MELO3C032446 (gene) Melon (DHL92) v4

Overview
NameMELO3C032446
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionGag/pol protein
Locationchr07: 11110760 .. 11111077 (+)
RNA-Seq ExpressionMELO3C032446
SyntenyMELO3C032446
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGTACAGGCGTGCTATGCCGCCTGCCAATCTTGTGCAGGCGCAAAGAGACTTATTTGGGGCTCATACATATGAGCAGGTGGATCGCCAAGGCTCCTACCACACAGAGTGGACAAAGCTGGCTCGCAATGCTGATGCTGGAGTTGGCATTTTCAACTGAGCTTTTGAGCTGCCTACCAATTTGGTCGGTTTTCTTTCTCTGCTTCAATTGGGTGCAAATTTCCTACTTGATTTTGCTTGCCTATTTCAAAAGTTTGTAGGTTTTCCTTTTTGTATCACAGTTTGGGCAATCTTCGATGCTTCTTAGGGGAGTAGGTAG

mRNA sequence

ACGTACAGGCGTGCTATGCCGCCTGCCAATCTTGTGCAGGCGCAAAGAGACTTATTTGGGGCTCATACATATGAGCAGGTGGATCGCCAAGGCTCCTACCACACAGAGTGGACAAAGCTGGCTCGCAATGCTGATGCTGGAGTTGGCATTTTCAACTGAGCTTTTGAGCTGCCTACCAATTTGGTCGGTTTTCTTTCTCTGCTTCAATTGGGTGCAAATTTCCTACTTGATTTTGCTTGCCTATTTCAAAAGTTTGTAGGTTTTCCTTTTTGTATCACAGTTTGGGCAATCTTCGATGCTTCTTAGGGGAGTAGGTAG

Coding sequence (CDS)

ATGAGCAGGTGGATCGCCAAGGCTCCTACCACACAGAGTGGACAAAGCTGGCTCGCAATGCTGATGCTGGAGTTGGCATTTTCAACTGAGCTTTTGAGCTGCCTACCAATTTGGTCGGTTTTCTTTCTCTGCTTCAATTGGGTGCAAATTTCCTACTTGATTTTGCTTGCCTATTTCAAAAGTTTGTAG

Protein sequence

MSRWIAKAPTTQSGQSWLAMLMLELAFSTELLSCLPIWSVFFLCFNWVQISYLILLAYFKSL
Homology
[Close]
BLAST of MELO3C032446 vs. NCBI nr
Match: TYJ96904.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 54.7 bits (130), Expect = 3.3e-04
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 0 

Query: 9   PTTQSGQSWLAMLMLELAFSTELLSCLPI 38
           PTT+ GQSWLAML+LELAFSTELLSCLPI
Sbjct: 163 PTTRGGQSWLAMLILELAFSTELLSCLPI 191

[Close]
BLAST of MELO3C032446 vs. ExPASy TrEMBL
Match: A0A5D3BD21 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00030 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-04
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 0 

Query: 9   PTTQSGQSWLAMLMLELAFSTELLSCLPI 38
           PTT+ GQSWLAML+LELAFSTELLSCLPI
Sbjct: 163 PTTRGGQSWLAMLILELAFSTELLSCLPI 191

The following BLAST results are available for this feature:
BLAST of MELO3C032446 vs. NCBI nr
Match NameE-valueIdentityDescription
TYJ96904.13.3e-0489.66gag/pol protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C032446 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C032446 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BD211.6e-0489.66Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G0003... [more]
BLAST of MELO3C032446 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032446.1MELO3C032446.1mRNA