAACTTTGCAAATATGAGAGGAACCGTCTTCGAAAGAGTTCCACACTCCTTACGAATAAGGGCGGCTAAAGATTGTATTACATGGGAAGACCATAAAGTGAGTTTCGAACACTTTTTTGTTATGTCTCGAGCTTGTCATCAGTGTATCACAAGTTACTGTAACATTTCACCTGAAACATTTGAACAAGATGAAAGGTTATCTAGCTTTGTCAAAGATCAGTAAAGGAACCACCAGCAGAAAAGGAAGGGATATGATCAAGTTTATCTTTTTGAGTAGATGGGTTACTTTTGTTACCCTTTGGAATTTCCATCTATGCTTTCTTGAGGAGTAATGTTGTAATAACTTCATTATCTAAATAA

Coding sequence (CDS)

ATGGGTTTGGTGAATGGAGTGATTCTGACAGGAGGGAAGCTGATCATTACCAAAATGGTTATCCAGGTACATGACATTATTGTGCCACGTGACATTTTTGTGCCACTTAATGCCACACGTCTTCCATCTACCTTGAAATTTAACAACTTTGCAAATATGAGAGGAACCGTCTTCGAAAGAGTTCCACACTCCTTACGAATAAGGGCGGCTAAAGATTGTATTACATGGGAAGACCATAAAGTGAGTTTCGAACACTTTTTTGTTATGTCTCGAGCTTGTCATCAGTGTATCACAAGTTACTGTAACATTTCACCTGAAACATTTGAACAAGATGAAAGGTTATCTAGCTTTGTCAAAGATCAGTAA

Protein sequence

MGLVNGVILTGGKLIITKMVIQVHDIIVPRDIFVPLNATRLPSTLKFNNFANMRGTVFERVPHSLRIRAAKDCITWEDHKVSFEHFFVMSRACHQCITSYCNISPETFEQDERLSSFVKDQ
Homology
BLAST of MELO3C032479.jh1 vs. NCBI nr
Match: XP_011654039.1 (gamma-glutamyl hydrolase 2 [Cucumis sativus] >KGN55059.1 hypothetical protein Csa_011933 [Cucumis sativus])

HSP 1 Score: 102 bits (255), Expect = 3.11e-23
Identity = 69/155 (44.52%), Postives = 78/155 (50.32%), Query Frame = 0

Query: 1   MGLVNGVILTGGKL------------------------------------IITKMVIQVH 60
           MGLVNGVI TGG++                                    II+ MV Q +
Sbjct: 124 MGLVNGVIFTGGRVRDGLYYSVAEKIFKQILSRNEDGDHVPLYGISLGFQIISAMVSQRY 183

Query: 61  DIIVPRDIFVPLNATRLPSTLKFNNFANMRGTVFERVPHSLRIRAAKDCITWEDHKVSFE 119
            IIVP       NA+R PS LKFN+FAN+RGTVFERVP SLRIRA +DCITWEDH     
Sbjct: 184 GIIVP------FNASRFPSALKFNDFANIRGTVFERVPLSLRIRATEDCITWEDHGYG-- 243

BLAST of MELO3C032479.jh1 vs. NCBI nr
Match: XP_038899600.1 (gamma-glutamyl hydrolase 2-like [Benincasa hispida])

HSP 1 Score: 102 bits (254), Expect = 5.11e-23
Identity = 68/149 (45.64%), Postives = 80/149 (53.69%), Query Frame = 0

Query: 1   MGLVNGVILTGGKL-----------IITKMV-----------------IQVHDIIVPR-- 60
           +GLVNGVI TGG++           I  K++                  Q+   +V +  
Sbjct: 137 LGLVNGVIFTGGRVRDGLYYSVAEKIFQKVLSRNEAGDHVPLYGISLGFQLISTMVGKNF 196

Query: 61  DIFVPLNATRLPSTLKFNNFANMRGTVFERVPHSLRIRAAKDCITWEDHKVSFEHFFVMS 119
           DI  P NATR PS LKFN+FAN+RGTVFERVP SLRIRA KDCITWEDHK          
Sbjct: 197 DIIEPFNATRFPSALKFNDFANIRGTVFERVPLSLRIRATKDCITWEDHKYG-------- 256

BLAST of MELO3C032479.jh1 vs. NCBI nr
Match: XP_031739802.1 (gamma-glutamyl hydrolase 2 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 1.46e-21
Identity = 68/155 (43.87%), Postives = 78/155 (50.32%), Query Frame = 0

Query: 1   MGLVNGVILTGGKL------------------------------------IITKMVIQVH 60
           MGLVNGVI TGG++                                    II+ MV Q +
Sbjct: 141 MGLVNGVIFTGGRVRDGLYYSVAEKIFQQILSRNEAGDYVPLYGISLGFQIISAMVSQRN 200

Query: 61  DIIVPRDIFVPLNATRLPSTLKFNNFANMRGTVFERVPHSLRIRAAKDCITWEDHKVSFE 119
           DII   + F   NATR PS LKFN+FAN+RGTV +RVP SLRIR  KDCITWE+HK    
Sbjct: 201 DII---ETF---NATRFPSALKFNDFANIRGTVIQRVPLSLRIRTTKDCITWENHKYG-- 260

BLAST of MELO3C032479.jh1 vs. NCBI nr
Match: XP_022136626.1 (gamma-glutamyl hydrolase 1-like [Momordica charantia])

HSP 1 Score: 69.7 bits (169), Expect = 4.50e-11
Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 0

Query: 37  NATRLPSTLKFNNFANMRGTVFERVPHSLRIRAAKDCITWEDHKVSFEHFFVMSRACHQC 96
           NATR PSTL+FN+ AN++GTV +R+P  LR R  +DCI W+DH+                
Sbjct: 196 NATRSPSTLQFNDNANIQGTVIQRIPLYLRKRLTQDCIAWQDHRYG-------------- 255

Query: 97  ITSYCNISPETFEQDERLSSFVK 119
                 ISP+TF ++E LSSF +
Sbjct: 256 ------ISPQTFGENEGLSSFFQ 258

BLAST of MELO3C032479.jh1 vs. NCBI nr
Match: XP_004146022.1 (gamma-glutamyl hydrolase 2 [Cucumis sativus] >KGN55057.1 hypothetical protein Csa_012995 [Cucumis sativus])

HSP 1 Score: 61.6 bits (148), Expect = 3.56e-08
Identity = 33/90 (36.67%), Postives = 49/90 (54.44%), Query Frame = 0

Query: 30  RDIFVPLNATRLPSTLKFNNFANMRGTVFERVPHSLRIRAAKDCITWEDHKVSFEHFFVM 89
           R+I  P NA+ + STL+F +  N++GTVF+R PH L  + + DCI +++H          
Sbjct: 203 RNILEPFNASYMASTLQFVDNVNIQGTVFQRFPHYLLEKLSTDCIVFQNH---------- 262

Query: 90  SRACHQCITSYCNISPETFEQDERLSSFVK 119
                     Y  ISPETF Q+E L+ F +
Sbjct: 263 ----------YFGISPETFAQNEELTKFFQ 272

BLAST of MELO3C032479.jh1 vs. ExPASy Swiss-Prot
Match: O65355 (Gamma-glutamyl hydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=GGH2 PE=1 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 8.0e-05
Identity = 43/148 (29.05%), Postives = 63/148 (42.57%), Query Frame = 0

Query: 3   LVNGVILTGG-----------KLIITKMVIQVHD--------------------IIVPRD 62
           LVNGVILTGG           K I  K V++ +D                    I   RD
Sbjct: 112 LVNGVILTGGWAKEGLYFEIVKKIFNK-VLERNDAGEHFPIYAICLGFELLTMIISQNRD 171

Query: 63  IFVPLNATRLPSTLKFNNFANMRGTVFERVPHSLRIRAAKDCITWEDHKVSFEHFFVMSR 120
           IF  ++A    S+L+F    N++GT+F+R P  L  +   DC+  ++H+           
Sbjct: 172 IFEKMDARNSASSLQFVENVNIQGTIFQRFPPELLKKLGTDCLVMQNHRF---------- 231

BLAST of MELO3C032479.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L214 (Folate gamma-glutamyl hydrolase OS=Cucumis sativus OX=3659 GN=Csa_4G627100 PE=3 SV=1)

HSP 1 Score: 102 bits (255), Expect = 1.51e-23
Identity = 69/155 (44.52%), Postives = 78/155 (50.32%), Query Frame = 0

Query: 1   MGLVNGVILTGGKL------------------------------------IITKMVIQVH 60
           MGLVNGVI TGG++                                    II+ MV Q +
Sbjct: 124 MGLVNGVIFTGGRVRDGLYYSVAEKIFKQILSRNEDGDHVPLYGISLGFQIISAMVSQRY 183

Query: 61  DIIVPRDIFVPLNATRLPSTLKFNNFANMRGTVFERVPHSLRIRAAKDCITWEDHKVSFE 119
            IIVP       NA+R PS LKFN+FAN+RGTVFERVP SLRIRA +DCITWEDH     
Sbjct: 184 GIIVP------FNASRFPSALKFNDFANIRGTVFERVPLSLRIRATEDCITWEDHGYG-- 243

BLAST of MELO3C032479.jh1 vs. ExPASy TrEMBL
Match: A0A6J1C412 (Folate gamma-glutamyl hydrolase OS=Momordica charantia OX=3673 GN=LOC111008284 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.18e-11
Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 0

Query: 37  NATRLPSTLKFNNFANMRGTVFERVPHSLRIRAAKDCITWEDHKVSFEHFFVMSRACHQC 96
           NATR PSTL+FN+ AN++GTV +R+P  LR R  +DCI W+DH+                
Sbjct: 196 NATRSPSTLQFNDNANIQGTVIQRIPLYLRKRLTQDCIAWQDHRYG-------------- 255

Query: 97  ITSYCNISPETFEQDERLSSFVK 119
                 ISP+TF ++E LSSF +
Sbjct: 256 ------ISPQTFGENEGLSSFFQ 258

BLAST of MELO3C032479.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L398 (Folate gamma-glutamyl hydrolase OS=Cucumis sativus OX=3659 GN=Csa_4G626100 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.72e-08
Identity = 33/90 (36.67%), Postives = 49/90 (54.44%), Query Frame = 0

Query: 30  RDIFVPLNATRLPSTLKFNNFANMRGTVFERVPHSLRIRAAKDCITWEDHKVSFEHFFVM 89
           R+I  P NA+ + STL+F +  N++GTVF+R PH L  + + DCI +++H          
Sbjct: 203 RNILEPFNASYMASTLQFVDNVNIQGTVFQRFPHYLLEKLSTDCIVFQNH---------- 262

Query: 90  SRACHQCITSYCNISPETFEQDERLSSFVK 119
                     Y  ISPETF Q+E L+ F +
Sbjct: 263 ----------YFGISPETFAQNEELTKFFQ 272

BLAST of MELO3C032479.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CKF7 (Folate gamma-glutamyl hydrolase OS=Cucumis melo OX=3656 GN=LOC103501819 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.41e-06
Identity = 31/90 (34.44%), Postives = 46/90 (51.11%), Query Frame = 0

Query: 30  RDIFVPLNATRLPSTLKFNNFANMRGTVFERVPHSLRIRAAKDCITWEDHKVSFEHFFVM 89
           R+I  P NA+ + STL+F +  N++GTVF+R PH L  + + DCI +++H          
Sbjct: 192 RNILEPFNASYMASTLQFVDNVNIQGTVFQRFPHYLLEKLSTDCIVFQNHLYG------- 251

Query: 90  SRACHQCITSYCNISPETFEQDERLSSFVK 119
                        ISPE F  +E LS F +
Sbjct: 252 -------------ISPERFAHNEELSRFFQ 261

BLAST of MELO3C032479.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VHS8 (Folate gamma-glutamyl hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00920 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.87e-06
Identity = 31/90 (34.44%), Postives = 46/90 (51.11%), Query Frame = 0

Query: 30  RDIFVPLNATRLPSTLKFNNFANMRGTVFERVPHSLRIRAAKDCITWEDHKVSFEHFFVM 89
           R+I  P NA+ + STL+F +  N++GTVF+R PH L  + + DCI +++H          
Sbjct: 192 RNILEPFNASYMASTLQFVDNVNIQGTVFQRFPHYLLEKLSTDCIVFQNHLYG------- 251

Query: 90  SRACHQCITSYCNISPETFEQDERLSSFVK 119
                        ISPE F  +E LS F +
Sbjct: 252 -------------ISPERFAHNEELSRFFQ 261

BLAST of MELO3C032479.jh1 vs. TAIR 10
Match: AT1G78680.1 (gamma-glutamyl hydrolase 2 )

HSP 1 Score: 48.1 bits (113), Expect = 5.7e-06
Identity = 43/148 (29.05%), Postives = 63/148 (42.57%), Query Frame = 0

Query: 3   LVNGVILTGG-----------KLIITKMVIQVHD--------------------IIVPRD 62
           LVNGVILTGG           K I  K V++ +D                    I   RD
Sbjct: 112 LVNGVILTGGWAKEGLYFEIVKKIFNK-VLERNDAGEHFPIYAICLGFELLTMIISQNRD 171

Query: 63  IFVPLNATRLPSTLKFNNFANMRGTVFERVPHSLRIRAAKDCITWEDHKVSFEHFFVMSR 120
           IF  ++A    S+L+F    N++GT+F+R P  L  +   DC+  ++H+           
Sbjct: 172 IFEKMDARNSASSLQFVENVNIQGTIFQRFPPELLKKLGTDCLVMQNHRF---------- 231

BLAST of MELO3C032479.jh1 vs. TAIR 10
Match: AT1G78680.2 (gamma-glutamyl hydrolase 2 )

HSP 1 Score: 48.1 bits (113), Expect = 5.7e-06
Identity = 43/148 (29.05%), Postives = 63/148 (42.57%), Query Frame = 0

Query: 3   LVNGVILTGG-----------KLIITKMVIQVHD--------------------IIVPRD 62
           LVNGVILTGG           K I  K V++ +D                    I   RD
Sbjct: 112 LVNGVILTGGWAKEGLYFEIVKKIFNK-VLERNDAGEHFPIYAICLGFELLTMIISQNRD 171

Query: 63  IFVPLNATRLPSTLKFNNFANMRGTVFERVPHSLRIRAAKDCITWEDHKVSFEHFFVMSR 120
           IF  ++A    S+L+F    N++GT+F+R P  L  +   DC+  ++H+           
Sbjct: 172 IFEKMDARNSASSLQFVENVNIQGTIFQRFPPELLKKLGTDCLVMQNHRF---------- 231

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011654039.13.11e-2344.52gamma-glutamyl hydrolase 2 [Cucumis sativus] >KGN55059.1 hypothetical protein Cs... [more]
XP_038899600.15.11e-2345.64gamma-glutamyl hydrolase 2-like [Benincasa hispida][more]
XP_031739802.11.46e-2143.87gamma-glutamyl hydrolase 2 [Cucumis sativus][more]
XP_022136626.14.50e-1143.37gamma-glutamyl hydrolase 1-like [Momordica charantia][more]
XP_004146022.13.56e-0836.67gamma-glutamyl hydrolase 2 [Cucumis sativus] >KGN55057.1 hypothetical protein Cs... [more]
Match NameE-valueIdentityDescription
O653558.0e-0529.05Gamma-glutamyl hydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=GGH2 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0L2141.51e-2344.52Folate gamma-glutamyl hydrolase OS=Cucumis sativus OX=3659 GN=Csa_4G627100 PE=3 ... [more]
A0A6J1C4122.18e-1143.37Folate gamma-glutamyl hydrolase OS=Momordica charantia OX=3673 GN=LOC111008284 P... [more]
A0A0A0L3981.72e-0836.67Folate gamma-glutamyl hydrolase OS=Cucumis sativus OX=3659 GN=Csa_4G626100 PE=3 ... [more]
A0A1S3CKF73.41e-0634.44Folate gamma-glutamyl hydrolase OS=Cucumis melo OX=3656 GN=LOC103501819 PE=3 SV=... [more]
A0A5A7VHS83.87e-0634.44Folate gamma-glutamyl hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
Match NameE-valueIdentityDescription
AT1G78680.15.7e-0629.05gamma-glutamyl hydrolase 2 [more]
AT1G78680.25.7e-0629.05gamma-glutamyl hydrolase 2 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032479.jh1.t1MELO3C032479.jh1.t1mRNA