MELO3C032380.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C032380.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr07: 2191691 .. 2192302 (+)
RNA-Seq ExpressionMELO3C032380.jh1
SyntenyMELO3C032380.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATAGCATGTAACCTGTTGCCTAGCGAATTTCTCAGCGCCAGAGAAGGCGAGATAGGAATGGGGAGATTTATCCATGACAAGACGGGCGAGAGAGATGGGGTTTTTGACGGTGACGAGTCCGGACACCGCTCCGCATCTCCGTTTAGGGCCATCCATGATGCTGGCTTCCATTTCTACGGTTCCGTCCTCGGTGAGGGCAGATCCACGGCCAGAGTTGAACAGGGGATCGTTTTCCAATTCCCTAACCTTCAAGATGGAGAGGCAGATTGTTGGTTAATTAATTAAATAAGAAAAAGATAAACGTGAGTGAGAATGAAATGAAAAGCTTACGACGAGTTCGACGACATCAATGGCAGAATGGTTTGAACGAAGAGCGTGGATGCCAAGATCAAGGCAGCGAGTGAGAAATCTTTTGGCATCGTCCTGACGATGCAATGGGAGATTAGGATCCACGCCAGCCCCGCCATGAACTGCAATGGCCCAACCTCCCATCTTTGAGTTTCTCTTTTTATATATATATAAATTTATCGGTCTCTCTGCCTTATTCGTCACTCGGTGATTGTAATGCCACAAAATAGAGGTGTTTATATAGCATTTCTCCGGAAC

mRNA sequence

ATGAAAATAGCATGTAACCTGTTGCCTAGCGAATTTCTCAGCGCCAGAGAAGGCGAGATAGGAATGGGGAGATTTATCCATGACAAGACGGGCGAGAGAGATGGGGTTTTTGACGGTGACGAGTCCGGACACCGCTCCGCATCTCCGTTTAGGGCCATCCATGATGCTGGCTTCCATTTCTACGGTTCCGTCCTCGGTGAGGGCAGATCCACGGCCAGAGTTGAACAGGGGATCGTTTTCCAATTCCCTAACCTTCAAGATGGAGAGGCAGATTGTTGGTTAATTAATTAAATAAGAAAAAGATAAACGTGAGTGAGAATGAAATGAAAAGCTTACGACGAGTTCGACGACATCAATGGCAGAATGGTTTGAACGAAGAGCGTGGATGCCAAGATCAAGGCAGCGAGTGAGAAATCTTTTGGCATCGTCCTGACGATGCAATGGGAGATTAGGATCCACGCCAGCCCCGCCATGAACTGCAATGGCCCAACCTCCCATCTTTGAGTTTCTCTTTTTATATATATATAAATTTATCGGTCTCTCTGCCTTATTCGTCACTCGGTGATTGTAATGCCACAAAATAGAGGTGTTTATATAGCATTTCTCCGGAAC

Coding sequence (CDS)

ATGAAAATAGCATGTAACCTGTTGCCTAGCGAATTTCTCAGCGCCAGAGAAGGCGAGATAGGAATGGGGAGATTTATCCATGACAAGACGGGCGAGAGAGATGGGGTTTTTGACGGTGACGAGTCCGGACACCGCTCCGCATCTCCGTTTAGGGCCATCCATGATGCTGGCTTCCATTTCTACGGTTCCGTCCTCGGTGAGGGCAGATCCACGGCCAGAGTTGAACAGGGGATCGTTTTCCAATTCCCTAACCTTCAAGATGGAGAGGCAGATTGTTGGTTAATTAATTAA

Protein sequence

MKIACNLLPSEFLSAREGEIGMGRFIHDKTGERDGVFDGDESGHRSASPFRAIHDAGFHFYGSVLGEGRSTARVEQGIVFQFPNLQDGEADCWLIN
Homology
[Close]
BLAST of MELO3C032380.jh1 vs. NCBI nr
Match: ACR35065.1 (unknown [Zea mays])

HSP 1 Score: 68.9 bits (167), Expect = 3.53e-11
Identity = 37/78 (47.44%), Postives = 48/78 (61.54%), Query Frame = 0 

Query: 7   LLPSEFLSAREGEIGMGRFIHDKTGERDGVFDGDESGHRSASPFRAIHDAGFHFYGSVLG 66
           L P E L A EGE+ + R +HD++GE DGV DG ESG R+A    ++HDAG H  G+  G
Sbjct: 210 LFPGEGLGAIEGEVDVRRLLHDESGEGDGVGDGGESGDRAAVQGGSLHDAGLHLDGAGGG 269

Query: 67  EGRSTARVEQGIVFQFPN 84
           E  + A VE   V Q P+
Sbjct: 270 EHGAPAGVEVRAVLQLPH 287

[Close]
BLAST of MELO3C032380.jh1 vs. ExPASy TrEMBL
Match: C4J1L5 (Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.71e-11
Identity = 37/78 (47.44%), Postives = 48/78 (61.54%), Query Frame = 0 

Query: 7   LLPSEFLSAREGEIGMGRFIHDKTGERDGVFDGDESGHRSASPFRAIHDAGFHFYGSVLG 66
           L P E L A EGE+ + R +HD++GE DGV DG ESG R+A    ++HDAG H  G+  G
Sbjct: 210 LFPGEGLGAIEGEVDVRRLLHDESGEGDGVGDGGESGDRAAVQGGSLHDAGLHLDGAGGG 269

Query: 67  EGRSTARVEQGIVFQFPN 84
           E  + A VE   V Q P+
Sbjct: 270 EHGAPAGVEVRAVLQLPH 287

The following BLAST results are available for this feature:
BLAST of MELO3C032380.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
ACR35065.13.53e-1147.44unknown [Zea mays][more]
BLAST of MELO3C032380.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C032380.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
C4J1L51.71e-1147.44Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1[more]
BLAST of MELO3C032380.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032380.jh1.t1MELO3C032380.jh1.t1mRNA