MELO3C032443.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C032443.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	CACTA en-spm transposon protein
Location	chr07: 9971826 .. 9972682 (+)
RNA-Seq Expression	MELO3C032443.jh1
Synteny	MELO3C032443.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTGGGATGACTATCCTAAAGTTATGGATGCCTTTTTTTGTTTTGAATTTGTTTGTATTTCTAAAGGTCTGAAGGGGTGGTAGTAGGGTAGCTTGTAAGGTAGCATTGTTGGAAGAGGTGGGTAGGATACAAATATTGAAGTTATTTATGGTTAATTAGGTTGTGGTGACTATCTTGCAAGTATGGTAACCTGTGTAGTTTGAAGTTAGTTTTAGTGAAAATTTTAGGAGATTGTATATTCAAGAGAGTAAGTTTAGGATGTGAGAGGAGAGGAATATGCTTCTAATCAAACCTATTTATGTTTTAGGGACTAAAATGATGGACAATGGTTGGATGAAACTTAGGAATAAGTTTTCCCTTGAGTATAAAGAGGGAGTGACCAAATTTTTAGAAGTTGTCAAGTTTCACTTTGATGCTTACAGACGAATAAACTATCCATGCAAGAGATGTATGAACTCAAATTGGAACTCACTAGAGGGTGTGGAACAATATCTACTGACTATTGGAATATCCCCCTACTACACAGAATGAGTATATCATGGAGAGTCAGTTAGCTTTAGAGGTACAGAAAACTTTGAGGAAGGAACGAGTAGTAATCCTTTTGATGAAGGAACTATTAGTAGGGAATTTGATGAAGAAGATGATATGTTTGGTATGTTGAATGATTTAAAAGTCTCGATTGAACATGAAGAAGAAACGAAGGAAGGTCATTAGAGGATCAAATGCCGAGGAATATTGAGGTAGATATAGATGAAGATACAACAAACATATTTCAGGACTTATTGAATGAAGCATGTAATGAGTTGTACCCCATTTGTTCTGAACTTTCCTCATTGAATTTTTTTGTTAAGTTGA

mRNA sequence

TATTTGGGATGACTATCCTAAAGTTATGGGACTAAAATGATGGACAATGGTTGGATGAAACTTAGGAATAAGTTTTCCCTTGAGTATAAAGAGGGAGTGACCAAATTTTTAGAAGTTGTCAAGTTTCACTTTGATGCTTACAGACGAATAAACTATCCATGCAAGAGATGTATGAACTCAAATTGGAACTCACTAGAGGGTGTGGAACAATATCTACTGACTATTGGAATATCCCCCTACTACACAGAATGAGTATATCATGGAGAGTCAGTTAGCTTTAGAGGTACAGAAAACTTTGAGGAAGGAACGAGTAGTAATCCTTTTGATGAAGGAACTATTAGTAGGGAATTTGATGAAGAAGATGATATGTTTGGTATGTTGAATGATTTAAAAGTCTCGATTGAACATGAAGAAGAAACGAAGGAAGGTCATTAGAGGATCAAATGCCGAGGAATATTGAGGTAGATATAGATGAAGATACAACAAACATATTTCAGGACTTATTGAATGAAGCATGTAATGAGTTGTACCCCATTTGTTCTGAACTTTCCTCATTGAATTTTTTTGTTAAGTTGA

Coding sequence (CDS)

ATGATGGACAATGGTTGGATGAAACTTAGGAATAAGTTTTCCCTTGAGTATAAAGAGGGAGTGACCAAATTTTTAGAAGTTGTCAAGTTTCACTTTGATGCTTACAGACGAATAAACTATCCATGCAAGAGATGTATGAACTCAAATTGGAACTCACTAGAGGGTGTGGAACAATATCTACTGACTATTGGAATATCCCCCTACTACACAGAATGA

Protein sequence

MMDNGWMKLRNKFSLEYKEGVTKFLEVVKFHFDAYRRINYPCKRCMNSNWNSLEGVEQYLLTIGISPYYTE

Homology

[Close]

BLAST of MELO3C032443.jh1 vs. NCBI nr
Match: KAA0038080.1 (uncharacterized protein E6C27_scaffold36G002950 [Cucumis melo var. makuwa])

HSP 1 Score: 129 bits (324), Expect = 9.70e-37
Identity = 59/70 (84.29%), Postives = 62/70 (88.57%), Query Frame = 0


Query: 2  MDNGWMKLRNKFSLEYKEGVTKFLEVVKFHFDAYRRINYPCKRCMNSNWNSLEGVEQYLL 61
          MD GWMKLRNKFSLEY+EGVT+FLEV KF  DAYRRI  PCKRCMNSNWNSLEGVE+ LL
Sbjct: 1  MDKGWMKLRNKFSLEYREGVTQFLEVAKFLVDAYRRIRCPCKRCMNSNWNSLEGVERRLL 60

Query: 62 TIGISPYYTE 71
          TIG SPYYTE
Sbjct: 61 TIGTSPYYTE 70

[Close]

BLAST of MELO3C032443.jh1 vs. NCBI nr
Match: TYJ99928.1 (uncharacterized protein E5676_scaffold701G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (306), Expect = 5.40e-32
Identity = 53/71 (74.65%), Postives = 61/71 (85.92%), Query Frame = 0


Query: 1   MMDNGWMKLRNKFSLEYKEGVTKFLEVVKFHFDAYRRINYPCKRCMNSNWNSLEGVEQYL 60
           +MD GWMKLRNK SLEY+ GVT+FLE  KFH DAY R+  PCKRC+N NW+SLEGVE++L
Sbjct: 57  VMDKGWMKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHL 116

Query: 61  LTIGISPYYTE 71
           LTIGISPYYTE
Sbjct: 117 LTIGISPYYTE 127

[Close]

BLAST of MELO3C032443.jh1 vs. NCBI nr
Match: TYK16353.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (305), Expect = 5.82e-31
Identity = 53/70 (75.71%), Postives = 60/70 (85.71%), Query Frame = 0


Query: 2  MDNGWMKLRNKFSLEYKEGVTKFLEVVKFHFDAYRRINYPCKRCMNSNWNSLEGVEQYLL 61
          MD GWMKLRNK SLEY+ GVT+FLE  KFH DAY R+  PCKRC+N NW+SLEGVE++LL
Sbjct: 1  MDKGWMKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLL 60

Query: 62 TIGISPYYTE 71
          TIGISPYYTE
Sbjct: 61 TIGISPYYTE 70

[Close]

BLAST of MELO3C032443.jh1 vs. NCBI nr
Match: TYJ95864.1 (uncharacterized protein E5676_scaffold110G001580 [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (306), Expect = 7.51e-31
Identity = 53/71 (74.65%), Postives = 61/71 (85.92%), Query Frame = 0


Query: 1   MMDNGWMKLRNKFSLEYKEGVTKFLEVVKFHFDAYRRINYPCKRCMNSNWNSLEGVEQYL 60
           +MD GWMKLRNK SLEY+ GVT+FLE  KFH DAY R+  PCKRC+N NW+SLEGVE++L
Sbjct: 51  VMDKGWMKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHL 110

Query: 61  LTIGISPYYTE 71
           LTIGISPYYTE
Sbjct: 111 LTIGISPYYTE 121

[Close]

BLAST of MELO3C032443.jh1 vs. NCBI nr
Match: TYK28867.1 (uncharacterized protein E5676_scaffold381G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (306), Expect = 2.65e-30
Identity = 53/71 (74.65%), Postives = 61/71 (85.92%), Query Frame = 0


Query: 1   MMDNGWMKLRNKFSLEYKEGVTKFLEVVKFHFDAYRRINYPCKRCMNSNWNSLEGVEQYL 60
           +MD GWMKLRNK SLEY+ GVT+FLE  KFH DAY R+  PCKRC+N NW+SLEGVE++L
Sbjct: 129 VMDKGWMKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHL 188

Query: 61  LTIGISPYYTE 71
           LTIGISPYYTE
Sbjct: 189 LTIGISPYYTE 199

[Close]

BLAST of MELO3C032443.jh1 vs. ExPASy TrEMBL
Match: A0A5A7T400 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G002950 PE=4 SV=1)

HSP 1 Score: 129 bits (324), Expect = 4.70e-37
Identity = 59/70 (84.29%), Postives = 62/70 (88.57%), Query Frame = 0


Query: 2  MDNGWMKLRNKFSLEYKEGVTKFLEVVKFHFDAYRRINYPCKRCMNSNWNSLEGVEQYLL 61
          MD GWMKLRNKFSLEY+EGVT+FLEV KF  DAYRRI  PCKRCMNSNWNSLEGVE+ LL
Sbjct: 1  MDKGWMKLRNKFSLEYREGVTQFLEVAKFLVDAYRRIRCPCKRCMNSNWNSLEGVERRLL 60

Query: 62 TIGISPYYTE 71
          TIG SPYYTE
Sbjct: 61 TIGTSPYYTE 70

[Close]

BLAST of MELO3C032443.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BP89 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00540 PE=4 SV=1)

HSP 1 Score: 122 bits (306), Expect = 2.61e-32
Identity = 53/71 (74.65%), Postives = 61/71 (85.92%), Query Frame = 0


Query: 1   MMDNGWMKLRNKFSLEYKEGVTKFLEVVKFHFDAYRRINYPCKRCMNSNWNSLEGVEQYL 60
           +MD GWMKLRNK SLEY+ GVT+FLE  KFH DAY R+  PCKRC+N NW+SLEGVE++L
Sbjct: 57  VMDKGWMKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHL 116

Query: 61  LTIGISPYYTE 71
           LTIGISPYYTE
Sbjct: 117 LTIGISPYYTE 127

[Close]

BLAST of MELO3C032443.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CWU5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001370 PE=4 SV=1)

HSP 1 Score: 122 bits (305), Expect = 2.82e-31
Identity = 53/70 (75.71%), Postives = 60/70 (85.71%), Query Frame = 0


Query: 2  MDNGWMKLRNKFSLEYKEGVTKFLEVVKFHFDAYRRINYPCKRCMNSNWNSLEGVEQYLL 61
          MD GWMKLRNK SLEY+ GVT+FLE  KFH DAY R+  PCKRC+N NW+SLEGVE++LL
Sbjct: 1  MDKGWMKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLL 60

Query: 62 TIGISPYYTE 71
          TIGISPYYTE
Sbjct: 61 TIGISPYYTE 70

[Close]

BLAST of MELO3C032443.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BA83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001580 PE=4 SV=1)

HSP 1 Score: 122 bits (306), Expect = 3.64e-31
Identity = 53/71 (74.65%), Postives = 61/71 (85.92%), Query Frame = 0


Query: 1   MMDNGWMKLRNKFSLEYKEGVTKFLEVVKFHFDAYRRINYPCKRCMNSNWNSLEGVEQYL 60
           +MD GWMKLRNK SLEY+ GVT+FLE  KFH DAY R+  PCKRC+N NW+SLEGVE++L
Sbjct: 51  VMDKGWMKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHL 110

Query: 61  LTIGISPYYTE 71
           LTIGISPYYTE
Sbjct: 111 LTIGISPYYTE 121

[Close]

BLAST of MELO3C032443.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DY98 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold381G00070 PE=4 SV=1)

HSP 1 Score: 122 bits (306), Expect = 1.28e-30
Identity = 53/71 (74.65%), Postives = 61/71 (85.92%), Query Frame = 0


Query: 1   MMDNGWMKLRNKFSLEYKEGVTKFLEVVKFHFDAYRRINYPCKRCMNSNWNSLEGVEQYL 60
           +MD GWMKLRNK SLEY+ GVT+FLE  KFH DAY R+  PCKRC+N NW+SLEGVE++L
Sbjct: 129 VMDKGWMKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHL 188

Query: 61  LTIGISPYYTE 71
           LTIGISPYYTE
Sbjct: 189 LTIGISPYYTE 199

The following BLAST results are available for this feature:

BLAST of MELO3C032443.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038080.1	9.70e-37	84.29	uncharacterized protein E6C27_scaffold36G002950 [Cucumis melo var. makuwa]	[more]
TYJ99928.1	5.40e-32	74.65	uncharacterized protein E5676_scaffold701G00540 [Cucumis melo var. makuwa]	[more]
TYK16353.1	5.82e-31	75.71	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYJ95864.1	7.51e-31	74.65	uncharacterized protein E5676_scaffold110G001580 [Cucumis melo var. makuwa]	[more]
TYK28867.1	2.65e-30	74.65	uncharacterized protein E5676_scaffold381G00070 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C032443.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032443.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T400	4.70e-37	84.29	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BP89	2.61e-32	74.65	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3CWU5	2.82e-31	75.71	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3BA83	3.64e-31	74.65	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DY98	1.28e-30	74.65	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of MELO3C032443.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029480	Transposase-associated domain	PFAM	PF13963	Transpos_assoc	coord: 5..70 e-value: 7.4E-13 score: 48.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032443.jh1.t1	MELO3C032443.jh1.t1	mRNA