MELO3C032376 (gene) Melon (DHL92) v4

Overview
NameMELO3C032376
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr07: 1940468 .. 1941901 (-)
RNA-Seq ExpressionMELO3C032376
SyntenyMELO3C032376
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAGTTCGTTTGTTTTTTCCTGACGGCTCGCATTCCAATTCTCTGCCATTTTAAATTTGTAAAATGGACACAAGTTTCTGCAAACTCAAAGCAAACATTTACTCCTCCACAGCCTGTACCCAATGCAGATGATATGATAAACAAGCATTGACGATCCCCTGATTTCTTTTATTGTTCTTCTTCTGATCCAATTTAATGCTATTCCATATTTCCACTGTTGTTTTAAACCCCCCATGGACGACCATTTTTGAAGCTAACACACCTTGGAAGTGGAAGAAGAGGGTCTGTGCTTTTCGTTTCTTTTTCTGGGTACATTCACATTTTGGAGTTGTTGGATTATTTTTTTTTTCTGGGTTTGATCTGCATTTTTCTCATTATTTCATTATGAAGCTTTCTGGGTTTTGGGTTTTGTTTTTCGTCCTCCAAACAACTTTATTGCTGCTTTTCTTTCCCGGCTATATAAATGCCTCCTCCAGCTCTGGTAATTTGGAAGTTAATGTTTGTTTTTAACACATTTTTCACTTCTTTATTTGCTTGTCGCTTTGACTTCAATCTTACTGCATTTATGTAAATGTCTTCTTGTTTGTCGCATTTCAATACTTATTACTGTAATGGGTTTTTTCTTTTTGCCCCATACTAGAGTTCCATCGTTTCTTCGGTTTTTTATGTTAAATTAGGATTACTGAAGCTAATCCAGAACAATTCTGTTGTCCTTCTAGTGCTTCTGTTATGTTGCTTTTTTTCATGTCTTTAACAATTTTGGTATGTTCATACTAAAGAATGTCTGCAGGTTAGATCACATATTTAAGCACCCCTGTCTCAGCCATGTTCGAGTCCACGTTGAATAATTTCATCCTTGCGTATTGAAATTCGAAGTTACAGCATCAAGTATATAGGCAGAGACCGAGTTGTTTTGCATATCTGAGTTGTGAATTTGTATGTTATTCTACTGTGACTTTGCATGTTGATTTTGCTGTGTTTTTCTTGACTGCATTCGCAGATATAGCTTTGAACCAACACCATGTTAATGCAAAGAAATGTTTGTCTGACATGCCATTAAACAGGAAACTGAAGGTACTTGCTTTTCAAAGGCTTTTAAATCCAACAAGTCATTTTCACTTGTGTCATAATACATTTCGAGAGAATAGAGTATAGTTCCTTCCAAATTAATTGTTTCTTGATTAATGAGATTGATGACAACTGTCTATGATGAATGGAATTGAATTCCCTTTTTTGGTTCTCAGTTCCAGACTGATGAACATAGTAACCTCGGGAGAAAGAAGGTTCACCCAGGTGATCTAAATCTTGATGACTACCATCCCATTGATCCAGTTCCAAGTTCAAAAACATCAGTCAAACCCGGGCCGATAGAGCACAGCGCTCCTCTCCTCCCTCATATGCCAAATCCTCCACCTCCCAATCAGCCAGGCGGTT

mRNA sequence

TGAGTTCGTTTGTTTTTTCCTGACGGCTCGCATTCCAATTCTCTGCCATTTTAAATTTGTAAAATGGACACAAGTTTCTGCAAACTCAAAGCAAACATTTACTCCTCCACAGCCTGTACCCAATGCAGATGATATGATAAACAAGCATTGACGATCCCCTGATTTCTTTTATTGTTCTTCTTCTGATCCAATTTAATGCTATTCCATATTTCCACTGTTGTTTTAAACCCCCCATGGACGACCATTTTTGAAGCTAACACACCTTGGAAGTGGAAGAAGAGGGTCTGTGCTTTTCGTTTCTTTTTCTGGGTACATTCACATTTTGGAGTTGTTGGATTATTTTTTTTTTCTGGGTTTGATCTGCATTTTTCTCATTATTTCATTATGAAGCTTTCTGGGTTTTGGGTTTTGTTTTTCGTCCTCCAAACAACTTTATTGCTGCTTTTCTTTCCCGGCTATATAAATGCCTCCTCCAGCTCTGTTCCAGACTGATGAACATAGTAACCTCGGGAGAAAGAAGGTTCACCCAGGTGATCTAAATCTTGATGACTACCATCCCATTGATCCAGTTCCAAGTTCAAAAACATCAGTCAAACCCGGGCCGATAGAGCACAGCGCTCCTCTCCTCCCTCATATGCCAAATCCTCCACCTCCCAATCAGCCAGGCGGTT

Coding sequence (CDS)

ATGCTATTCCATATTTCCACTGTTGTTTTAAACCCCCCATGGACGACCATTTTTGAAGCTAACACACCTTGGAAGTGGAAGAAGAGGGTCTGTGCTTTTCGTTTCTTTTTCTGGGTACATTCACATTTTGGAGTTGTTGGATTATTTTTTTTTTCTGGGTTTGATCTGCATTTTTCTCATTATTTCATTATGAAGCTTTCTGGGTTTTGGGTTTTGTTTTTCGTCCTCCAAACAACTTTATTGCTGCTTTTCTTTCCCGGCTATATAAATGCCTCCTCCAGCTCTGTTCCAGACTGA

Protein sequence

MLFHISTVVLNPPWTTIFEANTPWKWKKRVCAFRFFFWVHSHFGVVGLFFFSGFDLHFSHYFIMKLSGFWVLFFVLQTTLLLLFFPGYINASSSSVPD
Homology
[Close]
BLAST of MELO3C032376 vs. NCBI nr
Match: XP_022977124.1 (uncharacterized protein LOC111477287 [Cucurbita maxima])

HSP 1 Score: 70.5 bits (171), Expect = 9.3e-09
Identity = 46/100 (46.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 1  MLFHISTVVLNPPWTTIFE--ANTPWKWKKRVCAFRFF---FWVHSHFGVVGLFFFSGFD 60
          M FHIS+V+LNP WTT FE   ++   +   +  F+F    FW  S              
Sbjct: 1  MPFHISSVLLNPSWTTSFEQGVSSFVSFSGHILVFKFLPSSFWACS-------------- 60

Query: 61 LHFSHYFIMKLSGFWVLFFVLQTTLLLLFFPGYINASSSS 96
            F H+ IMKLSGFWV F VLQTTLLL  FP ++NASS+S
Sbjct: 61 -AFRHFCIMKLSGFWVFFLVLQTTLLLSCFPSHLNASSTS 85

[Close]
BLAST of MELO3C032376 vs. NCBI nr
Match: XP_022937047.1 (uncharacterized protein LOC111443464 [Cucurbita moschata])

HSP 1 Score: 69.3 bits (168), Expect = 2.1e-08
Identity = 50/97 (51.55%), Postives = 57/97 (58.76%), Query Frame = 0 

Query: 1  MLFHISTVVLNPPWTTIFEANTPWKWKKRVCAFRFFFWVHSHFGVVGLFFFSGF--DLHF 60
          M FHIS+V+LNP W T FE        + VC+F  F    S   +V  F  S F     F
Sbjct: 1  MPFHISSVLLNPSWMTSFE--------QGVCSFVSF----SQHILVFKFLASSFWACSAF 60

Query: 61 SHYFIMKLSGFWVLFFVLQTTLLLLFFPGYINASSSS 96
           HY IMKLSG WV F VLQTTLLL  FP Y+NASS+S
Sbjct: 61 PHYCIMKLSGLWVFFLVLQTTLLLSCFPSYLNASSTS 85

[Close]
BLAST of MELO3C032376 vs. NCBI nr
Match: XP_008452636.1 (PREDICTED: uncharacterized protein LOC103493595 [Cucumis melo])

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-06
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 64 MKLSGFWVLFFVLQTTLLLLFFPGYINASSSS 96
          MKLSGFWVLFFVLQTTLLLLFFPGYINASSSS
Sbjct: 1  MKLSGFWVLFFVLQTTLLLLFFPGYINASSSS 32

[Close]
BLAST of MELO3C032376 vs. NCBI nr
Match: XP_038899330.1 (uncharacterized protein LOC120086661 [Benincasa hispida] >XP_038899331.1 uncharacterized protein LOC120086661 [Benincasa hispida] >XP_038899332.1 uncharacterized protein LOC120086661 [Benincasa hispida])

HSP 1 Score: 60.5 bits (145), Expect = 9.6e-06
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0 

Query: 64 MKLSGFWVLFFVLQTTLLLLFFPGYINASSSS 96
          MKLSGFWVLFFVLQTTLL+LFFP YINASSSS
Sbjct: 1  MKLSGFWVLFFVLQTTLLMLFFPSYINASSSS 32

[Close]
BLAST of MELO3C032376 vs. NCBI nr
Match: XP_022154397.1 (uncharacterized protein LOC111021399 isoform X1 [Momordica charantia])

HSP 1 Score: 58.2 bits (139), Expect = 4.8e-05
Identity = 29/35 (82.86%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 64 MKLSGFWVLFFVLQTTLLLLFFPGYINASSSSVPD 99
          MKLSGFWVLFF+LQ +LLLLFFP YINAS SSV D
Sbjct: 1  MKLSGFWVLFFLLQMSLLLLFFPSYINASPSSVAD 35

[Close]
BLAST of MELO3C032376 vs. ExPASy TrEMBL
Match: A0A6J1IQK4 (uncharacterized protein LOC111477287 OS=Cucurbita maxima OX=3661 GN=LOC111477287 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.5e-09
Identity = 46/100 (46.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 1  MLFHISTVVLNPPWTTIFE--ANTPWKWKKRVCAFRFF---FWVHSHFGVVGLFFFSGFD 60
          M FHIS+V+LNP WTT FE   ++   +   +  F+F    FW  S              
Sbjct: 1  MPFHISSVLLNPSWTTSFEQGVSSFVSFSGHILVFKFLPSSFWACS-------------- 60

Query: 61 LHFSHYFIMKLSGFWVLFFVLQTTLLLLFFPGYINASSSS 96
            F H+ IMKLSGFWV F VLQTTLLL  FP ++NASS+S
Sbjct: 61 -AFRHFCIMKLSGFWVFFLVLQTTLLLSCFPSHLNASSTS 85

[Close]
BLAST of MELO3C032376 vs. ExPASy TrEMBL
Match: A0A6J1FA15 (uncharacterized protein LOC111443464 OS=Cucurbita moschata OX=3662 GN=LOC111443464 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.0e-08
Identity = 50/97 (51.55%), Postives = 57/97 (58.76%), Query Frame = 0 

Query: 1  MLFHISTVVLNPPWTTIFEANTPWKWKKRVCAFRFFFWVHSHFGVVGLFFFSGF--DLHF 60
          M FHIS+V+LNP W T FE        + VC+F  F    S   +V  F  S F     F
Sbjct: 1  MPFHISSVLLNPSWMTSFE--------QGVCSFVSF----SQHILVFKFLASSFWACSAF 60

Query: 61 SHYFIMKLSGFWVLFFVLQTTLLLLFFPGYINASSSS 96
           HY IMKLSG WV F VLQTTLLL  FP Y+NASS+S
Sbjct: 61 PHYCIMKLSGLWVFFLVLQTTLLLSCFPSYLNASSTS 85

[Close]
BLAST of MELO3C032376 vs. ExPASy TrEMBL
Match: A0A1S3BV38 (uncharacterized protein LOC103493595 OS=Cucumis melo OX=3656 GN=LOC103493595 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.5e-07
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 64 MKLSGFWVLFFVLQTTLLLLFFPGYINASSSS 96
          MKLSGFWVLFFVLQTTLLLLFFPGYINASSSS
Sbjct: 1  MKLSGFWVLFFVLQTTLLLLFFPGYINASSSS 32

[Close]
BLAST of MELO3C032376 vs. ExPASy TrEMBL
Match: A0A6J1DLK4 (uncharacterized protein LOC111021399 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021399 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.3e-05
Identity = 29/35 (82.86%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 64 MKLSGFWVLFFVLQTTLLLLFFPGYINASSSSVPD 99
          MKLSGFWVLFF+LQ +LLLLFFP YINAS SSV D
Sbjct: 1  MKLSGFWVLFFLLQMSLLLLFFPSYINASPSSVAD 35

[Close]
BLAST of MELO3C032376 vs. ExPASy TrEMBL
Match: A0A0A0L2J3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642400 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.1e-05
Identity = 29/32 (90.62%), Postives = 29/32 (90.62%), Query Frame = 0 

Query: 64 MKLSGFWVLFFVLQTTLLLLFFPGYINASSSS 96
          MKLSGFWV FFVLQTTLLL FFP YINASSSS
Sbjct: 1  MKLSGFWVFFFVLQTTLLLHFFPSYINASSSS 32

The following BLAST results are available for this feature:
BLAST of MELO3C032376 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022977124.19.3e-0946.00uncharacterized protein LOC111477287 [Cucurbita maxima][more]
XP_022937047.12.1e-0851.55uncharacterized protein LOC111443464 [Cucurbita moschata][more]
XP_008452636.11.1e-06100.00PREDICTED: uncharacterized protein LOC103493595 [Cucumis melo][more]
XP_038899330.19.6e-0693.75uncharacterized protein LOC120086661 [Benincasa hispida] >XP_038899331.1 unchara... [more]
XP_022154397.14.8e-0582.86uncharacterized protein LOC111021399 isoform X1 [Momordica charantia][more]
BLAST of MELO3C032376 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C032376 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IQK44.5e-0946.00uncharacterized protein LOC111477287 OS=Cucurbita maxima OX=3661 GN=LOC111477287... [more]
A0A6J1FA151.0e-0851.55uncharacterized protein LOC111443464 OS=Cucurbita moschata OX=3662 GN=LOC1114434... [more]
A0A1S3BV385.5e-07100.00uncharacterized protein LOC103493595 OS=Cucumis melo OX=3656 GN=LOC103493595 PE=... [more]
A0A6J1DLK42.3e-0582.86uncharacterized protein LOC111021399 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A0A0L2J35.1e-0590.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642400 PE=4 SV=1[more]
BLAST of MELO3C032376 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032376.1MELO3C032376.1mRNA